RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 KRT40Q6A162 431 aa16.97■□□□□ 0.31
SMG8-201ENST00000300917 CPLX2Q6PUV4 134 aaKnown RBP16.97■□□□□ 0.31
SMG8-201ENST00000300917 TMEM87BQ96K49 555 aa16.97■□□□□ 0.31
SMG8-201ENST00000300917 RIOK1Q9BRS2 568 aaKnown RBP16.97■□□□□ 0.31
SMG8-201ENST00000300917 NMT2O60551 498 aa16.97■□□□□ 0.31
SMG8-201ENST00000300917 GRIK5Q16478 980 aa16.97■□□□□ 0.31
SMG8-201ENST00000300917 FAM47AQ5JRC9 791 aa16.97■□□□□ 0.31
SMG8-201ENST00000300917 FBXO33Q7Z6M2 555 aa16.97■□□□□ 0.31
SMG8-201ENST00000300917 FUCA2Q9BTY2 467 aa16.97■□□□□ 0.31
SMG8-201ENST00000300917 DNAJC25Q9H1X3 360 aa16.97■□□□□ 0.31
SMG8-201ENST00000300917 FAM217BQ9NTX9 383 aaPredicted RBP16.97■□□□□ 0.31
SMG8-201ENST00000300917 AP5Z1O43299 807 aa16.96■□□□□ 0.31
SMG8-201ENST00000300917 KRT23Q9C075 422 aa16.96■□□□□ 0.31
SMG8-201ENST00000300917 PCDHA7Q9UN72 937 aa16.96■□□□□ 0.31
SMG8-201ENST00000300917 GNAT2P19087 354 aa16.96■□□□□ 0.31
SMG8-201ENST00000300917 CCDC73Q6ZRK6 1079 aa16.96■□□□□ 0.31
SMG8-201ENST00000300917 DZIP1Q86YF9 867 aaKnown RBP16.96■□□□□ 0.31
SMG8-201ENST00000300917 RPGRQ92834 1020 aaKnown RBP16.96■□□□□ 0.31
SMG8-201ENST00000300917 NSUN4Q96CB9 384 aaKnown RBP16.96■□□□□ 0.31
SMG8-201ENST00000300917 PDLIM2Q96JY6 352 aa16.96■□□□□ 0.31
SMG8-201ENST00000300917 SART3Q15020 963 aaKnown RBP16.95■□□□□ 0.3
SMG8-201ENST00000300917 PRR5LQ6MZQ0 368 aa16.95■□□□□ 0.3
SMG8-201ENST00000300917 RCOR1Q9UKL0 485 aa16.95■□□□□ 0.3
SMG8-201ENST00000300917 MRVI1Q9Y6F6 885 aa16.95■□□□□ 0.3
SMG8-201ENST00000300917 BTAF1O14981 1849 aa16.95■□□□□ 0.3
SMG8-201ENST00000300917 PNPLA7Q6ZV29 1317 aa16.95■□□□□ 0.3
SMG8-201ENST00000300917 KIF23Q02241 960 aaPredicted RBP16.95■□□□□ 0.3
SMG8-201ENST00000300917 MYSM1Q5VVJ2 828 aa16.95■□□□□ 0.3
SMG8-201ENST00000300917 CLSTN2Q9H4D0 955 aa16.95■□□□□ 0.3
SMG8-201ENST00000300917 CNNM2Q9H8M5 875 aa16.95■□□□□ 0.3
SMG8-201ENST00000300917 TNKSO95271 1327 aa16.95■□□□□ 0.3
SMG8-201ENST00000300917 SASS6Q6UVJ0 657 aa16.95■□□□□ 0.3
SMG8-201ENST00000300917 ZSCAN30Q86W11 494 aa16.95■□□□□ 0.3
SMG8-201ENST00000300917 FBXL16Q8N461 479 aa16.95■□□□□ 0.3
SMG8-201ENST00000300917 NAP1L5Q96NT1 182 aaPredicted RBP16.95■□□□□ 0.3
SMG8-201ENST00000300917 RTN1Q16799 776 aa16.94■□□□□ 0.3
SMG8-201ENST00000300917 KLHL34Q8N239 644 aa16.94■□□□□ 0.3
SMG8-201ENST00000300917 STAG1Q8WVM7 1258 aa16.94■□□□□ 0.3
SMG8-201ENST00000300917 DDX19AQ9NUU7 478 aaKnown RBP16.94■□□□□ 0.3
SMG8-201ENST00000300917 ANKRD2Q9GZV1 360 aa16.94■□□□□ 0.3
SMG8-201ENST00000300917 SERPINB2P05120 415 aa16.94■□□□□ 0.3
SMG8-201ENST00000300917 SSRP1Q08945 709 aaKnown RBP16.94■□□□□ 0.3
SMG8-201ENST00000300917 TRIM29Q14134 588 aa16.94■□□□□ 0.3
SMG8-201ENST00000300917 ISM2Q6H9L7 571 aa16.94■□□□□ 0.3
SMG8-201ENST00000300917 COL5A3P25940 1745 aaPredicted RBP16.93■□□□□ 0.3
SMG8-201ENST00000300917 KINO60870 393 aaKnown RBP16.93■□□□□ 0.3
SMG8-201ENST00000300917 GYS1P13807 737 aa16.93■□□□□ 0.3
SMG8-201ENST00000300917 NTRK3Q16288 839 aa16.93■□□□□ 0.3
SMG8-201ENST00000300917 BCL11BQ9C0K0 894 aaPredicted RBP16.93■□□□□ 0.3
SMG8-201ENST00000300917 USP17L8P0C7I0 530 aa16.93■□□□□ 0.3
SMG8-201ENST00000300917 CLCN1P35523 988 aa16.93■□□□□ 0.3
SMG8-201ENST00000300917 SPECC1Q5M775 1068 aa16.93■□□□□ 0.3
SMG8-201ENST00000300917 CTR9Q6PD62 1173 aa16.93■□□□□ 0.3
SMG8-201ENST00000300917 OLFM4Q6UX06 510 aa16.93■□□□□ 0.3
SMG8-201ENST00000300917 ZNF654Q8IZM8 581 aa16.93■□□□□ 0.3
SMG8-201ENST00000300917 SDF4Q9BRK5 362 aa16.93■□□□□ 0.3
SMG8-201ENST00000300917 TTC12Q9H892 705 aaPredicted RBP16.93■□□□□ 0.3
SMG8-201ENST00000300917 CDKL5O76039 1030 aa16.92■□□□□ 0.3
SMG8-201ENST00000300917 UFL1O94874 794 aa16.92■□□□□ 0.3
SMG8-201ENST00000300917 LINC00301Q8NCQ3 95 aa16.92■□□□□ 0.3
SMG8-201ENST00000300917 ESR2Q92731 530 aa16.92■□□□□ 0.3
SMG8-201ENST00000300917 MCM9Q9NXL9 1143 aa16.92■□□□□ 0.3
SMG8-201ENST00000300917 BTBD18B2RXH4 712 aa16.92■□□□□ 0.3
SMG8-201ENST00000300917 BIN1O00499 593 aa16.92■□□□□ 0.3
SMG8-201ENST00000300917 SPTLC2O15270 562 aa16.92■□□□□ 0.3
SMG8-201ENST00000300917 NDUFA8P51970 172 aa16.92■□□□□ 0.3
SMG8-201ENST00000300917 RNF41Q9H4P4 317 aaPredicted RBP16.92■□□□□ 0.3
SMG8-201ENST00000300917 GPSM2P81274 684 aa16.92■□□□□ 0.3
SMG8-201ENST00000300917 GRAPQ13588 217 aa16.92■□□□□ 0.3
SMG8-201ENST00000300917 SGMS1Q86VZ5 419 aa16.92■□□□□ 0.3
SMG8-201ENST00000300917 GRAPLQ8TC17 118 aaPredicted RBP16.92■□□□□ 0.3
SMG8-201ENST00000300917 CBX8Q9HC52 389 aa16.92■□□□□ 0.3
SMG8-201ENST00000300917 BAZ2BQ9UIF8 2168 aaKnown RBP16.92■□□□□ 0.3
SMG8-201ENST00000300917 RIMBP2O15034 1052 aa16.91■□□□□ 0.3
SMG8-201ENST00000300917 LIFRP42702 1097 aa16.91■□□□□ 0.3
SMG8-201ENST00000300917 KRT27Q7Z3Y8 459 aa16.91■□□□□ 0.3
SMG8-201ENST00000300917 C17orf53Q8N3J3 647 aaPredicted RBP16.91■□□□□ 0.3
SMG8-201ENST00000300917 DYNLL2Q96FJ2 89 aa16.91■□□□□ 0.3
SMG8-201ENST00000300917 CLIC6Q96NY7 704 aa16.91■□□□□ 0.3
SMG8-201ENST00000300917 SAP30BPQ9UHR5 308 aaKnown RBP16.91■□□□□ 0.3
SMG8-201ENST00000300917 ENAHQ8N8S7 591 aaPredicted RBP16.91■□□□□ 0.3
SMG8-201ENST00000300917 WDR19Q8NEZ3 1342 aa16.91■□□□□ 0.3
SMG8-201ENST00000300917 C6orf229H3BNL8 230 aa16.9■□□□□ 0.3
SMG8-201ENST00000300917 NR5A1Q13285 461 aa16.9■□□□□ 0.3
SMG8-201ENST00000300917 ANO1Q5XXA6 986 aa16.9■□□□□ 0.3
SMG8-201ENST00000300917 DCP1AQ9NPI6 582 aaPredicted RBP16.9■□□□□ 0.3
SMG8-201ENST00000300917 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.9■□□□□ 0.3
SMG8-201ENST00000300917 RREB1Q92766 1687 aa16.9■□□□□ 0.3
SMG8-201ENST00000300917 USP5P45974 858 aa16.9■□□□□ 0.3
SMG8-201ENST00000300917 ZNF165P49910 485 aa16.9■□□□□ 0.3
SMG8-201ENST00000300917 SNW1Q13573 536 aaKnown RBP16.9■□□□□ 0.3
SMG8-201ENST00000300917 IFIT1BQ5T764 474 aaKnown RBP16.9■□□□□ 0.3
SMG8-201ENST00000300917 FANCBQ8NB91 859 aa16.9■□□□□ 0.3
SMG8-201ENST00000300917 MSL1Q68DK7 614 aa16.9■□□□□ 0.3
SMG8-201ENST00000300917 FAM200AQ8TCP9 573 aa16.9■□□□□ 0.3
SMG8-201ENST00000300917 MRPS27Q92552 414 aaKnown RBP16.9■□□□□ 0.3
SMG8-201ENST00000300917 CRNKL1Q9BZJ0 848 aaKnown RBP16.9■□□□□ 0.3
SMG8-201ENST00000300917 RTEL1Q9NZ71 1219 aa16.9■□□□□ 0.3
SMG8-201ENST00000300917 F8W031 263 aaPredicted RBP16.89■□□□□ 0.29
SMG8-201ENST00000300917 PLEKHA8P1O95397 391 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms