RNA–Protein interactions for RNA: ENST00000557580.2

TTC8-215, Transcript of tetratricopeptide repeat domain 8, human

TSL 5

Gene TTC8, Length 794 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TTC8-215	ENST00000557580	VAMP2	P63027	116 aa		4.62	□□□□□ -1.67
TTC8-215	ENST00000557580	GNG5	P63218	68 aa		4.62	□□□□□ -1.67
TTC8-215	ENST00000557580	IAH1	Q2TAA2	248 aa	Predicted RBP	4.62	□□□□□ -1.67
TTC8-215	ENST00000557580	SAPCD1	Q5SSQ6	148 aa		4.62	□□□□□ -1.67
TTC8-215	ENST00000557580	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	4.62	□□□□□ -1.67
TTC8-215	ENST00000557580	PRNT	Q86SH4	94 aa		4.62	□□□□□ -1.67
TTC8-215	ENST00000557580	OR5A1	Q8NGJ0	315 aa		4.62	□□□□□ -1.67
TTC8-215	ENST00000557580	CAMK2N2	Q96S95	79 aa		4.62	□□□□□ -1.67
TTC8-215	ENST00000557580	IGLV8-61	A0A075B6I0	122 aa		4.61	□□□□□ -1.67
TTC8-215	ENST00000557580	IGKV2D-26	A0A0A0MRZ7	120 aa		4.61	□□□□□ -1.67
TTC8-215	ENST00000557580	GRIFIN	A4D1Z8	144 aa		4.61	□□□□□ -1.67
TTC8-215	ENST00000557580	C19orf71	A6NCJ1	209 aa		4.61	□□□□□ -1.67
TTC8-215	ENST00000557580	TNFRSF6B	O95407	300 aa		4.61	□□□□□ -1.67
TTC8-215	ENST00000557580	IGKV2-30	P06310	120 aa		4.61	□□□□□ -1.67
TTC8-215	ENST00000557580	PPP1R1A	Q13522	171 aa		4.61	□□□□□ -1.67
TTC8-215	ENST00000557580	COX6B2	Q6YFQ2	88 aa		4.61	□□□□□ -1.67
TTC8-215	ENST00000557580	SMIM4	Q8WVI0	70 aa		4.61	□□□□□ -1.67
TTC8-215	ENST00000557580	NPCDR1	Q9BY65	106 aa		4.61	□□□□□ -1.67
TTC8-215	ENST00000557580	GSKIP	Q9P0R6	139 aa		4.61	□□□□□ -1.67
TTC8-215	ENST00000557580	TRAV34	A0A0B4J273	112 aa		4.6	□□□□□ -1.67
TTC8-215	ENST00000557580	ANKRD20A5P	A0PJZ0	165 aa		4.6	□□□□□ -1.67
TTC8-215	ENST00000557580		M0QXV9	152 aa		4.6	□□□□□ -1.67
TTC8-215	ENST00000557580	RPL28	P46779	137 aa	Known RBP	4.6	□□□□□ -1.67
TTC8-215	ENST00000557580	TAS2R45	P59539	299 aa		4.6	□□□□□ -1.67
TTC8-215	ENST00000557580	FAM229B	Q4G0N7	80 aa		4.6	□□□□□ -1.67
TTC8-215	ENST00000557580	C10orf25	Q5T742	122 aa		4.6	□□□□□ -1.67
TTC8-215	ENST00000557580	SPAG11A	Q6PDA7	123 aa		4.6	□□□□□ -1.67
TTC8-215	ENST00000557580	DAND5	Q8N907	189 aa		4.6	□□□□□ -1.67
TTC8-215	ENST00000557580	OPRPN	Q99935	248 aa	Predicted RBP	4.6	□□□□□ -1.67
TTC8-215	ENST00000557580	KRBOX1	C9JBD0	128 aa		4.59	□□□□□ -1.67
TTC8-215	ENST00000557580	NUPR1	O60356	82 aa		4.59	□□□□□ -1.67
TTC8-215	ENST00000557580	ESD	P10768	282 aa		4.59	□□□□□ -1.67
TTC8-215	ENST00000557580	RPL12	P30050	165 aa	Known RBP	4.59	□□□□□ -1.67
TTC8-215	ENST00000557580	FLI1	Q01543	452 aa	Predicted RBP	4.59	□□□□□ -1.67
TTC8-215	ENST00000557580	IL18	Q14116	193 aa		4.59	□□□□□ -1.67
TTC8-215	ENST00000557580	ATP6V1F	Q16864	119 aa		4.59	□□□□□ -1.67
TTC8-215	ENST00000557580	KHDC3L	Q587J8	217 aa		4.59	□□□□□ -1.67
TTC8-215	ENST00000557580	LINC00242	Q5T6M2	205 aa		4.59	□□□□□ -1.67
TTC8-215	ENST00000557580	AP3S1	Q92572	193 aa		4.59	□□□□□ -1.67
TTC8-215	ENST00000557580	MRPS26	Q9BYN8	205 aa	Known RBP	4.59	□□□□□ -1.67
TTC8-215	ENST00000557580	RSL24D1	Q9UHA3	163 aa	Known RBP	4.59	□□□□□ -1.67
TTC8-215	ENST00000557580		M0R036	132 aa		4.58	□□□□□ -1.68
TTC8-215	ENST00000557580	CCL25	O15444	150 aa		4.58	□□□□□ -1.68
TTC8-215	ENST00000557580	TCRA	P04437	139 aa		4.58	□□□□□ -1.68
TTC8-215	ENST00000557580	TMBIM6	P55061	237 aa		4.58	□□□□□ -1.68
TTC8-215	ENST00000557580	HBG1	P69891	147 aa		4.58	□□□□□ -1.68
TTC8-215	ENST00000557580	HBG2	P69892	147 aa		4.58	□□□□□ -1.68
TTC8-215	ENST00000557580	AMMECR1L	Q6DCA0	310 aa		4.58	□□□□□ -1.68
TTC8-215	ENST00000557580	C2orf48	Q96LS8	159 aa		4.58	□□□□□ -1.68
TTC8-215	ENST00000557580	IMMP2L	Q96T52	175 aa		4.58	□□□□□ -1.68
TTC8-215	ENST00000557580	CTDSP1	Q9GZU7	261 aa		4.58	□□□□□ -1.68
TTC8-215	ENST00000557580	UBE2D4	Q9Y2X8	147 aa		4.58	□□□□□ -1.68
TTC8-215	ENST00000557580	BCL2L11	O43521	198 aa		4.57	□□□□□ -1.68
TTC8-215	ENST00000557580	SULT1A1	P50225	295 aa		4.57	□□□□□ -1.68
TTC8-215	ENST00000557580	TWIST1	Q15672	202 aa		4.57	□□□□□ -1.68
TTC8-215	ENST00000557580	NEDD8	Q15843	81 aa		4.57	□□□□□ -1.68
TTC8-215	ENST00000557580	OR2D3	Q8NGH3	330 aa		4.57	□□□□□ -1.68
TTC8-215	ENST00000557580	MCFD2	Q8NI22	146 aa		4.57	□□□□□ -1.68
TTC8-215	ENST00000557580	PGLYRP4	Q96LB8	373 aa		4.57	□□□□□ -1.68
TTC8-215	ENST00000557580	SLC25A21	Q9BQT8	299 aa	Predicted RBP	4.57	□□□□□ -1.68
TTC8-215	ENST00000557580	C11orf1	Q9H5F2	150 aa		4.57	□□□□□ -1.68
TTC8-215	ENST00000557580	KCNIP2	Q9NS61	270 aa		4.57	□□□□□ -1.68
TTC8-215	ENST00000557580	FLG	P20930	4061 aa	Predicted RBP	4.56	□□□□□ -1.68
TTC8-215	ENST00000557580	SMIM17	P0DL12	118 aa		4.56	□□□□□ -1.68
TTC8-215	ENST00000557580	PCOTH	Q58A44	107 aa		4.56	□□□□□ -1.68
TTC8-215	ENST00000557580	RNASEK	Q6P5S7	137 aa	Known RBP	4.56	□□□□□ -1.68
TTC8-215	ENST00000557580	CD164L2	Q6UWJ8	174 aa		4.56	□□□□□ -1.68
TTC8-215	ENST00000557580	STX12	Q86Y82	276 aa		4.56	□□□□□ -1.68
TTC8-215	ENST00000557580	KRTAP7-1	Q8IUC3	87 aa		4.56	□□□□□ -1.68
TTC8-215	ENST00000557580	C5orf17	Q8NAS9	161 aa		4.56	□□□□□ -1.68
TTC8-215	ENST00000557580	LINC00959	A0A1B0GUT2	108 aa		4.55	□□□□□ -1.68
TTC8-215	ENST00000557580	C9orf170	A2RU37	121 aa		4.55	□□□□□ -1.68
TTC8-215	ENST00000557580	FAU	P35544	74 aa	Known RBP	4.55	□□□□□ -1.68
TTC8-215	ENST00000557580	COTL1	Q14019	142 aa		4.55	□□□□□ -1.68
TTC8-215	ENST00000557580	NRAC	Q8N912	160 aa		4.55	□□□□□ -1.68
TTC8-215	ENST00000557580	THAP6	Q8TBB0	222 aa		4.55	□□□□□ -1.68
TTC8-215	ENST00000557580	ZNF471	Q9BX82	626 aa	Predicted RBP	4.55	□□□□□ -1.68
TTC8-215	ENST00000557580	LSM5	Q9Y4Y9	91 aa	Known RBP	4.55	□□□□□ -1.68
TTC8-215	ENST00000557580	TMSB15B	A0A087X1C1	80 aa		4.54	□□□□□ -1.68
TTC8-215	ENST00000557580		M0QY20	66 aa		4.54	□□□□□ -1.68
TTC8-215	ENST00000557580	PVALB	P20472	110 aa	Predicted RBP	4.54	□□□□□ -1.68
TTC8-215	ENST00000557580	NKX2-5	P52952	324 aa	Predicted RBP	4.54	□□□□□ -1.68
TTC8-215	ENST00000557580	GAGE2E	Q4V326	116 aa		4.54	□□□□□ -1.68
TTC8-215	ENST00000557580	PQLC2	Q6ZP29	291 aa		4.54	□□□□□ -1.68
TTC8-215	ENST00000557580	TMEM252	Q8N6L7	170 aa		4.54	□□□□□ -1.68
TTC8-215	ENST00000557580	GAGE2D	Q9UEU5	116 aa		4.54	□□□□□ -1.68
TTC8-215	ENST00000557580	NDUFA12	Q9UI09	145 aa		4.54	□□□□□ -1.68
TTC8-215	ENST00000557580	MUC12	Q9UKN1	5478 aa		4.53	□□□□□ -1.68
TTC8-215	ENST00000557580	C17orf112	F2Z3M2	114 aa		4.53	□□□□□ -1.68
TTC8-215	ENST00000557580	TLX1NB	P0CAT3	122 aa		4.53	□□□□□ -1.68
TTC8-215	ENST00000557580	NCS1	P62166	190 aa		4.53	□□□□□ -1.68
TTC8-215	ENST00000557580	MPLKIP	Q8TAP9	179 aa		4.53	□□□□□ -1.68
TTC8-215	ENST00000557580	MRPL35	Q9NZE8	188 aa	Known RBP	4.53	□□□□□ -1.68
TTC8-215	ENST00000557580	EPDR1	Q9UM22	224 aa		4.53	□□□□□ -1.68
TTC8-215	ENST00000557580	ARL2-SNX15	V9GYD0	113 aa		4.53	□□□□□ -1.68
TTC8-215	ENST00000557580	IGSF23	A1L1A6	192 aa		4.52	□□□□□ -1.69
TTC8-215	ENST00000557580		H7C423	109 aa		4.52	□□□□□ -1.69
TTC8-215	ENST00000557580	RGS5	O15539	181 aa		4.52	□□□□□ -1.69
TTC8-215	ENST00000557580	BCE1	O60756	84 aa		4.52	□□□□□ -1.69
TTC8-215	ENST00000557580	SH2D1A	O60880	128 aa		4.52	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms