RNA–Protein interactions for RNA: ENST00000549417.5

LIN7A-202, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 905 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-202ENST00000549417 Q9H521 79 aa3.9□□□□□ -1.79
LIN7A-202ENST00000549417 VCX3AQ9NNX9 186 aa3.9□□□□□ -1.79
LIN7A-202ENST00000549417 ANAPC11Q9NYG5 84 aa3.9□□□□□ -1.79
LIN7A-202ENST00000549417 RSL24D1Q9UHA3 163 aaKnown RBP3.9□□□□□ -1.79
LIN7A-202ENST00000549417 IGLV4-69A0A075B6H9 119 aa3.89□□□□□ -1.79
LIN7A-202ENST00000549417 IGHV1-58A0A0C4DH39 117 aa3.89□□□□□ -1.79
LIN7A-202ENST00000549417 SH2D1AO60880 128 aa3.89□□□□□ -1.79
LIN7A-202ENST00000549417 PVALBP20472 110 aaPredicted RBP3.89□□□□□ -1.79
LIN7A-202ENST00000549417 RPL12P30050 165 aaKnown RBP3.89□□□□□ -1.79
LIN7A-202ENST00000549417 CRIP1P50238 77 aa3.89□□□□□ -1.79
LIN7A-202ENST00000549417 UBE2BP63146 152 aa3.89□□□□□ -1.79
LIN7A-202ENST00000549417 SAPCD1Q5SSQ6 148 aa3.89□□□□□ -1.79
LIN7A-202ENST00000549417 DNLZQ5SXM8 178 aa3.89□□□□□ -1.79
LIN7A-202ENST00000549417 C5orf17Q8NAS9 161 aa3.89□□□□□ -1.79
LIN7A-202ENST00000549417 ARL2-SNX15V9GYD0 113 aa3.89□□□□□ -1.79
LIN7A-202ENST00000549417 SERTM2A0A1B0GWG4 89 aa3.88□□□□□ -1.79
LIN7A-202ENST00000549417 M0R2T5 61 aa3.88□□□□□ -1.79
LIN7A-202ENST00000549417 APOMO95445 188 aa3.88□□□□□ -1.79
LIN7A-202ENST00000549417 AP3S2P59780 193 aa3.88□□□□□ -1.79
LIN7A-202ENST00000549417 SEC61BP60468 96 aaKnown RBP3.88□□□□□ -1.79
LIN7A-202ENST00000549417 PYDC2Q56P42 97 aa3.88□□□□□ -1.79
LIN7A-202ENST00000549417 NUP35Q8NFH5 326 aa3.88□□□□□ -1.79
LIN7A-202ENST00000549417 OR10AG1Q8NH19 301 aa3.88□□□□□ -1.79
LIN7A-202ENST00000549417 ZNF471Q9BX82 626 aaPredicted RBP3.88□□□□□ -1.79
LIN7A-202ENST00000549417 WDR61Q9GZS3 305 aaKnown RBP3.88□□□□□ -1.79
LIN7A-202ENST00000549417 KCNIP2Q9NS61 270 aa3.88□□□□□ -1.79
LIN7A-202ENST00000549417 A0A087WXM4 84 aa3.87□□□□□ -1.79
LIN7A-202ENST00000549417 C17orf112F2Z3M2 114 aa3.87□□□□□ -1.79
LIN7A-202ENST00000549417 CCL25O15444 150 aa3.87□□□□□ -1.79
LIN7A-202ENST00000549417 TSHBP01222 138 aa3.87□□□□□ -1.79
LIN7A-202ENST00000549417 ARL14EPLP0DKL9 152 aa3.87□□□□□ -1.79
LIN7A-202ENST00000549417 NKX2-5P52952 324 aaPredicted RBP3.87□□□□□ -1.79
LIN7A-202ENST00000549417 RAB32Q13637 225 aa3.87□□□□□ -1.79
LIN7A-202ENST00000549417 SPCS2Q15005 226 aa3.87□□□□□ -1.79
LIN7A-202ENST00000549417 KRTAP13-2Q52LG2 175 aa3.87□□□□□ -1.79
LIN7A-202ENST00000549417 LINC00304Q8N9R0 145 aa3.87□□□□□ -1.79
LIN7A-202ENST00000549417 OR5A1Q8NGJ0 315 aa3.87□□□□□ -1.79
LIN7A-202ENST00000549417 ISOC2Q96AB3 205 aa3.87□□□□□ -1.79
LIN7A-202ENST00000549417 CAMK2N2Q96S95 79 aa3.87□□□□□ -1.79
LIN7A-202ENST00000549417 MRPS26Q9BYN8 205 aaKnown RBP3.87□□□□□ -1.79
LIN7A-202ENST00000549417 EPDR1Q9UM22 224 aa3.87□□□□□ -1.79
LIN7A-202ENST00000549417 A0A1W2PPV4 95 aa3.86□□□□□ -1.79
LIN7A-202ENST00000549417 H3BMQ9 156 aa3.86□□□□□ -1.79
LIN7A-202ENST00000549417 ZNF861PO60384 105 aa3.86□□□□□ -1.79
LIN7A-202ENST00000549417 MGPP08493 103 aa3.86□□□□□ -1.79
LIN7A-202ENST00000549417 LRRC37A5PQ49AS3 106 aa3.86□□□□□ -1.79
LIN7A-202ENST00000549417 AMMECR1LQ6DCA0 310 aa3.86□□□□□ -1.79
LIN7A-202ENST00000549417 RNASEKQ6P5S7 137 aaKnown RBP3.86□□□□□ -1.79
LIN7A-202ENST00000549417 PQLC2Q6ZP29 291 aa3.86□□□□□ -1.79
LIN7A-202ENST00000549417 TSKUQ8WUA8 353 aa3.86□□□□□ -1.79
LIN7A-202ENST00000549417 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.85□□□□□ -1.79
LIN7A-202ENST00000549417 IGKV2-29A2NJV5 120 aaPredicted RBP3.85□□□□□ -1.79
LIN7A-202ENST00000549417 M0QXV9 152 aa3.85□□□□□ -1.79
LIN7A-202ENST00000549417 M0QY20 66 aa3.85□□□□□ -1.79
LIN7A-202ENST00000549417 NDUFB6O95139 128 aa3.85□□□□□ -1.79
LIN7A-202ENST00000549417 SMIM17P0DL12 118 aa3.85□□□□□ -1.79
LIN7A-202ENST00000549417 KRTAP13-3Q3SY46 172 aa3.85□□□□□ -1.79
LIN7A-202ENST00000549417 Q86TA4 180 aa3.85□□□□□ -1.79
LIN7A-202ENST00000549417 KRTAP7-1Q8IUC3 87 aa3.85□□□□□ -1.79
LIN7A-202ENST00000549417 LINC00959A0A1B0GUT2 108 aa3.84□□□□□ -1.79
LIN7A-202ENST00000549417 C9orf118A6NHY6 69 aa3.84□□□□□ -1.79
LIN7A-202ENST00000549417 BCL2L11O43521 198 aa3.84□□□□□ -1.79
LIN7A-202ENST00000549417 COTL1Q14019 142 aa3.84□□□□□ -1.79
LIN7A-202ENST00000549417 RNF151Q2KHN1 245 aa3.84□□□□□ -1.79
LIN7A-202ENST00000549417 SPANXN1Q5VSR9 72 aa3.84□□□□□ -1.79
LIN7A-202ENST00000549417 SUMO4Q6EEV6 95 aa3.84□□□□□ -1.79
LIN7A-202ENST00000549417 MALP21145 153 aa3.83□□□□□ -1.8
LIN7A-202ENST00000549417 GCHFRP30047 84 aa3.83□□□□□ -1.8
LIN7A-202ENST00000549417 GAGE2EQ4V326 116 aa3.83□□□□□ -1.8
LIN7A-202ENST00000549417 NUDT10Q8NFP7 164 aa3.83□□□□□ -1.8
LIN7A-202ENST00000549417 NUDT11Q96G61 164 aa3.83□□□□□ -1.8
LIN7A-202ENST00000549417 SMIM3Q9BZL3 60 aa3.83□□□□□ -1.8
LIN7A-202ENST00000549417 GAGE2DQ9UEU5 116 aa3.83□□□□□ -1.8
LIN7A-202ENST00000549417 C19orf71A6NCJ1 209 aa3.82□□□□□ -1.8
LIN7A-202ENST00000549417 KRTAP4-16G5E9R7 235 aaPredicted RBP3.82□□□□□ -1.8
LIN7A-202ENST00000549417 SCGB1C1Q8TD33 95 aa3.82□□□□□ -1.8
LIN7A-202ENST00000549417 PGLYRP4Q96LB8 373 aa3.82□□□□□ -1.8
LIN7A-202ENST00000549417 SEC22CQ9BRL7 303 aa3.82□□□□□ -1.8
LIN7A-202ENST00000549417 PEX7O00628 323 aa3.81□□□□□ -1.8
LIN7A-202ENST00000549417 CDC34P49427 236 aaPredicted RBP3.81□□□□□ -1.8
LIN7A-202ENST00000549417 DEFA1P59665 94 aa3.81□□□□□ -1.8
LIN7A-202ENST00000549417 UBE2G2P60604 165 aa3.81□□□□□ -1.8
LIN7A-202ENST00000549417 IL15RAQ13261 267 aa3.81□□□□□ -1.8
LIN7A-202ENST00000549417 SS18Q15532 418 aa3.81□□□□□ -1.8
LIN7A-202ENST00000549417 CD164L2Q6UWJ8 174 aa3.81□□□□□ -1.8
LIN7A-202ENST00000549417 Q6ZNX1 250 aa3.81□□□□□ -1.8
LIN7A-202ENST00000549417 AP1S3Q96PC3 154 aa3.81□□□□□ -1.8
LIN7A-202ENST00000549417 CTDSP1Q9GZU7 261 aa3.81□□□□□ -1.8
LIN7A-202ENST00000549417 V9GYH0 126 aa3.81□□□□□ -1.8
LIN7A-202ENST00000549417 COX7A2LO14548 114 aa3.8□□□□□ -1.8
LIN7A-202ENST00000549417 SNAI2O43623 268 aa3.8□□□□□ -1.8
LIN7A-202ENST00000549417 STAG3L2P0CL84 134 aa3.8□□□□□ -1.8
LIN7A-202ENST00000549417 STAG3L3P0CL85 134 aa3.8□□□□□ -1.8
LIN7A-202ENST00000549417 BTCP35070 178 aa3.8□□□□□ -1.8
LIN7A-202ENST00000549417 LINC00242Q5T6M2 205 aa3.8□□□□□ -1.8
LIN7A-202ENST00000549417 RASL11AQ6T310 242 aa3.8□□□□□ -1.8
LIN7A-202ENST00000549417 RAB24Q969Q5 203 aa3.8□□□□□ -1.8
LIN7A-202ENST00000549417 H0YIZ8 118 aa3.79□□□□□ -1.8
LIN7A-202ENST00000549417 SIX6O95475 246 aa3.79□□□□□ -1.8
LIN7A-202ENST00000549417 ATP6V1G2O95670 118 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms