RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 SASH1O94885 1247 aa19.01■□□□□ 0.63
VARS-215ENST00000375663 BAG3O95817 575 aa19.01■□□□□ 0.63
VARS-215ENST00000375663 KRT9P35527 623 aa19.01■□□□□ 0.63
VARS-215ENST00000375663 MNAT1P51948 309 aa19.01■□□□□ 0.63
VARS-215ENST00000375663 WWC2Q6AWC2 1192 aa19.01■□□□□ 0.63
VARS-215ENST00000375663 DTHD1Q6ZMT9 781 aa19.01■□□□□ 0.63
VARS-215ENST00000375663 FGAP02671 866 aa19■□□□□ 0.63
VARS-215ENST00000375663 IL2RBP14784 551 aa19■□□□□ 0.63
VARS-215ENST00000375663 RASSF4Q9H2L5 321 aa19■□□□□ 0.63
VARS-215ENST00000375663 RNF17Q9BXT8 1623 aaKnown RBP19■□□□□ 0.63
VARS-215ENST00000375663 OPA1O60313 960 aa19■□□□□ 0.63
VARS-215ENST00000375663 NEFHP12036 1026 aa19■□□□□ 0.63
VARS-215ENST00000375663 TUBB2AQ13885 445 aa19■□□□□ 0.63
VARS-215ENST00000375663 DZIP3Q86Y13 1208 aaKnown RBP19■□□□□ 0.63
VARS-215ENST00000375663 DYDC1Q8WWB3 177 aa19■□□□□ 0.63
VARS-215ENST00000375663 TUBB2BQ9BVA1 445 aa19■□□□□ 0.63
VARS-215ENST00000375663 V9GY48 417 aaPredicted RBP19■□□□□ 0.63
VARS-215ENST00000375663 EBAG9O00559 213 aa19■□□□□ 0.63
VARS-215ENST00000375663 LDHCP07864 332 aa19■□□□□ 0.63
VARS-215ENST00000375663 RESTQ13127 1097 aa19■□□□□ 0.63
VARS-215ENST00000375663 SMC1AQ14683 1233 aaKnown RBP19■□□□□ 0.63
VARS-215ENST00000375663 GPR161Q8N6U8 529 aaKnown RBP19■□□□□ 0.63
VARS-215ENST00000375663 DESI2Q9BSY9 194 aa19■□□□□ 0.63
VARS-215ENST00000375663 GOPCQ9HD26 462 aa19■□□□□ 0.63
VARS-215ENST00000375663 SERTAD1Q9UHV2 236 aa19■□□□□ 0.63
VARS-215ENST00000375663 ZCCHC11Q5TAX3 1644 aaKnown RBP18.99■□□□□ 0.63
VARS-215ENST00000375663 ZPR1O75312 459 aa18.99■□□□□ 0.63
VARS-215ENST00000375663 GIMAP7Q8NHV1 300 aa18.99■□□□□ 0.63
VARS-215ENST00000375663 SPAG5Q96R06 1193 aa18.99■□□□□ 0.63
VARS-215ENST00000375663 RBM5P52756 815 aaKnown RBP eCLIP18.99■□□□□ 0.63
VARS-215ENST00000375663 TMTC1Q8IUR5 882 aa18.99■□□□□ 0.63
VARS-215ENST00000375663 C19orf44Q9H6X5 657 aa18.99■□□□□ 0.63
VARS-215ENST00000375663 PPP2R2CQ9Y2T4 447 aa18.99■□□□□ 0.63
VARS-215ENST00000375663 ROBO2Q9HCK4 1378 aa18.99■□□□□ 0.63
VARS-215ENST00000375663 TSPY3P0CV98 308 aa18.99■□□□□ 0.63
VARS-215ENST00000375663 TSPY8P0CW00 308 aa18.99■□□□□ 0.63
VARS-215ENST00000375663 PRPF4BQ13523 1007 aaKnown RBP18.99■□□□□ 0.63
VARS-215ENST00000375663 UTP14CQ5TAP6 766 aaKnown RBP18.99■□□□□ 0.63
VARS-215ENST00000375663 CYP26C1Q6V0L0 522 aa18.99■□□□□ 0.63
VARS-215ENST00000375663 STAMQ92783 540 aa18.99■□□□□ 0.63
VARS-215ENST00000375663 SPTLC3Q9NUV7 552 aa18.99■□□□□ 0.63
VARS-215ENST00000375663 ZNF532Q9HCE3 1301 aa18.98■□□□□ 0.63
VARS-215ENST00000375663 PRAMEF22A3QJZ6 481 aa18.98■□□□□ 0.63
VARS-215ENST00000375663 DNAJC21Q5F1R6 531 aaKnown RBP18.98■□□□□ 0.63
VARS-215ENST00000375663 E9PCH4 1651 aa18.98■□□□□ 0.63
VARS-215ENST00000375663 GLI2P10070 1586 aa18.98■□□□□ 0.63
VARS-215ENST00000375663 BICDL2A1A5D9 508 aa18.98■□□□□ 0.63
VARS-215ENST00000375663 TBC1D8BQ0IIM8 1120 aa18.98■□□□□ 0.63
VARS-215ENST00000375663 ZNF827Q17R98 1081 aa18.98■□□□□ 0.63
VARS-215ENST00000375663 SPTY2D1Q68D10 685 aaPredicted RBP18.98■□□□□ 0.63
VARS-215ENST00000375663 PPP1R13BQ96KQ4 1090 aa18.98■□□□□ 0.63
VARS-215ENST00000375663 CTDSPL2Q05D32 466 aa18.98■□□□□ 0.63
VARS-215ENST00000375663 LRRC27Q9C0I9 530 aa18.98■□□□□ 0.63
VARS-215ENST00000375663 ABCC3O15438 1527 aa18.98■□□□□ 0.63
VARS-215ENST00000375663 MACROD2A1Z1Q3 448 aa18.97■□□□□ 0.63
VARS-215ENST00000375663 EFCAB8A8MWE9 144 aa18.97■□□□□ 0.63
VARS-215ENST00000375663 TRIM14Q14142 442 aa18.97■□□□□ 0.63
VARS-215ENST00000375663 LRRC24Q50LG9 513 aa18.97■□□□□ 0.63
VARS-215ENST00000375663 CLIC6Q96NY7 704 aa18.97■□□□□ 0.63
VARS-215ENST00000375663 NAPAP54920 295 aa18.97■□□□□ 0.63
VARS-215ENST00000375663 MICALL1Q8N3F8 863 aa18.97■□□□□ 0.63
VARS-215ENST00000375663 ATRIPQ8WXE1 791 aa18.97■□□□□ 0.63
VARS-215ENST00000375663 NIP7Q9Y221 180 aaKnown RBP eCLIP18.97■□□□□ 0.63
VARS-215ENST00000375663 PCDHA5Q9Y5H7 936 aa18.97■□□□□ 0.63
VARS-215ENST00000375663 IQSEC2Q5JU85 1478 aa18.97■□□□□ 0.63
VARS-215ENST00000375663 PUM3Q15397 648 aaKnown RBP18.96■□□□□ 0.63
VARS-215ENST00000375663 TAB2Q9NYJ8 693 aa18.96■□□□□ 0.63
VARS-215ENST00000375663 PPP1R1BQ9UD71 204 aaPredicted RBP18.96■□□□□ 0.63
VARS-215ENST00000375663 NCOA3Q9Y6Q9 1424 aa18.96■□□□□ 0.63
VARS-215ENST00000375663 PRDM1O75626 825 aa18.96■□□□□ 0.63
VARS-215ENST00000375663 ARID5BQ14865 1188 aa18.96■□□□□ 0.63
VARS-215ENST00000375663 LONRF3Q496Y0 759 aa18.96■□□□□ 0.63
VARS-215ENST00000375663 ZMYM1Q5SVZ6 1142 aa18.96■□□□□ 0.63
VARS-215ENST00000375663 PCDH11XQ9BZA7 1347 aa18.96■□□□□ 0.63
VARS-215ENST00000375663 PCDH11YQ9BZA8 1340 aa18.96■□□□□ 0.63
VARS-215ENST00000375663 NOSTRINQ8IVI9 506 aa18.96■□□□□ 0.63
VARS-215ENST00000375663 SLF1Q9BQI6 1058 aa18.96■□□□□ 0.63
VARS-215ENST00000375663 RBM28Q9NW13 759 aaKnown RBP18.96■□□□□ 0.63
VARS-215ENST00000375663 CARMIL3Q8ND23 1372 aa18.96■□□□□ 0.63
VARS-215ENST00000375663 VAV2P52735 878 aa18.96■□□□□ 0.63
VARS-215ENST00000375663 ARID5AQ03989 594 aa18.96■□□□□ 0.63
VARS-215ENST00000375663 PAK1Q13153 545 aa18.96■□□□□ 0.63
VARS-215ENST00000375663 SEPT7Q16181 437 aaKnown RBP18.96■□□□□ 0.63
VARS-215ENST00000375663 LINC00301Q8NCQ3 95 aa18.96■□□□□ 0.63
VARS-215ENST00000375663 FAM76AQ8TAV0 307 aa18.96■□□□□ 0.63
VARS-215ENST00000375663 TTC38Q5R3I4 469 aa18.95■□□□□ 0.62
VARS-215ENST00000375663 PIK3AP1Q6ZUJ8 805 aa18.95■□□□□ 0.62
VARS-215ENST00000375663 SLC39A14Q15043 492 aa18.95■□□□□ 0.62
VARS-215ENST00000375663 TTLL7Q6ZT98 887 aa18.95■□□□□ 0.62
VARS-215ENST00000375663 MCM9Q9NXL9 1143 aa18.95■□□□□ 0.62
VARS-215ENST00000375663 BTBD18B2RXH4 712 aa18.95■□□□□ 0.62
VARS-215ENST00000375663 ADAMTS2O95450 1211 aa18.95■□□□□ 0.62
VARS-215ENST00000375663 GTF2A1P52655 376 aaPredicted RBP18.95■□□□□ 0.62
VARS-215ENST00000375663 CRACR2BQ8N4Y2 399 aaPredicted RBP18.95■□□□□ 0.62
VARS-215ENST00000375663 POLR3EQ9NVU0 708 aa18.95■□□□□ 0.62
VARS-215ENST00000375663 ZEB2O60315 1214 aa18.94■□□□□ 0.62
VARS-215ENST00000375663 MAP2K1Q02750 393 aaPredicted RBP18.94■□□□□ 0.62
VARS-215ENST00000375663 NCBP1Q09161 790 aaKnown RBP18.94■□□□□ 0.62
VARS-215ENST00000375663 PGBD1Q96JS3 809 aa18.94■□□□□ 0.62
VARS-215ENST00000375663 QRICH2Q9H0J4 1663 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms