RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 LINC01546A6NGU7 62 aa14.29□□□□□ -0.12
PSEN1-225ENST00000560005 M0QY20 66 aa14.29□□□□□ -0.12
PSEN1-225ENST00000560005 NUPR1O60356 82 aa14.29□□□□□ -0.12
PSEN1-225ENST00000560005 GATA1P15976 413 aaPredicted RBP14.29□□□□□ -0.12
PSEN1-225ENST00000560005 AMTP48728 403 aa14.29□□□□□ -0.12
PSEN1-225ENST00000560005 Q6ZTI0 123 aa14.29□□□□□ -0.12
PSEN1-225ENST00000560005 NIT2Q9NQR4 276 aa14.29□□□□□ -0.12
PSEN1-225ENST00000560005 TRGV2A0A075B6R0 118 aa14.28□□□□□ -0.12
PSEN1-225ENST00000560005 NBDYA0A0U1RRE5 68 aa14.28□□□□□ -0.12
PSEN1-225ENST00000560005 IGHV3-53P01767 116 aa14.28□□□□□ -0.12
PSEN1-225ENST00000560005 SPATA12Q7Z6I5 190 aa14.28□□□□□ -0.12
PSEN1-225ENST00000560005 DNAJC30Q96LL9 226 aa14.28□□□□□ -0.12
PSEN1-225ENST00000560005 C18orf15Q96N68 181 aa14.28□□□□□ -0.12
PSEN1-225ENST00000560005 FAT1Q14517 4588 aa14.27□□□□□ -0.12
PSEN1-225ENST00000560005 VCYO14598 125 aa14.27□□□□□ -0.13
PSEN1-225ENST00000560005 TCAPO15273 167 aa14.27□□□□□ -0.13
PSEN1-225ENST00000560005 G0S2P27469 103 aa14.27□□□□□ -0.13
PSEN1-225ENST00000560005 SMIM2Q9BVW6 85 aa14.27□□□□□ -0.13
PSEN1-225ENST00000560005 IFITM10A6NMD0 228 aa14.26□□□□□ -0.13
PSEN1-225ENST00000560005 GAS8-AS1O95177 125 aa14.26□□□□□ -0.13
PSEN1-225ENST00000560005 LINC00612Q8N6U2 182 aa14.26□□□□□ -0.13
PSEN1-225ENST00000560005 URB1-AS1Q96HZ7 61 aa14.26□□□□□ -0.13
PSEN1-225ENST00000560005 GAGE12BA1L429 117 aa14.25□□□□□ -0.13
PSEN1-225ENST00000560005 GAGE7O76087 117 aa14.25□□□□□ -0.13
PSEN1-225ENST00000560005 GAGE12FP0CL80 117 aa14.25□□□□□ -0.13
PSEN1-225ENST00000560005 GAGE12GP0CL81 117 aa14.25□□□□□ -0.13
PSEN1-225ENST00000560005 GAGE12IP0CL82 117 aa14.25□□□□□ -0.13
PSEN1-225ENST00000560005 C15orf53Q8NAA6 179 aa14.25□□□□□ -0.13
PSEN1-225ENST00000560005 OR10D4PQ8NGN7 298 aa14.25□□□□□ -0.13
PSEN1-225ENST00000560005 ZNRF2Q8NHG8 242 aa14.25□□□□□ -0.13
PSEN1-225ENST00000560005 RPL39LQ96EH5 51 aaKnown RBP14.25□□□□□ -0.13
PSEN1-225ENST00000560005 ORMDL2Q53FV1 153 aa14.24□□□□□ -0.13
PSEN1-225ENST00000560005 KIR2DL4Q99706 377 aa14.24□□□□□ -0.13
PSEN1-225ENST00000560005 TNFRSF18Q9Y5U5 241 aa14.24□□□□□ -0.13
PSEN1-225ENST00000560005 TRBV10-1A0A0K0K1A3 114 aa14.23□□□□□ -0.13
PSEN1-225ENST00000560005 LINC01549A6NIU2 74 aa14.23□□□□□ -0.13
PSEN1-225ENST00000560005 POLR2KP53803 58 aaKnown RBP14.23□□□□□ -0.13
PSEN1-225ENST00000560005 DAD1P61803 113 aa14.23□□□□□ -0.13
PSEN1-225ENST00000560005 LAGE3Q14657 143 aa14.23□□□□□ -0.13
PSEN1-225ENST00000560005 IGHV3-73A0A0B4J1V6 119 aa14.22□□□□□ -0.13
PSEN1-225ENST00000560005 FAM19A2Q8N3H0 131 aa14.22□□□□□ -0.13
PSEN1-225ENST00000560005 TMEM70Q9BUB7 260 aa14.22□□□□□ -0.13
PSEN1-225ENST00000560005 HSPB8Q9UJY1 196 aa14.22□□□□□ -0.13
PSEN1-225ENST00000560005 MYCBP2O75592 4640 aa14.22□□□□□ -0.13
PSEN1-225ENST00000560005 IGHV1-24A0A0C4DH33 117 aa14.21□□□□□ -0.13
PSEN1-225ENST00000560005 TRBV27A0A0K0K1C4 114 aa14.21□□□□□ -0.13
PSEN1-225ENST00000560005 SDHAF1A6NFY7 115 aa14.21□□□□□ -0.13
PSEN1-225ENST00000560005 EPM2AB3EWF7 344 aa14.21□□□□□ -0.13
PSEN1-225ENST00000560005 LEPROTL1O95214 131 aa14.21□□□□□ -0.13
PSEN1-225ENST00000560005 HBDP02042 147 aa14.21□□□□□ -0.13
PSEN1-225ENST00000560005 FCER1GP30273 86 aa14.21□□□□□ -0.13
PSEN1-225ENST00000560005 ZNF479Q96JC4 524 aa14.21□□□□□ -0.13
PSEN1-225ENST00000560005 TRGV4A0A0C4DH28 118 aa14.2□□□□□ -0.14
PSEN1-225ENST00000560005 TRBV6-4A0A1B0GX49 114 aa14.19□□□□□ -0.14
PSEN1-225ENST00000560005 I3L3M4 83 aa14.19□□□□□ -0.14
PSEN1-225ENST00000560005 KRTAP10-2P60368 255 aa14.19□□□□□ -0.14
PSEN1-225ENST00000560005 K7EQD1 137 aa14.18□□□□□ -0.14
PSEN1-225ENST00000560005 DEFB130BP0DP73 79 aa14.18□□□□□ -0.14
PSEN1-225ENST00000560005 DEFB130AP0DP74 79 aa14.18□□□□□ -0.14
PSEN1-225ENST00000560005 RPL36AP83881 106 aaKnown RBP14.18□□□□□ -0.14
PSEN1-225ENST00000560005 RPL36ALQ969Q0 106 aaKnown RBP14.18□□□□□ -0.14
PSEN1-225ENST00000560005 PRADC1Q9BSG0 188 aa14.18□□□□□ -0.14
PSEN1-225ENST00000560005 NUDT3O95989 172 aa14.17□□□□□ -0.14
PSEN1-225ENST00000560005 SMIM6P0DI80 62 aa14.17□□□□□ -0.14
PSEN1-225ENST00000560005 INAFM2P0DMQ5 153 aa14.17□□□□□ -0.14
PSEN1-225ENST00000560005 RHOHQ15669 191 aa14.16□□□□□ -0.14
PSEN1-225ENST00000560005 Q6ZSN1 163 aa14.16□□□□□ -0.14
PSEN1-225ENST00000560005 LINC00588Q9Y4M8 146 aa14.16□□□□□ -0.14
PSEN1-225ENST00000560005 TRBV7-3A0A075B6L6 115 aa14.15□□□□□ -0.14
PSEN1-225ENST00000560005 CCL18P55774 89 aa14.15□□□□□ -0.14
PSEN1-225ENST00000560005 NEXN-AS1Q8NBZ9 246 aa14.15□□□□□ -0.14
PSEN1-225ENST00000560005 MAP1LC3CQ9BXW4 147 aa14.15□□□□□ -0.14
PSEN1-225ENST00000560005 FHL2Q14192 279 aa14.14□□□□□ -0.15
PSEN1-225ENST00000560005 JOSD1Q15040 202 aaPredicted RBP14.14□□□□□ -0.15
PSEN1-225ENST00000560005 PMCHL1Q16048 86 aa14.14□□□□□ -0.15
PSEN1-225ENST00000560005 ATP5LO75964 103 aa14.13□□□□□ -0.15
PSEN1-225ENST00000560005 BTF3P20290 206 aaKnown RBP14.13□□□□□ -0.15
PSEN1-225ENST00000560005 DAZ4Q86SG3 579 aaKnown RBP14.13□□□□□ -0.15
PSEN1-225ENST00000560005 SLC25A29Q8N8R3 303 aa14.13□□□□□ -0.15
PSEN1-225ENST00000560005 DAZ3Q9NR90 486 aaKnown RBP14.13□□□□□ -0.15
PSEN1-225ENST00000560005 F5H768 121 aa14.12□□□□□ -0.15
PSEN1-225ENST00000560005 ATP5G1P05496 136 aa14.12□□□□□ -0.15
PSEN1-225ENST00000560005 KRTDAPP60985 99 aa14.12□□□□□ -0.15
PSEN1-225ENST00000560005 KRTAP1-5Q9BYS1 174 aa14.12□□□□□ -0.15
PSEN1-225ENST00000560005 HHLA3Q9XRX5 114 aa14.12□□□□□ -0.15
PSEN1-225ENST00000560005 VPS13BQ7Z7G8 4022 aa14.12□□□□□ -0.15
PSEN1-225ENST00000560005 PRO0255Q9UI72 69 aa14.11□□□□□ -0.15
PSEN1-225ENST00000560005 CYSLTR1Q9Y271 337 aa14.11□□□□□ -0.15
PSEN1-225ENST00000560005 A0A096LNJ9 63 aa14.1□□□□□ -0.15
PSEN1-225ENST00000560005 C20orf202A1L168 122 aa14.1□□□□□ -0.15
PSEN1-225ENST00000560005 SCGB1D1O95968 90 aa14.1□□□□□ -0.15
PSEN1-225ENST00000560005 C3orf79P0CE67 100 aa14.1□□□□□ -0.15
PSEN1-225ENST00000560005 PET117Q6UWS5 81 aa14.1□□□□□ -0.15
PSEN1-225ENST00000560005 TOMM6Q96B49 74 aa14.1□□□□□ -0.15
PSEN1-225ENST00000560005 Q9H8V8 135 aa14.1□□□□□ -0.15
PSEN1-225ENST00000560005 SRRM2Q9UQ35 2752 aaKnown RBP14.09□□□□□ -0.15
PSEN1-225ENST00000560005 COTL1Q14019 142 aa14.09□□□□□ -0.15
PSEN1-225ENST00000560005 TMEM97Q5BJF2 176 aa14.09□□□□□ -0.15
PSEN1-225ENST00000560005 IFI27L1Q96BM0 104 aa14.09□□□□□ -0.15
PSEN1-225ENST00000560005 FLG2Q5D862 2391 aaPredicted RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms