RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 SPATA45Q537H7 98 aa9.03□□□□□ -0.96
SCAF1-202ENST00000595242 SUMO4Q6EEV6 95 aa9.03□□□□□ -0.96
SCAF1-202ENST00000595242 STHQ8IWL8 128 aa9.03□□□□□ -0.96
SCAF1-202ENST00000595242 MIEN1Q9BRT3 115 aa9.03□□□□□ -0.96
SCAF1-202ENST00000595242 JPT2Q9H910 190 aa9.03□□□□□ -0.96
SCAF1-202ENST00000595242 ORMDL2Q53FV1 153 aa9.02□□□□□ -0.97
SCAF1-202ENST00000595242 MRPL52Q86TS9 123 aaKnown RBP9.02□□□□□ -0.97
SCAF1-202ENST00000595242 C11orf72Q8NBR9 251 aa9.02□□□□□ -0.97
SCAF1-202ENST00000595242 IFI27L1Q96BM0 104 aa9.02□□□□□ -0.97
SCAF1-202ENST00000595242 RPL39LQ96EH5 51 aaKnown RBP9.02□□□□□ -0.97
SCAF1-202ENST00000595242 C14orf144Q96I85 54 aa9.02□□□□□ -0.97
SCAF1-202ENST00000595242 SPXQ9BT56 116 aa9.02□□□□□ -0.97
SCAF1-202ENST00000595242 X6R8D5 127 aa9.02□□□□□ -0.97
SCAF1-202ENST00000595242 GIG44P09565 113 aaPredicted RBP9.01□□□□□ -0.97
SCAF1-202ENST00000595242 IGLC3P0DOY3 106 aa9.01□□□□□ -0.97
SCAF1-202ENST00000595242 POLR2KP53803 58 aaKnown RBP9.01□□□□□ -0.97
SCAF1-202ENST00000595242 NUTF2P61970 127 aaKnown RBP9.01□□□□□ -0.97
SCAF1-202ENST00000595242 CTAG1AP78358 180 aa9.01□□□□□ -0.97
SCAF1-202ENST00000595242 ZNF876PQ49A33 203 aa9.01□□□□□ -0.97
SCAF1-202ENST00000595242 C1orf158Q8N1D5 194 aa9.01□□□□□ -0.97
SCAF1-202ENST00000595242 LINC01549A6NIU2 74 aa9□□□□□ -0.97
SCAF1-202ENST00000595242 M0R2P5 195 aa9□□□□□ -0.97
SCAF1-202ENST00000595242 ATP5LO75964 103 aa9□□□□□ -0.97
SCAF1-202ENST00000595242 UFSP1Q6NVU6 142 aa9□□□□□ -0.97
SCAF1-202ENST00000595242 ZNF705AQ6ZN79 300 aaPredicted RBP9□□□□□ -0.97
SCAF1-202ENST00000595242 ST20Q9HBF5 79 aa9□□□□□ -0.97
SCAF1-202ENST00000595242 VPS13BQ7Z7G8 4022 aa9□□□□□ -0.97
SCAF1-202ENST00000595242 A0A087WWL8 130 aa8.99□□□□□ -0.97
SCAF1-202ENST00000595242 A8MWV9 139 aa8.99□□□□□ -0.97
SCAF1-202ENST00000595242 M0QY20 66 aa8.99□□□□□ -0.97
SCAF1-202ENST00000595242 MORN3Q6PF18 240 aaPredicted RBP8.99□□□□□ -0.97
SCAF1-202ENST00000595242 ATOH7Q8N100 152 aa8.99□□□□□ -0.97
SCAF1-202ENST00000595242 UQCR10Q9UDW1 63 aa8.99□□□□□ -0.97
SCAF1-202ENST00000595242 TRBV27A0A0K0K1C4 114 aa8.98□□□□□ -0.97
SCAF1-202ENST00000595242 TCAPO15273 167 aa8.98□□□□□ -0.97
SCAF1-202ENST00000595242 MAJINQ3KP22 176 aa8.98□□□□□ -0.97
SCAF1-202ENST00000595242 TOMM6Q96B49 74 aa8.98□□□□□ -0.97
SCAF1-202ENST00000595242 LINC01587Q99440 93 aa8.98□□□□□ -0.97
SCAF1-202ENST00000595242 FAT1Q14517 4588 aa8.98□□□□□ -0.97
SCAF1-202ENST00000595242 RHODO00212 210 aa8.97□□□□□ -0.97
SCAF1-202ENST00000595242 G0S2P27469 103 aa8.97□□□□□ -0.97
SCAF1-202ENST00000595242 ZNF56Q15929 161 aa8.97□□□□□ -0.97
SCAF1-202ENST00000595242 LBHQ53QV2 105 aaPredicted RBP8.97□□□□□ -0.97
SCAF1-202ENST00000595242 C6orf223Q8N319 242 aa8.97□□□□□ -0.97
SCAF1-202ENST00000595242 C1QTNF4Q9BXJ3 329 aa8.97□□□□□ -0.97
SCAF1-202ENST00000595242 XCL2Q9UBD3 114 aa8.97□□□□□ -0.97
SCAF1-202ENST00000595242 F5H697 171 aa8.96□□□□□ -0.98
SCAF1-202ENST00000595242 H7C1H1 209 aa8.96□□□□□ -0.98
SCAF1-202ENST00000595242 VCYO14598 125 aa8.96□□□□□ -0.98
SCAF1-202ENST00000595242 RS1O15537 224 aa8.96□□□□□ -0.98
SCAF1-202ENST00000595242 ODF1Q14990 250 aa8.96□□□□□ -0.98
SCAF1-202ENST00000595242 FAM74A4Q5TZK3 123 aa8.96□□□□□ -0.98
SCAF1-202ENST00000595242 RNASE8Q8TDE3 154 aaKnown RBP8.96□□□□□ -0.98
SCAF1-202ENST00000595242 TMEM263Q8WUH6 116 aaKnown RBP8.96□□□□□ -0.98
SCAF1-202ENST00000595242 C18orf15Q96N68 181 aa8.96□□□□□ -0.98
SCAF1-202ENST00000595242 GOLT1BQ9Y3E0 138 aa8.96□□□□□ -0.98
SCAF1-202ENST00000595242 TRAV12-1A0A0B4J245 112 aa8.95□□□□□ -0.98
SCAF1-202ENST00000595242 hDV102S1A0JD36 115 aa8.95□□□□□ -0.98
SCAF1-202ENST00000595242 SDHAF1A6NFY7 115 aa8.95□□□□□ -0.98
SCAF1-202ENST00000595242 HSBP1L1C9JCN9 74 aa8.95□□□□□ -0.98
SCAF1-202ENST00000595242 NUDT3O95989 172 aa8.95□□□□□ -0.98
SCAF1-202ENST00000595242 ZFP2Q6ZN57 461 aa8.95□□□□□ -0.98
SCAF1-202ENST00000595242 CSNK1G2-AS1Q8NCQ2 148 aa8.95□□□□□ -0.98
SCAF1-202ENST00000595242 H0Y8G0 127 aa8.94□□□□□ -0.98
SCAF1-202ENST00000595242 RHOHQ15669 191 aa8.94□□□□□ -0.98
SCAF1-202ENST00000595242 CFAP126Q5VTH2 177 aa8.94□□□□□ -0.98
SCAF1-202ENST00000595242 C2orf66Q6UXQ4 117 aa8.94□□□□□ -0.98
SCAF1-202ENST00000595242 KIR2DL4Q99706 377 aa8.94□□□□□ -0.98
SCAF1-202ENST00000595242 PMCHL2Q9BQD1 86 aa8.94□□□□□ -0.98
SCAF1-202ENST00000595242 NBDYA0A0U1RRE5 68 aa8.93□□□□□ -0.98
SCAF1-202ENST00000595242 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.93□□□□□ -0.98
SCAF1-202ENST00000595242 HTN1P15515 57 aa8.93□□□□□ -0.98
SCAF1-202ENST00000595242 AZU1P20160 251 aa8.93□□□□□ -0.98
SCAF1-202ENST00000595242 KRTAP10-2P60368 255 aa8.93□□□□□ -0.98
SCAF1-202ENST00000595242 Q5VSD8 79 aa8.93□□□□□ -0.98
SCAF1-202ENST00000595242 ERASQ7Z444 233 aa8.93□□□□□ -0.98
SCAF1-202ENST00000595242 TMEM208Q9BTX3 173 aa8.93□□□□□ -0.98
SCAF1-202ENST00000595242 CYSLTR1Q9Y271 337 aa8.93□□□□□ -0.98
SCAF1-202ENST00000595242 MRPS16Q9Y3D3 137 aaKnown RBP8.93□□□□□ -0.98
SCAF1-202ENST00000595242 A0A087WX48 190 aa8.92□□□□□ -0.98
SCAF1-202ENST00000595242 IGHV3-53P01767 116 aa8.92□□□□□ -0.98
SCAF1-202ENST00000595242 PRM2P04554 102 aa8.92□□□□□ -0.98
SCAF1-202ENST00000595242 SPART-AS1P0CW21 52 aa8.92□□□□□ -0.98
SCAF1-202ENST00000595242 DAZ2Q13117 558 aaKnown RBP8.92□□□□□ -0.98
SCAF1-202ENST00000595242 C16orf74Q96GX8 76 aa8.92□□□□□ -0.98
SCAF1-202ENST00000595242 DNAJC30Q96LL9 226 aa8.92□□□□□ -0.98
SCAF1-202ENST00000595242 C2orf88Q9BSF0 95 aa8.92□□□□□ -0.98
SCAF1-202ENST00000595242 PLAC8L1A1L4L8 177 aa8.91□□□□□ -0.98
SCAF1-202ENST00000595242 M0R143 59 aa8.91□□□□□ -0.98
SCAF1-202ENST00000595242 EREGO14944 169 aa8.91□□□□□ -0.98
SCAF1-202ENST00000595242 PRSS1P07477 247 aa8.91□□□□□ -0.98
SCAF1-202ENST00000595242 HNRNPA3P51991 378 aaKnown RBP8.91□□□□□ -0.98
SCAF1-202ENST00000595242 Q6ZN92 141 aa8.91□□□□□ -0.98
SCAF1-202ENST00000595242 NEXN-AS1Q8NBZ9 246 aa8.91□□□□□ -0.98
SCAF1-202ENST00000595242 SCGB3A1Q96QR1 104 aa8.91□□□□□ -0.98
SCAF1-202ENST00000595242 TIMM17AQ99595 171 aa8.91□□□□□ -0.98
SCAF1-202ENST00000595242 SNHG12Q9BXW3 62 aa8.91□□□□□ -0.98
SCAF1-202ENST00000595242 MRPL16Q9NX20 251 aaKnown RBP8.91□□□□□ -0.98
SCAF1-202ENST00000595242 DKK2Q9UBU2 259 aa8.91□□□□□ -0.98
SCAF1-202ENST00000595242 IGIPA6NJ69 53 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms