RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 LOC100131303A0A0U1RQF7 123 aa9.13□□□□□ -0.95
CPNE3-205ENST00000522240 GAGE12JA6NER3 117 aa9.13□□□□□ -0.95
CPNE3-205ENST00000522240 I3L3M4 83 aa9.13□□□□□ -0.95
CPNE3-205ENST00000522240 LINC00614P0C842 121 aa9.13□□□□□ -0.95
CPNE3-205ENST00000522240 GYPEP15421 78 aa9.13□□□□□ -0.95
CPNE3-205ENST00000522240 GAGE1Q13065 139 aa9.13□□□□□ -0.95
CPNE3-205ENST00000522240 GAGE4Q13068 117 aa9.13□□□□□ -0.95
CPNE3-205ENST00000522240 GAGE5Q13069 117 aa9.13□□□□□ -0.95
CPNE3-205ENST00000522240 GAGE13Q4V321 117 aa9.13□□□□□ -0.95
CPNE3-205ENST00000522240 RNASEKQ6P5S7 137 aaKnown RBP9.13□□□□□ -0.95
CPNE3-205ENST00000522240 NIT1Q86X76 327 aa9.13□□□□□ -0.95
CPNE3-205ENST00000522240 SH2D6Q7Z4S9 175 aa9.12□□□□□ -0.95
CPNE3-205ENST00000522240 ICOSQ9Y6W8 199 aa9.12□□□□□ -0.95
CPNE3-205ENST00000522240 A0A0J9YY99 117 aa9.11□□□□□ -0.95
CPNE3-205ENST00000522240 C5orf52A6NGY3 159 aa9.11□□□□□ -0.95
CPNE3-205ENST00000522240 HSBP1O75506 76 aa9.11□□□□□ -0.95
CPNE3-205ENST00000522240 MRPL23Q16540 153 aaKnown RBP9.11□□□□□ -0.95
CPNE3-205ENST00000522240 ORMDL2Q53FV1 153 aa9.11□□□□□ -0.95
CPNE3-205ENST00000522240 TMEM97Q5BJF2 176 aa9.11□□□□□ -0.95
CPNE3-205ENST00000522240 NEGR1Q7Z3B1 354 aa9.11□□□□□ -0.95
CPNE3-205ENST00000522240 TSHBP01222 138 aa9.1□□□□□ -0.95
CPNE3-205ENST00000522240 FCER1GP30273 86 aa9.1□□□□□ -0.95
CPNE3-205ENST00000522240 COTL1Q14019 142 aa9.1□□□□□ -0.95
CPNE3-205ENST00000522240 LAGE3Q14657 143 aa9.1□□□□□ -0.95
CPNE3-205ENST00000522240 WWC2-AS2Q96NR7 200 aa9.1□□□□□ -0.95
CPNE3-205ENST00000522240 ZNF561-AS1K7EIQ3 104 aa9.09□□□□□ -0.95
CPNE3-205ENST00000522240 C15orf53Q8NAA6 179 aa9.09□□□□□ -0.95
CPNE3-205ENST00000522240 ATP6V0E2Q8NHE4 81 aa9.09□□□□□ -0.95
CPNE3-205ENST00000522240 PHLDA1Q8WV24 401 aaPredicted RBP9.09□□□□□ -0.95
CPNE3-205ENST00000522240 GTSF1LQ9H1H1 148 aa9.09□□□□□ -0.95
CPNE3-205ENST00000522240 A0A096LPF7 62 aa9.08□□□□□ -0.96
CPNE3-205ENST00000522240 IGHV1-24A0A0C4DH33 117 aa9.08□□□□□ -0.96
CPNE3-205ENST00000522240 IGHV3-38A0A0C4DH36 116 aa9.08□□□□□ -0.96
CPNE3-205ENST00000522240 LINC01549A6NIU2 74 aa9.08□□□□□ -0.96
CPNE3-205ENST00000522240 NUPR1O60356 82 aa9.08□□□□□ -0.96
CPNE3-205ENST00000522240 G0S2P27469 103 aa9.08□□□□□ -0.96
CPNE3-205ENST00000522240 SNRPEP62304 92 aaKnown RBP9.08□□□□□ -0.96
CPNE3-205ENST00000522240 HIST3H2BBQ8N257 126 aa9.08□□□□□ -0.96
CPNE3-205ENST00000522240 PACRGQ96M98 296 aaPredicted RBP9.08□□□□□ -0.96
CPNE3-205ENST00000522240 HBDP02042 147 aa9.07□□□□□ -0.96
CPNE3-205ENST00000522240 AMTP48728 403 aa9.07□□□□□ -0.96
CPNE3-205ENST00000522240 A0A096LNJ9 63 aa9.06□□□□□ -0.96
CPNE3-205ENST00000522240 NUDT3O95989 172 aa9.06□□□□□ -0.96
CPNE3-205ENST00000522240 S100A2P29034 98 aa9.06□□□□□ -0.96
CPNE3-205ENST00000522240 TIRAPP58753 221 aa9.06□□□□□ -0.96
CPNE3-205ENST00000522240 TRBV25-1A0A075B6N4 114 aa9.05□□□□□ -0.96
CPNE3-205ENST00000522240 TRBV6-8A0A0A6YYG3 113 aa9.05□□□□□ -0.96
CPNE3-205ENST00000522240 NUPR2A6NF83 97 aa9.05□□□□□ -0.96
CPNE3-205ENST00000522240 PDZD11Q5EBL8 140 aa9.05□□□□□ -0.96
CPNE3-205ENST00000522240 NTM-AS1Q6ZSK4 140 aa9.05□□□□□ -0.96
CPNE3-205ENST00000522240 FAM19A2Q8N3H0 131 aa9.05□□□□□ -0.96
CPNE3-205ENST00000522240 TMEM18Q96B42 140 aa9.05□□□□□ -0.96
CPNE3-205ENST00000522240 CHCHD7Q9BUK0 85 aa9.05□□□□□ -0.96
CPNE3-205ENST00000522240 CYSLTR1Q9Y271 337 aa9.05□□□□□ -0.96
CPNE3-205ENST00000522240 BTF3P20290 206 aaKnown RBP9.04□□□□□ -0.96
CPNE3-205ENST00000522240 PMCHL1Q16048 86 aa9.04□□□□□ -0.96
CPNE3-205ENST00000522240 C2orf66Q6UXQ4 117 aa9.04□□□□□ -0.96
CPNE3-205ENST00000522240 C20orf203Q8NBC4 194 aa9.04□□□□□ -0.96
CPNE3-205ENST00000522240 TOMM6Q96B49 74 aa9.04□□□□□ -0.96
CPNE3-205ENST00000522240 TMEM243Q9BU79 118 aa9.04□□□□□ -0.96
CPNE3-205ENST00000522240 H7C423 109 aa9.03□□□□□ -0.96
CPNE3-205ENST00000522240 CEMP1Q6PRD7 247 aaPredicted RBP9.03□□□□□ -0.96
CPNE3-205ENST00000522240 HIST1H2BLQ99880 126 aa9.03□□□□□ -0.96
CPNE3-205ENST00000522240 IFITM10A6NMD0 228 aa9.02□□□□□ -0.97
CPNE3-205ENST00000522240 LEPROTL1O95214 131 aa9.02□□□□□ -0.97
CPNE3-205ENST00000522240 SMAGPQ0VAQ4 97 aa9.02□□□□□ -0.97
CPNE3-205ENST00000522240 LELP1Q5T871 98 aa9.02□□□□□ -0.97
CPNE3-205ENST00000522240 DEFB104AQ8WTQ1 72 aa9.02□□□□□ -0.97
CPNE3-205ENST00000522240 HSPB8Q9UJY1 196 aa9.02□□□□□ -0.97
CPNE3-205ENST00000522240 KLK5Q9Y337 293 aaPredicted RBP9.02□□□□□ -0.97
CPNE3-205ENST00000522240 IGLL5B9A064 214 aa9.01□□□□□ -0.97
CPNE3-205ENST00000522240 NPSP0C0P6 89 aa9.01□□□□□ -0.97
CPNE3-205ENST00000522240 TCTAP57738 103 aa9.01□□□□□ -0.97
CPNE3-205ENST00000522240 TIMM17AQ99595 171 aa9.01□□□□□ -0.97
CPNE3-205ENST00000522240 TIMM21Q9BVV7 248 aa9.01□□□□□ -0.97
CPNE3-205ENST00000522240 SPANXA1Q9NS26 97 aa9.01□□□□□ -0.97
CPNE3-205ENST00000522240 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9□□□□□ -0.97
CPNE3-205ENST00000522240 IGKV2-29A2NJV5 120 aaPredicted RBP9□□□□□ -0.97
CPNE3-205ENST00000522240 UBE2L6O14933 153 aa9□□□□□ -0.97
CPNE3-205ENST00000522240 ATP5LO75964 103 aa9□□□□□ -0.97
CPNE3-205ENST00000522240 FABP4P15090 132 aa9□□□□□ -0.97
CPNE3-205ENST00000522240 PKIAP61925 76 aa9□□□□□ -0.97
CPNE3-205ENST00000522240 RPL39P62891 51 aaKnown RBP9□□□□□ -0.97
CPNE3-205ENST00000522240 LYPD5Q6UWN5 251 aa9□□□□□ -0.97
CPNE3-205ENST00000522240 ERASQ7Z444 233 aa9□□□□□ -0.97
CPNE3-205ENST00000522240 MRPL52Q86TS9 123 aaKnown RBP9□□□□□ -0.97
CPNE3-205ENST00000522240 PYGO1Q9Y3Y4 419 aa9□□□□□ -0.97
CPNE3-205ENST00000522240 DNAH7Q8WXX0 4024 aa8.99□□□□□ -0.97
CPNE3-205ENST00000522240 C3orf84H3BNL1 204 aa8.99□□□□□ -0.97
CPNE3-205ENST00000522240 ZNF25P17030 456 aaPredicted RBP8.99□□□□□ -0.97
CPNE3-205ENST00000522240 TMEM141Q96I45 108 aa8.99□□□□□ -0.97
CPNE3-205ENST00000522240 SCGB3A1Q96QR1 104 aa8.99□□□□□ -0.97
CPNE3-205ENST00000522240 CHCHD5Q9BSY4 110 aa8.99□□□□□ -0.97
CPNE3-205ENST00000522240 UBE2D4Q9Y2X8 147 aa8.99□□□□□ -0.97
CPNE3-205ENST00000522240 CSDC2Q9Y534 153 aaKnown RBP8.99□□□□□ -0.97
CPNE3-205ENST00000522240 DYNC2H1Q8NCM8 4307 aaKnown RBP8.98□□□□□ -0.97
CPNE3-205ENST00000522240 IGIPA6NJ69 53 aa8.98□□□□□ -0.97
CPNE3-205ENST00000522240 MUC7Q8TAX7 377 aa8.98□□□□□ -0.97
CPNE3-205ENST00000522240 IFI27L1Q96BM0 104 aa8.98□□□□□ -0.97
CPNE3-205ENST00000522240 APLNQ9ULZ1 77 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms