RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 A0A1W2PQD8 194 aa12.31□□□□□ -0.44
USP6NL-202ENST00000379237 AP1G2O75843 785 aa12.31□□□□□ -0.44
USP6NL-202ENST00000379237 NNTQ13423 1086 aa12.31□□□□□ -0.44
USP6NL-202ENST00000379237 TFRCP02786 760 aaKnown RBP12.3□□□□□ -0.44
USP6NL-202ENST00000379237 PCK1P35558 622 aa12.3□□□□□ -0.44
USP6NL-202ENST00000379237 RBL2Q08999 1139 aa12.3□□□□□ -0.44
USP6NL-202ENST00000379237 GNPTABQ3T906 1256 aa12.3□□□□□ -0.44
USP6NL-202ENST00000379237 DHX32Q7L7V1 743 aaKnown RBP12.3□□□□□ -0.44
USP6NL-202ENST00000379237 JAKMIP2Q96AA8 810 aa12.3□□□□□ -0.44
USP6NL-202ENST00000379237 VPS16Q9H269 839 aa12.3□□□□□ -0.44
USP6NL-202ENST00000379237 VIPAS39Q9H9C1 493 aa12.3□□□□□ -0.44
USP6NL-202ENST00000379237 WWC3Q9ULE0 1092 aa12.3□□□□□ -0.44
USP6NL-202ENST00000379237 CDHR2Q9BYE9 1310 aa12.3□□□□□ -0.44
USP6NL-202ENST00000379237 ATP10DQ9P241 1426 aa12.3□□□□□ -0.44
USP6NL-202ENST00000379237 ATP10AO60312 1499 aa12.3□□□□□ -0.44
USP6NL-202ENST00000379237 CASP14P31944 242 aa12.3□□□□□ -0.44
USP6NL-202ENST00000379237 NBPF6Q5VWK0 638 aa12.3□□□□□ -0.44
USP6NL-202ENST00000379237 NBPF5PQ86XG9 351 aaPredicted RBP12.3□□□□□ -0.44
USP6NL-202ENST00000379237 MAP4K1Q92918 833 aa12.3□□□□□ -0.44
USP6NL-202ENST00000379237 NBPF4Q96M43 638 aa12.3□□□□□ -0.44
USP6NL-202ENST00000379237 SLC40A1Q9NP59 571 aa12.3□□□□□ -0.44
USP6NL-202ENST00000379237 PCDHA5Q9Y5H7 936 aa12.3□□□□□ -0.44
USP6NL-202ENST00000379237 A0A0D9SFI3 127 aa12.3□□□□□ -0.44
USP6NL-202ENST00000379237 CHL1O00533 1208 aa12.3□□□□□ -0.44
USP6NL-202ENST00000379237 RANBP1P43487 201 aa12.3□□□□□ -0.44
USP6NL-202ENST00000379237 CCDC129Q6ZRS4 1044 aa12.3□□□□□ -0.44
USP6NL-202ENST00000379237 MSANTD4Q8NCY6 345 aa12.3□□□□□ -0.44
USP6NL-202ENST00000379237 PI4K2BQ8TCG2 481 aa12.3□□□□□ -0.44
USP6NL-202ENST00000379237 RPGRIP1Q96KN7 1286 aa12.3□□□□□ -0.44
USP6NL-202ENST00000379237 UBXN6Q9BZV1 441 aa12.3□□□□□ -0.44
USP6NL-202ENST00000379237 TMX4Q9H1E5 349 aaPredicted RBP12.3□□□□□ -0.44
USP6NL-202ENST00000379237 ACTR5Q9H9F9 607 aaPredicted RBP12.3□□□□□ -0.44
USP6NL-202ENST00000379237 KCNH3Q9ULD8 1083 aa12.3□□□□□ -0.44
USP6NL-202ENST00000379237 ADGRG1Q9Y653 693 aa12.3□□□□□ -0.44
USP6NL-202ENST00000379237 SRGAP2O75044 1071 aa12.3□□□□□ -0.44
USP6NL-202ENST00000379237 C8orf74Q6P047 294 aa12.3□□□□□ -0.44
USP6NL-202ENST00000379237 BPIFA3Q9BQP9 254 aa12.3□□□□□ -0.44
USP6NL-202ENST00000379237 KIF5AQ12840 1032 aa12.29□□□□□ -0.44
USP6NL-202ENST00000379237 MYSM1Q5VVJ2 828 aa12.29□□□□□ -0.44
USP6NL-202ENST00000379237 BRAPQ7Z569 592 aa12.29□□□□□ -0.44
USP6NL-202ENST00000379237 KLF18A0A0U1RQI7 1052 aa12.29□□□□□ -0.44
USP6NL-202ENST00000379237 MYO1BO43795 1136 aa12.29□□□□□ -0.44
USP6NL-202ENST00000379237 CYLC1P35663 651 aaPredicted RBP12.29□□□□□ -0.44
USP6NL-202ENST00000379237 GUCY2FP51841 1108 aa12.29□□□□□ -0.44
USP6NL-202ENST00000379237 KRT83P78385 493 aa12.29□□□□□ -0.44
USP6NL-202ENST00000379237 MXRA7P84157 204 aa12.29□□□□□ -0.44
USP6NL-202ENST00000379237 TTC39AQ5SRH9 613 aa12.29□□□□□ -0.44
USP6NL-202ENST00000379237 SPAG5Q96R06 1193 aa12.29□□□□□ -0.44
USP6NL-202ENST00000379237 HAUS2Q9NVX0 235 aa12.29□□□□□ -0.44
USP6NL-202ENST00000379237 PDHBP11177 359 aa12.29□□□□□ -0.44
USP6NL-202ENST00000379237 HAND2P61296 217 aa12.29□□□□□ -0.44
USP6NL-202ENST00000379237 TOB2Q14106 344 aaPredicted RBP12.29□□□□□ -0.44
USP6NL-202ENST00000379237 ETAA1Q9NY74 926 aa12.29□□□□□ -0.44
USP6NL-202ENST00000379237 RTEL1Q9NZ71 1219 aa12.29□□□□□ -0.44
USP6NL-202ENST00000379237 G3BP2Q9UN86 482 aaKnown RBP12.29□□□□□ -0.44
USP6NL-202ENST00000379237 USP14P54578 494 aa12.29□□□□□ -0.44
USP6NL-202ENST00000379237 GUCY1A3Q02108 690 aa12.29□□□□□ -0.44
USP6NL-202ENST00000379237 NBPF14Q5TI25 921 aa12.29□□□□□ -0.44
USP6NL-202ENST00000379237 SH2D3CQ8N5H7 860 aa12.29□□□□□ -0.44
USP6NL-202ENST00000379237 LINC00301Q8NCQ3 95 aa12.29□□□□□ -0.44
USP6NL-202ENST00000379237 ALS2CR12Q96Q35 445 aa12.29□□□□□ -0.44
USP6NL-202ENST00000379237 RAB21Q9UL25 225 aa12.29□□□□□ -0.44
USP6NL-202ENST00000379237 FAM184BQ9ULE4 1060 aa12.29□□□□□ -0.44
USP6NL-202ENST00000379237 UHRF1BP1LA0JNW5 1464 aa12.28□□□□□ -0.44
USP6NL-202ENST00000379237 ABCC10Q5T3U5 1492 aa12.28□□□□□ -0.44
USP6NL-202ENST00000379237 PI4KAP2A4QPH2 592 aa12.28□□□□□ -0.44
USP6NL-202ENST00000379237 CMA1P23946 247 aa12.28□□□□□ -0.44
USP6NL-202ENST00000379237 USP5P45974 858 aa12.28□□□□□ -0.44
USP6NL-202ENST00000379237 C2orf54Q08AI8 447 aa12.28□□□□□ -0.44
USP6NL-202ENST00000379237 ZNF513Q8N8E2 541 aaPredicted RBP12.28□□□□□ -0.44
USP6NL-202ENST00000379237 PI4KAP1Q8N8J0 262 aa12.28□□□□□ -0.44
USP6NL-202ENST00000379237 MLKLQ8NB16 471 aa12.28□□□□□ -0.44
USP6NL-202ENST00000379237 C19orf44Q9H6X5 657 aa12.28□□□□□ -0.44
USP6NL-202ENST00000379237 TPX2Q9ULW0 747 aaKnown RBP12.28□□□□□ -0.44
USP6NL-202ENST00000379237 TACC1O75410 805 aa12.28□□□□□ -0.44
USP6NL-202ENST00000379237 PREPLQ4J6C6 727 aaPredicted RBP12.28□□□□□ -0.44
USP6NL-202ENST00000379237 AMOTL1Q8IY63 956 aa12.28□□□□□ -0.44
USP6NL-202ENST00000379237 CCDC13Q8IYE1 715 aa12.28□□□□□ -0.44
USP6NL-202ENST00000379237 SSH3Q8TE77 659 aa12.28□□□□□ -0.44
USP6NL-202ENST00000379237 CCDC43Q96MW1 224 aaKnown RBP12.28□□□□□ -0.44
USP6NL-202ENST00000379237 TSC22D3Q99576 134 aa12.28□□□□□ -0.44
USP6NL-202ENST00000379237 UBAC1Q9BSL1 405 aa12.28□□□□□ -0.44
USP6NL-202ENST00000379237 NBPF3Q9H094 633 aa12.28□□□□□ -0.44
USP6NL-202ENST00000379237 ZRANB1Q9UGI0 708 aa12.28□□□□□ -0.44
USP6NL-202ENST00000379237 TULP1O00294 542 aaPredicted RBP12.28□□□□□ -0.44
USP6NL-202ENST00000379237 NEXNQ0ZGT2 675 aa12.28□□□□□ -0.44
USP6NL-202ENST00000379237 GRIPAP1Q4V328 841 aa12.28□□□□□ -0.44
USP6NL-202ENST00000379237 KCNV1Q6PIU1 500 aa12.28□□□□□ -0.44
USP6NL-202ENST00000379237 DDX46Q7L014 1031 aaKnown RBP12.28□□□□□ -0.44
USP6NL-202ENST00000379237 CCDC170Q8IYT3 715 aa12.28□□□□□ -0.44
USP6NL-202ENST00000379237 CCDC63Q8NA47 563 aa12.28□□□□□ -0.44
USP6NL-202ENST00000379237 PPP1R12CQ9BZL4 782 aa12.28□□□□□ -0.44
USP6NL-202ENST00000379237 USP44Q9H0E7 712 aa12.28□□□□□ -0.44
USP6NL-202ENST00000379237 SUDS3Q9H7L9 328 aaPredicted RBP12.28□□□□□ -0.44
USP6NL-202ENST00000379237 HDAC6Q9UBN7 1215 aa12.28□□□□□ -0.44
USP6NL-202ENST00000379237 MYOM2P54296 1465 aa12.28□□□□□ -0.44
USP6NL-202ENST00000379237 ANXA1P04083 346 aa12.27□□□□□ -0.44
USP6NL-202ENST00000379237 TRIM21P19474 475 aaKnown RBP12.27□□□□□ -0.44
USP6NL-202ENST00000379237 UBXN1Q04323 297 aa12.27□□□□□ -0.44
USP6NL-202ENST00000379237 GKAP1Q5VSY0 366 aaPredicted RBP12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms