RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 FAM19A2Q8N3H0 131 aa7.89□□□□□ -1.15
VMP1-207ENST00000588131 AP5S1Q9NUS5 200 aa7.89□□□□□ -1.15
VMP1-207ENST00000588131 MEGF8Q7Z7M0 2845 aa7.88□□□□□ -1.15
VMP1-207ENST00000588131 A0A096LNJ9 63 aa7.88□□□□□ -1.15
VMP1-207ENST00000588131 IGHV1-24A0A0C4DH33 117 aa7.88□□□□□ -1.15
VMP1-207ENST00000588131 IFITM10A6NMD0 228 aa7.88□□□□□ -1.15
VMP1-207ENST00000588131 LAGE3Q14657 143 aa7.88□□□□□ -1.15
VMP1-207ENST00000588131 TRAV10A0A0B4J240 114 aa7.87□□□□□ -1.15
VMP1-207ENST00000588131 KIR2DL4Q99706 377 aa7.87□□□□□ -1.15
VMP1-207ENST00000588131 A0A096LPF7 62 aa7.86□□□□□ -1.15
VMP1-207ENST00000588131 FCER1GP30273 86 aa7.86□□□□□ -1.15
VMP1-207ENST00000588131 AMTP48728 403 aa7.86□□□□□ -1.15
VMP1-207ENST00000588131 NTM-AS1Q6ZSK4 140 aa7.86□□□□□ -1.15
VMP1-207ENST00000588131 DAZ4Q86SG3 579 aaKnown RBP7.86□□□□□ -1.15
VMP1-207ENST00000588131 DAZ3Q9NR90 486 aaKnown RBP7.86□□□□□ -1.15
VMP1-207ENST00000588131 K7EMI3 77 aa7.85□□□□□ -1.15
VMP1-207ENST00000588131 NUDT3O95989 172 aa7.85□□□□□ -1.15
VMP1-207ENST00000588131 COTL1Q14019 142 aa7.85□□□□□ -1.15
VMP1-207ENST00000588131 ORMDL2Q53FV1 153 aa7.85□□□□□ -1.15
VMP1-207ENST00000588131 ATP6V0E2Q8NHE4 81 aa7.85□□□□□ -1.15
VMP1-207ENST00000588131 HIST1H2BLQ99880 126 aa7.85□□□□□ -1.15
VMP1-207ENST00000588131 CHCHD7Q9BUK0 85 aa7.85□□□□□ -1.15
VMP1-207ENST00000588131 ICOSQ9Y6W8 199 aa7.85□□□□□ -1.15
VMP1-207ENST00000588131 TGP01266 2768 aa7.85□□□□□ -1.15
VMP1-207ENST00000588131 H3BNG1 76 aa7.84□□□□□ -1.15
VMP1-207ENST00000588131 HBDP02042 147 aa7.84□□□□□ -1.15
VMP1-207ENST00000588131 FABP4P15090 132 aa7.84□□□□□ -1.15
VMP1-207ENST00000588131 BTF3P20290 206 aaKnown RBP7.84□□□□□ -1.15
VMP1-207ENST00000588131 LORP23490 312 aaPredicted RBP7.84□□□□□ -1.15
VMP1-207ENST00000588131 S100A2P29034 98 aa7.84□□□□□ -1.15
VMP1-207ENST00000588131 MRPL23Q16540 153 aaKnown RBP7.84□□□□□ -1.15
VMP1-207ENST00000588131 LINC00173Q6ZV60 143 aa7.84□□□□□ -1.15
VMP1-207ENST00000588131 LOC105371267A0A1B0GV96 52 aa7.83□□□□□ -1.16
VMP1-207ENST00000588131 RPL39P62891 51 aaKnown RBP7.83□□□□□ -1.16
VMP1-207ENST00000588131 C2orf66Q6UXQ4 117 aa7.83□□□□□ -1.16
VMP1-207ENST00000588131 TMEM18Q96B42 140 aa7.83□□□□□ -1.16
VMP1-207ENST00000588131 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.82□□□□□ -1.16
VMP1-207ENST00000588131 IGKV2-29A2NJV5 120 aaPredicted RBP7.82□□□□□ -1.16
VMP1-207ENST00000588131 C20orf203Q8NBC4 194 aa7.82□□□□□ -1.16
VMP1-207ENST00000588131 TOMM6Q96B49 74 aa7.82□□□□□ -1.16
VMP1-207ENST00000588131 GTSF1LQ9H1H1 148 aa7.82□□□□□ -1.16
VMP1-207ENST00000588131 DYNC2H1Q8NCM8 4307 aaKnown RBP7.82□□□□□ -1.16
VMP1-207ENST00000588131 COL7A1Q02388 2944 aa7.81□□□□□ -1.16
VMP1-207ENST00000588131 TRBV6-8A0A0A6YYG3 113 aa7.81□□□□□ -1.16
VMP1-207ENST00000588131 LEPROTL1O95214 131 aa7.81□□□□□ -1.16
VMP1-207ENST00000588131 PACRGQ96M98 296 aaPredicted RBP7.81□□□□□ -1.16
VMP1-207ENST00000588131 CYSLTR1Q9Y271 337 aa7.81□□□□□ -1.16
VMP1-207ENST00000588131 TRBV25-1A0A075B6N4 114 aa7.8□□□□□ -1.16
VMP1-207ENST00000588131 IGLL5B9A064 214 aa7.8□□□□□ -1.16
VMP1-207ENST00000588131 TMEM97Q5BJF2 176 aa7.8□□□□□ -1.16
VMP1-207ENST00000588131 SH2D6Q7Z4S9 175 aa7.8□□□□□ -1.16
VMP1-207ENST00000588131 OR10D4PQ8NGN7 298 aa7.8□□□□□ -1.16
VMP1-207ENST00000588131 TMEM243Q9BU79 118 aa7.8□□□□□ -1.16
VMP1-207ENST00000588131 CEMP1Q6PRD7 247 aaPredicted RBP7.79□□□□□ -1.16
VMP1-207ENST00000588131 LYPD5Q6UWN5 251 aa7.79□□□□□ -1.16
VMP1-207ENST00000588131 C15orf53Q8NAA6 179 aa7.79□□□□□ -1.16
VMP1-207ENST00000588131 SCGB3A1Q96QR1 104 aa7.79□□□□□ -1.16
VMP1-207ENST00000588131 IGIPA6NJ69 53 aa7.78□□□□□ -1.16
VMP1-207ENST00000588131 G0S2P27469 103 aa7.78□□□□□ -1.16
VMP1-207ENST00000588131 GAGE6Q13070 117 aa7.78□□□□□ -1.16
VMP1-207ENST00000588131 ESRGQ1W209 222 aa7.78□□□□□ -1.16
VMP1-207ENST00000588131 OPRPNQ99935 248 aaPredicted RBP7.78□□□□□ -1.16
VMP1-207ENST00000588131 HSPB8Q9UJY1 196 aa7.78□□□□□ -1.16
VMP1-207ENST00000588131 UBE2D4Q9Y2X8 147 aa7.78□□□□□ -1.16
VMP1-207ENST00000588131 C3orf79P0CE67 100 aa7.77□□□□□ -1.17
VMP1-207ENST00000588131 FGF6P10767 208 aa7.77□□□□□ -1.17
VMP1-207ENST00000588131 TIRAPP58753 221 aa7.77□□□□□ -1.17
VMP1-207ENST00000588131 KRTDAPP60985 99 aa7.77□□□□□ -1.17
VMP1-207ENST00000588131 LELP1Q5T871 98 aa7.77□□□□□ -1.17
VMP1-207ENST00000588131 ERASQ7Z444 233 aa7.77□□□□□ -1.17
VMP1-207ENST00000588131 SPATA12Q7Z6I5 190 aa7.77□□□□□ -1.17
VMP1-207ENST00000588131 FAM104AQ969W3 186 aa7.77□□□□□ -1.17
VMP1-207ENST00000588131 IFI27L1Q96BM0 104 aa7.77□□□□□ -1.17
VMP1-207ENST00000588131 CHCHD5Q9BSY4 110 aa7.77□□□□□ -1.17
VMP1-207ENST00000588131 DNAH7Q8WXX0 4024 aa7.76□□□□□ -1.17
VMP1-207ENST00000588131 NUPR2A6NF83 97 aa7.76□□□□□ -1.17
VMP1-207ENST00000588131 UBE2L6O14933 153 aa7.76□□□□□ -1.17
VMP1-207ENST00000588131 ATP5LO75964 103 aa7.76□□□□□ -1.17
VMP1-207ENST00000588131 AKR1D1P51857 326 aa7.76□□□□□ -1.17
VMP1-207ENST00000588131 ZC2HC1BQ5TFG8 222 aa7.76□□□□□ -1.17
VMP1-207ENST00000588131 TIMM17AQ99595 171 aa7.76□□□□□ -1.17
VMP1-207ENST00000588131 SPANXA1Q9NS26 97 aa7.76□□□□□ -1.17
VMP1-207ENST00000588131 APLNQ9ULZ1 77 aa7.76□□□□□ -1.17
VMP1-207ENST00000588131 PYGO1Q9Y3Y4 419 aa7.76□□□□□ -1.17
VMP1-207ENST00000588131 IGLV4-3A0A075B6K6 122 aa7.75□□□□□ -1.17
VMP1-207ENST00000588131 LINC01549A6NIU2 74 aa7.75□□□□□ -1.17
VMP1-207ENST00000588131 H0Y8G0 127 aa7.75□□□□□ -1.17
VMP1-207ENST00000588131 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.75□□□□□ -1.17
VMP1-207ENST00000588131 SYS1-DBNDD2H3BUS1 97 aa7.75□□□□□ -1.17
VMP1-207ENST00000588131 H7C423 109 aa7.75□□□□□ -1.17
VMP1-207ENST00000588131 ZFAND6Q6FIF0 208 aa7.75□□□□□ -1.17
VMP1-207ENST00000588131 Q6ZUT4 128 aa7.75□□□□□ -1.17
VMP1-207ENST00000588131 MRPL52Q86TS9 123 aaKnown RBP7.75□□□□□ -1.17
VMP1-207ENST00000588131 BAALCQ8WXS3 180 aa7.75□□□□□ -1.17
VMP1-207ENST00000588131 TMEM141Q96I45 108 aa7.75□□□□□ -1.17
VMP1-207ENST00000588131 TIMM21Q9BVV7 248 aa7.75□□□□□ -1.17
VMP1-207ENST00000588131 MAP1LC3CQ9BXW4 147 aa7.75□□□□□ -1.17
VMP1-207ENST00000588131 STAB2Q8WWQ8 2551 aa7.74□□□□□ -1.17
VMP1-207ENST00000588131 MPV17L2Q567V2 206 aa7.74□□□□□ -1.17
VMP1-207ENST00000588131 RNASE13Q5GAN3 156 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms