RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 KHDC3LQ587J8 217 aa1.55□□□□□ -2.16
HERC4-215ENST00000515753 Q6ZTI0 123 aa1.55□□□□□ -2.16
HERC4-215ENST00000515753 SBSPONQ8IVN8 264 aa1.55□□□□□ -2.16
HERC4-215ENST00000515753 Q8N6K4 173 aa1.55□□□□□ -2.16
HERC4-215ENST00000515753 LINC00304Q8N9R0 145 aa1.55□□□□□ -2.16
HERC4-215ENST00000515753 OR5A1Q8NGJ0 315 aa1.55□□□□□ -2.16
HERC4-215ENST00000515753 MYOZ3Q8TDC0 251 aa1.55□□□□□ -2.16
HERC4-215ENST00000515753 DCANP1Q8TF63 244 aa1.55□□□□□ -2.16
HERC4-215ENST00000515753 ARL11Q969Q4 196 aa1.55□□□□□ -2.16
HERC4-215ENST00000515753 USMG5Q96IX5 58 aa1.55□□□□□ -2.16
HERC4-215ENST00000515753 AMELYQ99218 206 aa1.55□□□□□ -2.16
HERC4-215ENST00000515753 MRPL32Q9BYC8 188 aaKnown RBP1.55□□□□□ -2.16
HERC4-215ENST00000515753 PRO2289Q9P1D8 64 aa1.55□□□□□ -2.16
HERC4-215ENST00000515753 ABRACLQ9P1F3 81 aa1.55□□□□□ -2.16
HERC4-215ENST00000515753 JPT1Q9UK76 154 aa1.55□□□□□ -2.16
HERC4-215ENST00000515753 ARHGAP32A7KAX9 2087 aa1.55□□□□□ -2.16
HERC4-215ENST00000515753 ALPK2Q86TB3 2170 aa1.55□□□□□ -2.16
HERC4-215ENST00000515753 CADP27708 2225 aa1.55□□□□□ -2.16
HERC4-215ENST00000515753 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.55□□□□□ -2.164e-6■■■■□ 24.8
HERC4-215ENST00000515753 EXPH5Q8NEV8 1989 aa1.54□□□□□ -2.16
HERC4-215ENST00000515753 TLN2Q9Y4G6 2542 aa1.54□□□□□ -2.16
HERC4-215ENST00000515753 A0A1B0GX51 115 aa1.54□□□□□ -2.16
HERC4-215ENST00000515753 TRDV1A0A1B0GX56 115 aa1.54□□□□□ -2.16
HERC4-215ENST00000515753 H3BSH0 61 aa1.54□□□□□ -2.16
HERC4-215ENST00000515753 TMEM256-PLSCR3K7ERE1 68 aa1.54□□□□□ -2.16
HERC4-215ENST00000515753 YPEL1O60688 119 aa1.54□□□□□ -2.16
HERC4-215ENST00000515753 TFF1P04155 84 aa1.54□□□□□ -2.16
HERC4-215ENST00000515753 ZNF93P35789 620 aaPredicted RBP1.54□□□□□ -2.16
HERC4-215ENST00000515753 HINT1P49773 126 aaPredicted RBP1.54□□□□□ -2.16
HERC4-215ENST00000515753 TMEM258P61165 79 aa1.54□□□□□ -2.16
HERC4-215ENST00000515753 PLGLAQ15195 96 aa1.54□□□□□ -2.16
HERC4-215ENST00000515753 CCDC58Q4VC31 144 aa1.54□□□□□ -2.16
HERC4-215ENST00000515753 LCN15Q6UWW0 184 aa1.54□□□□□ -2.16
HERC4-215ENST00000515753 PHF5AQ7RTV0 110 aaKnown RBP1.54□□□□□ -2.16
HERC4-215ENST00000515753 DEFB107AQ8IZN7 70 aa1.54□□□□□ -2.16
HERC4-215ENST00000515753 ACBD7Q8N6N7 88 aa1.54□□□□□ -2.16
HERC4-215ENST00000515753 SLC25A21Q9BQT8 299 aaPredicted RBP1.54□□□□□ -2.16
HERC4-215ENST00000515753 TMEM138Q9NPI0 162 aa1.54□□□□□ -2.16
HERC4-215ENST00000515753 GNG8Q9UK08 70 aa1.54□□□□□ -2.16
HERC4-215ENST00000515753 TRAPPC2LQ9UL33 140 aa1.54□□□□□ -2.16
HERC4-215ENST00000515753 MXRA5Q9NR99 2828 aa1.54□□□□□ -2.16
HERC4-215ENST00000515753 ARFGEF3Q5TH69 2177 aa1.54□□□□□ -2.16
HERC4-215ENST00000515753 MGAM2Q2M2H8 2515 aa1.54□□□□□ -2.16
HERC4-215ENST00000515753 A0A087WX48 190 aa1.53□□□□□ -2.16
HERC4-215ENST00000515753 TMSB15BA0A087X1C1 80 aa1.53□□□□□ -2.16
HERC4-215ENST00000515753 LOC107986453A0A1B0GWG9 222 aa1.53□□□□□ -2.16
HERC4-215ENST00000515753 A6NIN4 97 aa1.53□□□□□ -2.16
HERC4-215ENST00000515753 FAM223BA6NKX1 122 aa1.53□□□□□ -2.16
HERC4-215ENST00000515753 HMSDA8MTL9 139 aa1.53□□□□□ -2.16
HERC4-215ENST00000515753 J3KT08 172 aa1.53□□□□□ -2.16
HERC4-215ENST00000515753 ARPC5O15511 151 aa1.53□□□□□ -2.16
HERC4-215ENST00000515753 CST7O76096 145 aa1.53□□□□□ -2.16
HERC4-215ENST00000515753 NDUFA3O95167 84 aa1.53□□□□□ -2.16
HERC4-215ENST00000515753 LY6G6CO95867 125 aa1.53□□□□□ -2.16
HERC4-215ENST00000515753 IFNA4P05014 189 aa1.53□□□□□ -2.16
HERC4-215ENST00000515753 P0C880 135 aa1.53□□□□□ -2.16
HERC4-215ENST00000515753 TRGC1P0CF51 173 aa1.53□□□□□ -2.16
HERC4-215ENST00000515753 UBBP0CG47 229 aa1.53□□□□□ -2.16
HERC4-215ENST00000515753 DEFA4P12838 97 aa1.53□□□□□ -2.16
HERC4-215ENST00000515753 RPL7P18124 248 aaKnown RBP1.53□□□□□ -2.16
HERC4-215ENST00000515753 TPPP2P59282 170 aa1.53□□□□□ -2.16
HERC4-215ENST00000515753 SNRPGP62308 76 aaKnown RBP1.53□□□□□ -2.16
HERC4-215ENST00000515753 PSG9Q00887 426 aa1.53□□□□□ -2.16
HERC4-215ENST00000515753 CDK5R1Q15078 307 aa1.53□□□□□ -2.16
HERC4-215ENST00000515753 DEFB136Q30KP8 78 aa1.53□□□□□ -2.16
HERC4-215ENST00000515753 MORN2Q502X0 79 aa1.53□□□□□ -2.16
HERC4-215ENST00000515753 KIAA2026Q5HYC2 2103 aa1.53□□□□□ -2.16
HERC4-215ENST00000515753 C12orf73Q69YU5 71 aa1.53□□□□□ -2.16
HERC4-215ENST00000515753 EIF5AL1Q6IS14 154 aaKnown RBP1.53□□□□□ -2.16
HERC4-215ENST00000515753 UNQ5815/PRO19632Q6UWF5 114 aa1.53□□□□□ -2.16
HERC4-215ENST00000515753 C10orf99Q6UWK7 81 aa1.53□□□□□ -2.16
HERC4-215ENST00000515753 LINC00322Q6ZN03 302 aaPredicted RBP1.53□□□□□ -2.16
HERC4-215ENST00000515753 FAM223AQ8IWN6 122 aa1.53□□□□□ -2.16
HERC4-215ENST00000515753 OR5AK2Q8NH90 309 aa1.53□□□□□ -2.16
HERC4-215ENST00000515753 DYNLRB2Q8TF09 96 aa1.53□□□□□ -2.16
HERC4-215ENST00000515753 BORCS5Q969J3 196 aa1.53□□□□□ -2.16
HERC4-215ENST00000515753 CARD19Q96LW7 228 aa1.53□□□□□ -2.16
HERC4-215ENST00000515753 LINC00467Q9BRT7 94 aa1.53□□□□□ -2.16
HERC4-215ENST00000515753 PRADC1Q9BSG0 188 aa1.53□□□□□ -2.16
HERC4-215ENST00000515753 SVEP1Q4LDE5 3571 aa1.53□□□□□ -2.17
HERC4-215ENST00000515753 A0A1B0GVG6 124 aa1.52□□□□□ -2.17
HERC4-215ENST00000515753 A8MWV9 139 aa1.52□□□□□ -2.17
HERC4-215ENST00000515753 FNDC10F2Z333 226 aa1.52□□□□□ -2.17
HERC4-215ENST00000515753 G3V318 75 aa1.52□□□□□ -2.17
HERC4-215ENST00000515753 H7BYZ3 331 aa1.52□□□□□ -2.17
HERC4-215ENST00000515753 J3QLW9 94 aa1.52□□□□□ -2.17
HERC4-215ENST00000515753 GEMIN2O14893 280 aaKnown RBP1.52□□□□□ -2.17
HERC4-215ENST00000515753 PMP2P02689 132 aa1.52□□□□□ -2.17
HERC4-215ENST00000515753 SCTP09683 121 aa1.52□□□□□ -2.17
HERC4-215ENST00000515753 HIST1H1BP16401 226 aaKnown RBP1.52□□□□□ -2.17
HERC4-215ENST00000515753 S100A11P31949 105 aa1.52□□□□□ -2.17
HERC4-215ENST00000515753 AQP4P55087 323 aa1.52□□□□□ -2.17
HERC4-215ENST00000515753 DIAPH2-AS1Q14236 149 aa1.52□□□□□ -2.17
HERC4-215ENST00000515753 FXYD3Q14802 87 aa1.52□□□□□ -2.17
HERC4-215ENST00000515753 SS18Q15532 418 aa1.52□□□□□ -2.17
HERC4-215ENST00000515753 VMA21Q3ZAQ7 101 aa1.52□□□□□ -2.17
HERC4-215ENST00000515753 SPANXN5Q5MJ07 72 aa1.52□□□□□ -2.17
HERC4-215ENST00000515753 Q6ZQT0 140 aa1.52□□□□□ -2.17
HERC4-215ENST00000515753 ZNF833PQ6ZTB9 187 aa1.52□□□□□ -2.17
HERC4-215ENST00000515753 TMEM229BQ8NBD8 167 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms