RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 CACNG7P62955 275 aa6.61□□□□□ -1.35
SMARCC1-205ENST00000483847 A0A1W2PNN7 141 aa6.6□□□□□ -1.35
SMARCC1-205ENST00000483847 AKR1C3P42330 323 aa6.6□□□□□ -1.35
SMARCC1-205ENST00000483847 AMTP48728 403 aa6.6□□□□□ -1.35
SMARCC1-205ENST00000483847 FOXI1Q12951 378 aa6.6□□□□□ -1.35
SMARCC1-205ENST00000483847 PRR4Q16378 134 aa6.6□□□□□ -1.35
SMARCC1-205ENST00000483847 PGLYRP4Q96LB8 373 aa6.6□□□□□ -1.35
SMARCC1-205ENST00000483847 CARD19Q96LW7 228 aa6.6□□□□□ -1.35
SMARCC1-205ENST00000483847 MARVELD1Q9BSK0 173 aa6.6□□□□□ -1.35
SMARCC1-205ENST00000483847 IFITM3Q01628 133 aa6.59□□□□□ -1.35
SMARCC1-205ENST00000483847 CST9LP1Q5W188 147 aa6.59□□□□□ -1.35
SMARCC1-205ENST00000483847 RPL7L1Q6DKI1 246 aaKnown RBP6.59□□□□□ -1.35
SMARCC1-205ENST00000483847 RASL11AQ6T310 242 aa6.59□□□□□ -1.35
SMARCC1-205ENST00000483847 MLST8Q9BVC4 326 aa6.59□□□□□ -1.35
SMARCC1-205ENST00000483847 MT-ND6P03923 174 aa6.58□□□□□ -1.36
SMARCC1-205ENST00000483847 PTTG1IPP53801 180 aa6.58□□□□□ -1.36
SMARCC1-205ENST00000483847 MAP1LC3B2A6NCE7 125 aa6.57□□□□□ -1.36
SMARCC1-205ENST00000483847 XCL1P47992 114 aa6.57□□□□□ -1.36
SMARCC1-205ENST00000483847 FHITP49789 147 aa6.57□□□□□ -1.36
SMARCC1-205ENST00000483847 GAGE2BQ13066 116 aa6.57□□□□□ -1.36
SMARCC1-205ENST00000483847 COTL1Q14019 142 aa6.57□□□□□ -1.36
SMARCC1-205ENST00000483847 C1orf137Q5JT78 98 aa6.57□□□□□ -1.36
SMARCC1-205ENST00000483847 STOML3Q8TAV4 291 aa6.57□□□□□ -1.36
SMARCC1-205ENST00000483847 TPPP3Q9BW30 176 aa6.57□□□□□ -1.36
SMARCC1-205ENST00000483847 MAP1LC3BQ9GZQ8 125 aa6.57□□□□□ -1.36
SMARCC1-205ENST00000483847 NIT2Q9NQR4 276 aa6.57□□□□□ -1.36
SMARCC1-205ENST00000483847 PKIGQ9Y2B9 76 aa6.57□□□□□ -1.36
SMARCC1-205ENST00000483847 EIF4EBP3O60516 100 aaPredicted RBP6.56□□□□□ -1.36
SMARCC1-205ENST00000483847 UPK1BO75841 260 aa6.56□□□□□ -1.36
SMARCC1-205ENST00000483847 IGLC6P0CF74 106 aa6.56□□□□□ -1.36
SMARCC1-205ENST00000483847 SYCNQ0VAF6 134 aa6.56□□□□□ -1.36
SMARCC1-205ENST00000483847 BAGE2Q86Y30 109 aa6.56□□□□□ -1.36
SMARCC1-205ENST00000483847 TCEAL7Q9BRU2 100 aa6.56□□□□□ -1.36
SMARCC1-205ENST00000483847 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.55□□□□□ -1.36
SMARCC1-205ENST00000483847 IGHV1-58A0A0C4DH39 117 aa6.55□□□□□ -1.36
SMARCC1-205ENST00000483847 SCO2A0A1W2PP80 73 aa6.55□□□□□ -1.36
SMARCC1-205ENST00000483847 IGKV2-29A2NJV5 120 aaPredicted RBP6.55□□□□□ -1.36
SMARCC1-205ENST00000483847 PAGE4O60829 102 aa6.55□□□□□ -1.36
SMARCC1-205ENST00000483847 BCL2P10415 239 aa6.55□□□□□ -1.36
SMARCC1-205ENST00000483847 Q5BKY6 102 aa6.55□□□□□ -1.36
SMARCC1-205ENST00000483847 AMMECR1LQ6DCA0 310 aa6.55□□□□□ -1.36
SMARCC1-205ENST00000483847 RNASEKQ6P5S7 137 aaKnown RBP6.55□□□□□ -1.36
SMARCC1-205ENST00000483847 PHF5AQ7RTV0 110 aaKnown RBP6.55□□□□□ -1.36
SMARCC1-205ENST00000483847 MRPL18Q9H0U6 180 aaKnown RBP6.55□□□□□ -1.36
SMARCC1-205ENST00000483847 LOC107984640A0A0U1RRK4 108 aa6.54□□□□□ -1.36
SMARCC1-205ENST00000483847 CCL25O15444 150 aa6.54□□□□□ -1.36
SMARCC1-205ENST00000483847 IGLV7-43P04211 117 aa6.54□□□□□ -1.36
SMARCC1-205ENST00000483847 KRTAP1-4P0C5Y4 121 aa6.54□□□□□ -1.36
SMARCC1-205ENST00000483847 NTF3P20783 257 aa6.54□□□□□ -1.36
SMARCC1-205ENST00000483847 C9orf116Q5BN46 136 aaPredicted RBP6.54□□□□□ -1.36
SMARCC1-205ENST00000483847 AKR1C8PQ5T2L2 129 aa6.54□□□□□ -1.36
SMARCC1-205ENST00000483847 Q6ZNX1 250 aa6.54□□□□□ -1.36
SMARCC1-205ENST00000483847 KRTAP11-1Q8IUC1 163 aa6.54□□□□□ -1.36
SMARCC1-205ENST00000483847 FER1L6-AS1Q8NA97 138 aa6.54□□□□□ -1.36
SMARCC1-205ENST00000483847 DIRC1Q969H9 104 aa6.54□□□□□ -1.36
SMARCC1-205ENST00000483847 H0Y9J4 135 aa6.53□□□□□ -1.36
SMARCC1-205ENST00000483847 S100A9P06702 114 aaKnown RBP6.53□□□□□ -1.36
SMARCC1-205ENST00000483847 FGF6P10767 208 aa6.53□□□□□ -1.36
SMARCC1-205ENST00000483847 DEFA1P59665 94 aa6.53□□□□□ -1.36
SMARCC1-205ENST00000483847 OR5A1Q8NGJ0 315 aa6.53□□□□□ -1.36
SMARCC1-205ENST00000483847 MED28Q9H204 178 aa6.53□□□□□ -1.36
SMARCC1-205ENST00000483847 IGLV1-50A0A075B6I6 118 aa6.52□□□□□ -1.37
SMARCC1-205ENST00000483847 BORCS7-ASMTA0A0B4J1R7 106 aa6.52□□□□□ -1.37
SMARCC1-205ENST00000483847 LINC00959A0A1B0GUT2 108 aa6.52□□□□□ -1.37
SMARCC1-205ENST00000483847 ZNF561-AS1K7EIQ3 104 aa6.52□□□□□ -1.37
SMARCC1-205ENST00000483847 CAMPP49913 170 aa6.52□□□□□ -1.37
SMARCC1-205ENST00000483847 S100ZQ8WXG8 99 aa6.52□□□□□ -1.37
SMARCC1-205ENST00000483847 FSIP2Q5CZC0 6907 aa6.52□□□□□ -1.37
SMARCC1-205ENST00000483847 IGLV4-69A0A075B6H9 119 aa6.51□□□□□ -1.37
SMARCC1-205ENST00000483847 LINC00299Q6ZSB3 139 aa6.51□□□□□ -1.37
SMARCC1-205ENST00000483847 GATD1Q8NB37 220 aa6.51□□□□□ -1.37
SMARCC1-205ENST00000483847 ALG5Q9Y673 324 aa6.51□□□□□ -1.37
SMARCC1-205ENST00000483847 A0A1B0GV50 99 aa6.5□□□□□ -1.37
SMARCC1-205ENST00000483847 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.5□□□□□ -1.37
SMARCC1-205ENST00000483847 MEF2BQ02080 365 aaPredicted RBP6.5□□□□□ -1.37
SMARCC1-205ENST00000483847 TMUB2Q71RG4 321 aa6.5□□□□□ -1.37
SMARCC1-205ENST00000483847 NUP35Q8NFH5 326 aa6.5□□□□□ -1.37
SMARCC1-205ENST00000483847 OR2D3Q8NGH3 330 aa6.5□□□□□ -1.37
SMARCC1-205ENST00000483847 RPL39LQ96EH5 51 aaKnown RBP6.5□□□□□ -1.37
SMARCC1-205ENST00000483847 A0A087WZ39 114 aa6.49□□□□□ -1.37
SMARCC1-205ENST00000483847 H7C423 109 aa6.49□□□□□ -1.37
SMARCC1-205ENST00000483847 APOMO95445 188 aa6.49□□□□□ -1.37
SMARCC1-205ENST00000483847 APCSP02743 223 aa6.49□□□□□ -1.37
SMARCC1-205ENST00000483847 TRGC1P0CF51 173 aa6.49□□□□□ -1.37
SMARCC1-205ENST00000483847 RPL35P42766 123 aaKnown RBP6.49□□□□□ -1.37
SMARCC1-205ENST00000483847 RPL18AQ02543 176 aaKnown RBP6.49□□□□□ -1.37
SMARCC1-205ENST00000483847 LYZL1Q6UWQ5 148 aa6.49□□□□□ -1.37
SMARCC1-205ENST00000483847 MUC17Q685J3 4493 aa6.48□□□□□ -1.37
SMARCC1-205ENST00000483847 C19orf71A6NCJ1 209 aa6.48□□□□□ -1.37
SMARCC1-205ENST00000483847 NCR2O95944 276 aa6.48□□□□□ -1.37
SMARCC1-205ENST00000483847 ZNF25P17030 456 aaPredicted RBP6.48□□□□□ -1.37
SMARCC1-205ENST00000483847 UBE2D1P51668 147 aa6.48□□□□□ -1.37
SMARCC1-205ENST00000483847 RPS20P60866 119 aaKnown RBP6.48□□□□□ -1.37
SMARCC1-205ENST00000483847 EIF5AP63241 154 aaKnown RBP6.48□□□□□ -1.37
SMARCC1-205ENST00000483847 CD164L2Q6UWJ8 174 aa6.48□□□□□ -1.37
SMARCC1-205ENST00000483847 ISOC2Q96AB3 205 aa6.48□□□□□ -1.37
SMARCC1-205ENST00000483847 OPRPNQ99935 248 aaPredicted RBP6.48□□□□□ -1.37
SMARCC1-205ENST00000483847 FXYD6-FXYD2A0A087WZ82 144 aa6.47□□□□□ -1.37
SMARCC1-205ENST00000483847 FAM168BA1KXE4 195 aa6.47□□□□□ -1.37
SMARCC1-205ENST00000483847 F2Z2F3 143 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms