RNA–Protein interactions for RNA: ENST00000523622.1

NPM1-211, Transcript of nucleophosmin 1, humanhuman

TSL 3

Gene NPM1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-211ENST00000523622 ZNF326Q5BKZ1 582 aaKnown RBP9.37□□□□□ -0.91
NPM1-211ENST00000523622 KCTD17Q8N5Z5 321 aa9.37□□□□□ -0.91
NPM1-211ENST00000523622 RGS22Q8NE09 1264 aa9.37□□□□□ -0.91
NPM1-211ENST00000523622 TICAM2Q86XR7 235 aa9.34□□□□□ -0.91
NPM1-211ENST00000523622 MTMR7Q9Y216 660 aa9.3□□□□□ -0.92
NPM1-211ENST00000523622 ZNF428Q96B54 188 aa9.29□□□□□ -0.92
NPM1-211ENST00000523622 RBM25P49756 843 aaKnown RBP9.28□□□□□ -0.92
NPM1-211ENST00000523622 ZNF692Q9BU19 519 aaPredicted RBP9.28□□□□□ -0.92
NPM1-211ENST00000523622 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.28□□□□□ -0.92
NPM1-211ENST00000523622 CLSTN1O94985 981 aa9.27□□□□□ -0.93
NPM1-211ENST00000523622 ZNF592Q92610 1267 aa9.26□□□□□ -0.93
NPM1-211ENST00000523622 SENP3Q9H4L4 574 aaPredicted RBP9.26□□□□□ -0.93
NPM1-211ENST00000523622 NEUROD2Q15784 382 aa9.25□□□□□ -0.93
NPM1-211ENST00000523622 CCDC136Q96JN2 1154 aa9.25□□□□□ -0.93
NPM1-211ENST00000523622 ZFP91Q96JP5 570 aaPredicted RBP9.25□□□□□ -0.93
NPM1-211ENST00000523622 BRPF3Q9ULD4 1205 aa9.25□□□□□ -0.93
NPM1-211ENST00000523622 FOXD4L5Q5VV16 416 aaPredicted RBP9.23□□□□□ -0.93
NPM1-211ENST00000523622 IFNLR1Q8IU57 520 aaPredicted RBP9.23□□□□□ -0.93
NPM1-211ENST00000523622 FAM177A1Q8N128 213 aaPredicted RBP9.23□□□□□ -0.93
NPM1-211ENST00000523622 FOXD4L4Q8WXT5 416 aaPredicted RBP9.23□□□□□ -0.93
NPM1-211ENST00000523622 PSMD1Q99460 953 aa9.23□□□□□ -0.93
NPM1-211ENST00000523622 ARID3CA6NKF2 412 aa9.22□□□□□ -0.93
NPM1-211ENST00000523622 IRX6P78412 446 aaPredicted RBP9.22□□□□□ -0.93
NPM1-211ENST00000523622 USP35Q9P2H5 1018 aa9.22□□□□□ -0.93
NPM1-211ENST00000523622 CERS3Q8IU89 383 aa9.21□□□□□ -0.94
NPM1-211ENST00000523622 ZEB1P37275 1124 aaPredicted RBP9.2□□□□□ -0.94
NPM1-211ENST00000523622 CWC22Q9HCG8 908 aaKnown RBP9.2□□□□□ -0.94
NPM1-211ENST00000523622 VASPP50552 380 aaPredicted RBP9.19□□□□□ -0.94
NPM1-211ENST00000523622 CC2D2BQ6DHV5 1058 aa9.19□□□□□ -0.94
NPM1-211ENST00000523622 APBB1O00213 710 aa9.18□□□□□ -0.94
NPM1-211ENST00000523622 ATXN8OSP0DMR3 200 aa9.18□□□□□ -0.94
NPM1-211ENST00000523622 NAP1L5Q96NT1 182 aaPredicted RBP9.17□□□□□ -0.94
NPM1-211ENST00000523622 TMED8Q6PL24 325 aaPredicted RBP9.16□□□□□ -0.94
NPM1-211ENST00000523622 A0A0U1RQG5 324 aaPredicted RBP9.15□□□□□ -0.94
NPM1-211ENST00000523622 E9PSI1 815 aa9.15□□□□□ -0.94
NPM1-211ENST00000523622 TMCO4Q5TGY1 634 aa9.15□□□□□ -0.94
NPM1-211ENST00000523622 ARID4BQ4LE39 1312 aaPredicted RBP9.14□□□□□ -0.95
NPM1-211ENST00000523622 CENPBP07199 599 aaPredicted RBP9.14□□□□□ -0.95
NPM1-211ENST00000523622 MFAP1P55081 439 aaKnown RBP9.14□□□□□ -0.95
NPM1-211ENST00000523622 AAMPQ13685 434 aa9.14□□□□□ -0.95
NPM1-211ENST00000523622 TRAIPQ9BWF2 469 aa9.13□□□□□ -0.95
NPM1-211ENST00000523622 PPM1GO15355 546 aaPredicted RBP9.12□□□□□ -0.95
NPM1-211ENST00000523622 LMOD2Q6P5Q4 547 aa9.12□□□□□ -0.95
NPM1-211ENST00000523622 ECM2O94769 699 aaPredicted RBP9.11□□□□□ -0.95
NPM1-211ENST00000523622 AEBP1Q8IUX7 1158 aa9.11□□□□□ -0.95
NPM1-211ENST00000523622 POTEDQ86YR6 584 aa9.07□□□□□ -0.96
NPM1-211ENST00000523622 PRDM16Q9HAZ2 1276 aa9.07□□□□□ -0.96
NPM1-211ENST00000523622 ANO8Q9HCE9 1232 aaPredicted RBP9.07□□□□□ -0.96
NPM1-211ENST00000523622 NCLP19338 710 aaKnown RBP9.06□□□□□ -0.96
NPM1-211ENST00000523622 DNAJC5BQ9UF47 199 aa9.06□□□□□ -0.96
NPM1-211ENST00000523622 GZF1Q9H116 711 aaPredicted RBP9.05□□□□□ -0.96
NPM1-211ENST00000523622 RGL2O15211 777 aa9.04□□□□□ -0.96
NPM1-211ENST00000523622 CCDC27Q2M243 656 aa9.04□□□□□ -0.96
NPM1-211ENST00000523622 TEX2Q8IWB9 1127 aa9.04□□□□□ -0.96
NPM1-211ENST00000523622 PIAS4Q8N2W9 510 aaPredicted RBP9.03□□□□□ -0.96
NPM1-211ENST00000523622 CCDC82Q8N4S0 544 aa9.03□□□□□ -0.96
NPM1-211ENST00000523622 CCDC125Q86Z20 511 aa9.01□□□□□ -0.97
NPM1-211ENST00000523622 ZNF526Q8TF50 670 aaPredicted RBP9.01□□□□□ -0.97
NPM1-211ENST00000523622 SLC24A3Q9HC58 644 aa9.01□□□□□ -0.97
NPM1-211ENST00000523622 SETQ01105 290 aaPredicted RBP8.99□□□□□ -0.97
NPM1-211ENST00000523622 PLCD4Q9BRC7 762 aa8.99□□□□□ -0.97
NPM1-211ENST00000523622 CHGAP10645 457 aaKnown RBP8.98□□□□□ -0.97
NPM1-211ENST00000523622 CLSPNQ9HAW4 1339 aa8.98□□□□□ -0.97
NPM1-211ENST00000523622 KDM4AO75164 1064 aa8.96□□□□□ -0.98
NPM1-211ENST00000523622 PRDM10Q9NQV6 1147 aa8.96□□□□□ -0.98
NPM1-211ENST00000523622 ZNF316A6NFI3 1004 aaPredicted RBP8.94□□□□□ -0.98
NPM1-211ENST00000523622 ZC3H15Q8WU90 426 aaKnown RBP8.94□□□□□ -0.98
NPM1-211ENST00000523622 CADPSQ9ULU8 1353 aa8.94□□□□□ -0.98
NPM1-211ENST00000523622 MKRN3Q13064 507 aaKnown RBP8.93□□□□□ -0.98
NPM1-211ENST00000523622 RBM10P98175 930 aaKnown RBP8.92□□□□□ -0.98
NPM1-211ENST00000523622 MAFGO15525 162 aa8.91□□□□□ -0.98
NPM1-211ENST00000523622 PTMSP20962 102 aa8.91□□□□□ -0.98
NPM1-211ENST00000523622 CNPY4Q8N129 248 aa8.91□□□□□ -0.98
NPM1-211ENST00000523622 MAPK8IP2Q13387 824 aaPredicted RBP8.9□□□□□ -0.98
NPM1-211ENST00000523622 ANAPC15P60006 121 aa8.89□□□□□ -0.99
NPM1-211ENST00000523622 CHRM1P11229 460 aaPredicted RBP8.87□□□□□ -0.99
NPM1-211ENST00000523622 CANXP27824 592 aaKnown RBP8.87□□□□□ -0.99
NPM1-211ENST00000523622 GRIPAP1Q4V328 841 aa8.87□□□□□ -0.99
NPM1-211ENST00000523622 ANP32EQ9BTT0 268 aa8.87□□□□□ -0.99
NPM1-211ENST00000523622 IL27Q8NEV9 243 aa8.86□□□□□ -0.99
NPM1-211ENST00000523622 FBXW7Q969H0 707 aa8.86□□□□□ -0.99
NPM1-211ENST00000523622 WDR70Q9NW82 654 aa8.86□□□□□ -0.99
NPM1-211ENST00000523622 EXOC8Q8IYI6 725 aa8.85□□□□□ -0.99
NPM1-211ENST00000523622 LOC102724159A0A0B4J2E5 919 aa8.84□□□□□ -0.99
NPM1-211ENST00000523622 PWP2Q15269 919 aaKnown RBP8.84□□□□□ -0.99
NPM1-211ENST00000523622 MYCNP04198 464 aaPredicted RBP8.83□□□□□ -1
NPM1-211ENST00000523622 MCCP23508 829 aa8.83□□□□□ -1
NPM1-211ENST00000523622 HSP90AB4PQ58FF6 505 aa8.83□□□□□ -1
NPM1-211ENST00000523622 BARGINQ6ZT62 677 aa8.83□□□□□ -1
NPM1-211ENST00000523622 SLC4A2P04920 1241 aa8.82□□□□□ -1
NPM1-211ENST00000523622 IRF5Q13568 498 aa8.82□□□□□ -1
NPM1-211ENST00000523622 ERICH6BQ5W0A0 696 aa8.82□□□□□ -1
NPM1-211ENST00000523622 P3H3Q8IVL6 736 aa8.82□□□□□ -1
NPM1-211ENST00000523622 DNAJC2Q99543 621 aaKnown RBP8.82□□□□□ -1
NPM1-211ENST00000523622 GPATCH11Q8N954 259 aa8.81□□□□□ -1
NPM1-211ENST00000523622 SPOCK2Q92563 424 aa8.81□□□□□ -1
NPM1-211ENST00000523622 AMOTL2Q9Y2J4 779 aa8.81□□□□□ -1
NPM1-211ENST00000523622 RIPOR2Q9Y4F9 1068 aa8.81□□□□□ -1
NPM1-211ENST00000523622 SCAF1Q9H7N4 1312 aaKnown RBP8.8□□□□□ -1
NPM1-211ENST00000523622 PLEKHD1A6NEE1 506 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms