RNA–Protein interactions for RNA: ENST00000435606.1

LDLRAD4-204, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best)

Gene LDLRAD4, Length 8,032 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-204ENST00000435606 ZCCHC6Q5VYS8 1495 aaKnown RBP14.12□□□□□ -0.15
LDLRAD4-204ENST00000435606 CDCA8Q53HL2 280 aa14.11□□□□□ -0.15
LDLRAD4-204ENST00000435606 CFAP53Q96M91 514 aa14.1□□□□□ -0.15
LDLRAD4-204ENST00000435606 ARXQ96QS3 562 aa14.1□□□□□ -0.15
LDLRAD4-204ENST00000435606 DDX10Q13206 875 aaKnown RBP14.09□□□□□ -0.15
LDLRAD4-204ENST00000435606 NPHP1O15259 732 aa14.09□□□□□ -0.15
LDLRAD4-204ENST00000435606 SENP3Q9H4L4 574 aaPredicted RBP14.08□□□□□ -0.15
LDLRAD4-204ENST00000435606 TRHP20396 242 aaPredicted RBP14.08□□□□□ -0.16
LDLRAD4-204ENST00000435606 CCDC136Q96JN2 1154 aa14.05□□□□□ -0.16
LDLRAD4-204ENST00000435606 BAZ1BQ9UIG0 1483 aaKnown RBP14.05□□□□□ -0.16
LDLRAD4-204ENST00000435606 MRS2Q9HD23 443 aa14.04□□□□□ -0.16
LDLRAD4-204ENST00000435606 FKBP8Q14318 412 aa14.04□□□□□ -0.16
LDLRAD4-204ENST00000435606 EIF4G2P78344 907 aaKnown RBP eCLIP14.03□□□□□ -0.16
LDLRAD4-204ENST00000435606 HDGFP51858 240 aaKnown RBP14.03□□□□□ -0.16
LDLRAD4-204ENST00000435606 RRP7BPQ9NSQ0 103 aa14.03□□□□□ -0.16
LDLRAD4-204ENST00000435606 CFDP1Q9UEE9 299 aaPredicted RBP14.03□□□□□ -0.16
LDLRAD4-204ENST00000435606 LMOD2Q6P5Q4 547 aa14.03□□□□□ -0.16
LDLRAD4-204ENST00000435606 NACADO15069 1562 aa14.03□□□□□ -0.16
LDLRAD4-204ENST00000435606 CLIP1P30622 1438 aa14.03□□□□□ -0.16
LDLRAD4-204ENST00000435606 EIF5BO60841 1220 aaKnown RBP14.01□□□□□ -0.17
LDLRAD4-204ENST00000435606 POGKQ9P215 609 aa14.01□□□□□ -0.17
LDLRAD4-204ENST00000435606 CASC1Q6TDU7 716 aa13.99□□□□□ -0.17
LDLRAD4-204ENST00000435606 KNSTRNQ9Y448 316 aa13.99□□□□□ -0.17
LDLRAD4-204ENST00000435606 NCLP19338 710 aaKnown RBP13.99□□□□□ -0.17
LDLRAD4-204ENST00000435606 PPM1GO15355 546 aaPredicted RBP13.99□□□□□ -0.17
LDLRAD4-204ENST00000435606 RGL3Q3MIN7 710 aa13.99□□□□□ -0.17
LDLRAD4-204ENST00000435606 EEA1Q15075 1411 aa13.97□□□□□ -0.17
LDLRAD4-204ENST00000435606 KIF27Q86VH2 1401 aa13.97□□□□□ -0.17
LDLRAD4-204ENST00000435606 KANK1Q14678 1352 aa13.96□□□□□ -0.17
LDLRAD4-204ENST00000435606 NUDCQ9Y266 331 aa13.95□□□□□ -0.18
LDLRAD4-204ENST00000435606 GOLGA3Q08378 1498 aa13.95□□□□□ -0.18
LDLRAD4-204ENST00000435606 MAPK8IP3Q9UPT6 1336 aa13.95□□□□□ -0.18
LDLRAD4-204ENST00000435606 ZRSR1Q15695 479 aaKnown RBP13.94□□□□□ -0.18
LDLRAD4-204ENST00000435606 PNNQ9H307 717 aaKnown RBP13.93□□□□□ -0.18
LDLRAD4-204ENST00000435606 BECN1Q14457 450 aa13.92□□□□□ -0.18
LDLRAD4-204ENST00000435606 FTSJ3Q8IY81 847 aaKnown RBP13.91□□□□□ -0.18
LDLRAD4-204ENST00000435606 GOLGA2Q08379 1002 aa13.91□□□□□ -0.18
LDLRAD4-204ENST00000435606 DCAF1Q9Y4B6 1507 aa13.9□□□□□ -0.18
LDLRAD4-204ENST00000435606 CHMP4BQ9H444 224 aaKnown RBP13.89□□□□□ -0.19
LDLRAD4-204ENST00000435606 GOLGA6L22H0YM25 854 aa13.89□□□□□ -0.19
LDLRAD4-204ENST00000435606 CARD11Q9BXL7 1154 aa13.88□□□□□ -0.19
LDLRAD4-204ENST00000435606 LAS1LQ9Y4W2 734 aaKnown RBP13.87□□□□□ -0.19
LDLRAD4-204ENST00000435606 WRNQ14191 1432 aaPredicted RBP eCLIP13.87□□□□□ -0.19
LDLRAD4-204ENST00000435606 TULP1O00294 542 aaPredicted RBP13.85□□□□□ -0.19
LDLRAD4-204ENST00000435606 EIF4G1Q04637 1599 aaKnown RBP13.85□□□□□ -0.19
LDLRAD4-204ENST00000435606 DDRGK1Q96HY6 314 aa13.85□□□□□ -0.19
LDLRAD4-204ENST00000435606 ANP32EQ9BTT0 268 aa13.84□□□□□ -0.19
LDLRAD4-204ENST00000435606 CCNB3Q8WWL7 1395 aa13.84□□□□□ -0.19
LDLRAD4-204ENST00000435606 MLECQ14165 292 aa13.84□□□□□ -0.19
LDLRAD4-204ENST00000435606 OS9Q13438 667 aaPredicted RBP13.84□□□□□ -0.19
LDLRAD4-204ENST00000435606 MS4A1P11836 297 aa13.81□□□□□ -0.2
LDLRAD4-204ENST00000435606 CEP164Q9UPV0 1460 aa13.81□□□□□ -0.2
LDLRAD4-204ENST00000435606 FHAD1B1AJZ9 1412 aa13.79□□□□□ -0.2
LDLRAD4-204ENST00000435606 FGD1P98174 961 aa13.78□□□□□ -0.2
LDLRAD4-204ENST00000435606 GLIPR1L2Q4G1C9 344 aa13.78□□□□□ -0.2
LDLRAD4-204ENST00000435606 HIRIP3Q9BW71 556 aaPredicted RBP13.78□□□□□ -0.2
LDLRAD4-204ENST00000435606 TMX4Q9H1E5 349 aaPredicted RBP13.77□□□□□ -0.2
LDLRAD4-204ENST00000435606 CEP162Q5TB80 1403 aa13.77□□□□□ -0.21
LDLRAD4-204ENST00000435606 U2SURPO15042 1029 aaKnown RBP13.76□□□□□ -0.21
LDLRAD4-204ENST00000435606 SRPK2P78362 688 aaKnown RBP13.76□□□□□ -0.21
LDLRAD4-204ENST00000435606 CARMIL2Q6F5E8 1435 aa13.76□□□□□ -0.21
LDLRAD4-204ENST00000435606 NEUROD2Q15784 382 aa13.76□□□□□ -0.21
LDLRAD4-204ENST00000435606 BAZ1AQ9NRL2 1556 aaPredicted RBP13.75□□□□□ -0.21
LDLRAD4-204ENST00000435606 TMF1P82094 1093 aa13.75□□□□□ -0.21
LDLRAD4-204ENST00000435606 KCNJ4P48050 445 aa13.74□□□□□ -0.21
LDLRAD4-204ENST00000435606 TRIM44Q96DX7 344 aaPredicted RBP13.74□□□□□ -0.21
LDLRAD4-204ENST00000435606 TNNT2P45379 298 aaPredicted RBP13.74□□□□□ -0.21
LDLRAD4-204ENST00000435606 RTF1Q92541 710 aaKnown RBP13.73□□□□□ -0.21
LDLRAD4-204ENST00000435606 NBR1Q14596 966 aa13.73□□□□□ -0.21
LDLRAD4-204ENST00000435606 GOLGA6L6A8MZA4 724 aa13.71□□□□□ -0.22
LDLRAD4-204ENST00000435606 HDGFL2Q7Z4V5 671 aaPredicted RBP13.7□□□□□ -0.22
LDLRAD4-204ENST00000435606 PDS5BQ9NTI5 1447 aa13.7□□□□□ -0.22
LDLRAD4-204ENST00000435606 NAP1L2Q9ULW6 460 aaPredicted RBP13.7□□□□□ -0.22
LDLRAD4-204ENST00000435606 PTMAP06454 111 aaKnown RBP13.69□□□□□ -0.22
LDLRAD4-204ENST00000435606 SOX12O15370 315 aa13.69□□□□□ -0.22
LDLRAD4-204ENST00000435606 IRX6P78412 446 aaPredicted RBP13.69□□□□□ -0.22
LDLRAD4-204ENST00000435606 GGT6Q6P531 493 aa13.69□□□□□ -0.22
LDLRAD4-204ENST00000435606 CSB-PGBD3P0DP91 1061 aa13.68□□□□□ -0.22
LDLRAD4-204ENST00000435606 PAK3O75914 559 aaPredicted RBP13.68□□□□□ -0.22
LDLRAD4-204ENST00000435606 TAOK2Q9UL54 1235 aa13.68□□□□□ -0.22
LDLRAD4-204ENST00000435606 ISY1Q9ULR0 285 aaKnown RBP13.67□□□□□ -0.22
LDLRAD4-204ENST00000435606 FRAT1Q92837 279 aaPredicted RBP13.67□□□□□ -0.22
LDLRAD4-204ENST00000435606 CC2D1BQ5T0F9 858 aaKnown RBP13.67□□□□□ -0.22
LDLRAD4-204ENST00000435606 DCAF11Q8TEB1 546 aa13.67□□□□□ -0.22
LDLRAD4-204ENST00000435606 CUX2O14529 1486 aa13.67□□□□□ -0.22
LDLRAD4-204ENST00000435606 CHMP4AQ9BY43 222 aa13.66□□□□□ -0.22
LDLRAD4-204ENST00000435606 CCDC9Q9Y3X0 531 aaKnown RBP13.66□□□□□ -0.22
LDLRAD4-204ENST00000435606 CARMIL1Q5VZK9 1371 aa13.66□□□□□ -0.22
LDLRAD4-204ENST00000435606 CLSTN1O94985 981 aa13.66□□□□□ -0.22
LDLRAD4-204ENST00000435606 MORC1Q86VD1 984 aa13.66□□□□□ -0.22
LDLRAD4-204ENST00000435606 EID1Q9Y6B2 187 aa13.66□□□□□ -0.22
LDLRAD4-204ENST00000435606 TNIKQ9UKE5 1360 aa13.65□□□□□ -0.22
LDLRAD4-204ENST00000435606 CFAP44Q96MT7 982 aa13.65□□□□□ -0.22
LDLRAD4-204ENST00000435606 MCCP23508 829 aa13.64□□□□□ -0.23
LDLRAD4-204ENST00000435606 NRDCO43847 1150 aa13.64□□□□□ -0.23
LDLRAD4-204ENST00000435606 TPRNQ4KMQ1 711 aa13.63□□□□□ -0.23
LDLRAD4-204ENST00000435606 CALD1Q05682 793 aaKnown RBP13.63□□□□□ -0.23
LDLRAD4-204ENST00000435606 STK26Q9P289 416 aa13.63□□□□□ -0.23
LDLRAD4-204ENST00000435606 SAFB2Q14151 953 aaKnown RBP eCLIP13.62□□□□□ -0.23
LDLRAD4-204ENST00000435606 SMARCA2P51531 1590 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms