RNA–Protein interactions for RNA: ENST00000432213.1

SEC13-212, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 594 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-212ENST00000432213 BTDP43251 543 aa17.66■□□□□ 0.42
SEC13-212ENST00000432213 HABP4Q5JVS0 413 aaKnown RBP17.66■□□□□ 0.42
SEC13-212ENST00000432213 TBC1D9Q6ZT07 1266 aa17.66■□□□□ 0.42
SEC13-212ENST00000432213 IDI2Q9BXS1 227 aa17.66■□□□□ 0.42
SEC13-212ENST00000432213 PNMA6EA0A0J9YXQ4 647 aa17.65■□□□□ 0.42
SEC13-212ENST00000432213 SEMA3EO15041 775 aa17.65■□□□□ 0.42
SEC13-212ENST00000432213 SRGAP3O43295 1099 aa17.65■□□□□ 0.42
SEC13-212ENST00000432213 BCAR3O75815 825 aa17.65■□□□□ 0.42
SEC13-212ENST00000432213 TRIM27P14373 513 aa17.65■□□□□ 0.42
SEC13-212ENST00000432213 PSMC4P43686 418 aa17.65■□□□□ 0.42
SEC13-212ENST00000432213 RHBDL3P58872 404 aa17.65■□□□□ 0.42
SEC13-212ENST00000432213 PICALMQ13492 652 aa17.65■□□□□ 0.42
SEC13-212ENST00000432213 RRP1BQ14684 758 aaKnown RBP17.65■□□□□ 0.42
SEC13-212ENST00000432213 HOOK2Q96ED9 719 aa17.65■□□□□ 0.42
SEC13-212ENST00000432213 GNL3LQ9NVN8 582 aaKnown RBP17.65■□□□□ 0.42
SEC13-212ENST00000432213 ABCF2Q9UG63 623 aa17.65■□□□□ 0.42
SEC13-212ENST00000432213 BCRP11274 1271 aa17.64■□□□□ 0.41
SEC13-212ENST00000432213 PTPRAP18433 802 aa17.64■□□□□ 0.41
SEC13-212ENST00000432213 MECOMQ03112 1051 aa17.64■□□□□ 0.41
SEC13-212ENST00000432213 MTX1Q13505 466 aa17.64■□□□□ 0.41
SEC13-212ENST00000432213 SLC4A8Q2Y0W8 1093 aa17.64■□□□□ 0.41
SEC13-212ENST00000432213 DZIP1Q86YF9 867 aaKnown RBP17.64■□□□□ 0.41
SEC13-212ENST00000432213 SCYL3Q8IZE3 742 aa17.64■□□□□ 0.41
SEC13-212ENST00000432213 HMG20BQ9P0W2 317 aa17.64■□□□□ 0.41
SEC13-212ENST00000432213 GABRQQ9UN88 632 aa17.64■□□□□ 0.41
SEC13-212ENST00000432213 MROH7-TTC4A0A0A0MT08 1334 aa17.64■□□□□ 0.41
SEC13-212ENST00000432213 A0A0G2JLL6 359 aaPredicted RBP17.63■□□□□ 0.41
SEC13-212ENST00000432213 ZBTB22O15209 634 aa17.63■□□□□ 0.41
SEC13-212ENST00000432213 ENTPD3O75355 529 aa17.63■□□□□ 0.41
SEC13-212ENST00000432213 CT47B1P0C2W7 299 aaPredicted RBP17.63■□□□□ 0.41
SEC13-212ENST00000432213 MAP3K10Q02779 954 aa17.63■□□□□ 0.41
SEC13-212ENST00000432213 PRKCZQ05513 592 aa17.63■□□□□ 0.41
SEC13-212ENST00000432213 PRRT2Q7Z6L0 340 aaPredicted RBP17.63■□□□□ 0.41
SEC13-212ENST00000432213 TMEM106CQ9BVX2 250 aa17.63■□□□□ 0.41
SEC13-212ENST00000432213 SRRDQ9UH36 339 aa17.63■□□□□ 0.41
SEC13-212ENST00000432213 AFG3L2Q9Y4W6 797 aa17.63■□□□□ 0.41
SEC13-212ENST00000432213 ZHX2Q9Y6X8 837 aa17.63■□□□□ 0.41
SEC13-212ENST00000432213 PDS5AQ29RF7 1337 aaKnown RBP17.63■□□□□ 0.41
SEC13-212ENST00000432213 CLUAP1Q96AJ1 413 aa17.62■□□□□ 0.41
SEC13-212ENST00000432213 MYPNQ86TC9 1320 aa17.62■□□□□ 0.41
SEC13-212ENST00000432213 CEP290O15078 2479 aa17.62■□□□□ 0.41
SEC13-212ENST00000432213 GPR75-ASB3A0A0A6YYF3 556 aa17.61■□□□□ 0.41
SEC13-212ENST00000432213 MCAMP43121 646 aa17.61■□□□□ 0.41
SEC13-212ENST00000432213 KIF22Q14807 665 aa17.61■□□□□ 0.41
SEC13-212ENST00000432213 SHROOM1Q2M3G4 852 aaPredicted RBP17.61■□□□□ 0.41
SEC13-212ENST00000432213 FAM163AQ96GL9 167 aaPredicted RBP17.61■□□□□ 0.41
SEC13-212ENST00000432213 CXCL11O14625 94 aa17.6■□□□□ 0.41
SEC13-212ENST00000432213 FMNL1O95466 1100 aaPredicted RBP17.6■□□□□ 0.41
SEC13-212ENST00000432213 TREML2Q5T2D2 321 aa17.6■□□□□ 0.41
SEC13-212ENST00000432213 GADL1Q6ZQY3 521 aa17.6■□□□□ 0.41
SEC13-212ENST00000432213 NBPF11Q86T75 865 aa17.6■□□□□ 0.41
SEC13-212ENST00000432213 ZSCAN29Q8IWY8 852 aaPredicted RBP17.6■□□□□ 0.41
SEC13-212ENST00000432213 ARHGAP45Q92619 1136 aa17.6■□□□□ 0.41
SEC13-212ENST00000432213 NSUN4Q96CB9 384 aaKnown RBP17.6■□□□□ 0.41
SEC13-212ENST00000432213 NEUROD6Q96NK8 337 aa17.6■□□□□ 0.41
SEC13-212ENST00000432213 COLQQ9Y215 455 aaPredicted RBP17.6■□□□□ 0.41
SEC13-212ENST00000432213 TRIM75PA6NK02 468 aa17.59■□□□□ 0.41
SEC13-212ENST00000432213 H0YGN5 161 aa17.59■□□□□ 0.41
SEC13-212ENST00000432213 ARID4AP29374 1257 aaPredicted RBP17.59■□□□□ 0.41
SEC13-212ENST00000432213 JAG1P78504 1218 aa17.59■□□□□ 0.41
SEC13-212ENST00000432213 SPATA5Q8NB90 893 aa17.59■□□□□ 0.41
SEC13-212ENST00000432213 PARK7Q99497 189 aaKnown RBP17.59■□□□□ 0.41
SEC13-212ENST00000432213 PCDH10Q9P2E7 1040 aa17.59■□□□□ 0.41
SEC13-212ENST00000432213 MYH1P12882 1939 aa17.59■□□□□ 0.41
SEC13-212ENST00000432213 GNAI3P08754 354 aa17.58■□□□□ 0.4
SEC13-212ENST00000432213 GRK4P32298 578 aa17.58■□□□□ 0.4
SEC13-212ENST00000432213 FXR1P51114 621 aaKnown RBP eCLIP17.58■□□□□ 0.4
SEC13-212ENST00000432213 ARHGEF6Q15052 776 aa17.58■□□□□ 0.4
SEC13-212ENST00000432213 ERICH6Q7L0X2 663 aa17.58■□□□□ 0.4
SEC13-212ENST00000432213 UBE2Q1Q7Z7E8 422 aa17.58■□□□□ 0.4
SEC13-212ENST00000432213 ADGRA1Q86SQ6 560 aa17.58■□□□□ 0.4
SEC13-212ENST00000432213 ZGPATQ8N5A5 531 aaKnown RBP17.58■□□□□ 0.4
SEC13-212ENST00000432213 TMEM57Q8N5G2 664 aa17.58■□□□□ 0.4
SEC13-212ENST00000432213 FRAT1Q92837 279 aaPredicted RBP17.58■□□□□ 0.4
SEC13-212ENST00000432213 COL2A1P02458 1487 aaPredicted RBP17.57■□□□□ 0.4
SEC13-212ENST00000432213 PEX10O60683 326 aa17.57■□□□□ 0.4
SEC13-212ENST00000432213 GNRH1P01148 92 aa17.57■□□□□ 0.4
SEC13-212ENST00000432213 CCL5P13501 91 aa17.57■□□□□ 0.4
SEC13-212ENST00000432213 ELNP15502 786 aa17.57■□□□□ 0.4
SEC13-212ENST00000432213 MVPQ14764 893 aaKnown RBP17.57■□□□□ 0.4
SEC13-212ENST00000432213 ATF7IPQ6VMQ6 1270 aa17.57■□□□□ 0.4
SEC13-212ENST00000432213 SH3RF3Q8TEJ3 882 aaPredicted RBP17.57■□□□□ 0.4
SEC13-212ENST00000432213 UNC93B1Q9H1C4 597 aa17.57■□□□□ 0.4
SEC13-212ENST00000432213 C1orf115Q9H7X2 142 aa17.57■□□□□ 0.4
SEC13-212ENST00000432213 PICK1Q9NRD5 415 aa17.57■□□□□ 0.4
SEC13-212ENST00000432213 SNRKQ9NRH2 765 aa17.57■□□□□ 0.4
SEC13-212ENST00000432213 TRIOBPQ9H2D6 2365 aa17.57■□□□□ 0.4
SEC13-212ENST00000432213 DDX60LQ5H9U9 1706 aaKnown RBP17.56■□□□□ 0.4
SEC13-212ENST00000432213 CCER2I3L3R5 266 aa17.56■□□□□ 0.4
SEC13-212ENST00000432213 CTNND1O60716 968 aaKnown RBP17.56■□□□□ 0.4
SEC13-212ENST00000432213 PRMT2P55345 433 aa17.56■□□□□ 0.4
SEC13-212ENST00000432213 RAET1EQ8TD07 263 aa17.56■□□□□ 0.4
SEC13-212ENST00000432213 OSBPL5Q9H0X9 879 aaPredicted RBP17.56■□□□□ 0.4
SEC13-212ENST00000432213 AKAP2Q9Y2D5 859 aa17.56■□□□□ 0.4
SEC13-212ENST00000432213 FCGRTP55899 365 aa17.55■□□□□ 0.4
SEC13-212ENST00000432213 POLA2Q14181 598 aa17.55■□□□□ 0.4
SEC13-212ENST00000432213 GCC1Q96CN9 775 aa17.55■□□□□ 0.4
SEC13-212ENST00000432213 DBNDD2Q9BQY9 259 aa17.55■□□□□ 0.4
SEC13-212ENST00000432213 DNAJC18Q9H819 358 aa17.55■□□□□ 0.4
SEC13-212ENST00000432213 TLR7Q9NYK1 1049 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms