RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 OR5AL1P0C617 328 aa6.35□□□□□ -1.39
TNFAIP3-202ENST00000420009 NKX2-5P52952 324 aaPredicted RBP6.35□□□□□ -1.39
TNFAIP3-202ENST00000420009 MAJINQ3KP22 176 aa6.35□□□□□ -1.39
TNFAIP3-202ENST00000420009 Q5BKY6 102 aa6.35□□□□□ -1.39
TNFAIP3-202ENST00000420009 PRSS3P2Q8NHM4 247 aa6.35□□□□□ -1.39
TNFAIP3-202ENST00000420009 TCEAL7Q9BRU2 100 aa6.35□□□□□ -1.39
TNFAIP3-202ENST00000420009 IGKV2-24A0A0C4DH68 120 aa6.34□□□□□ -1.39
TNFAIP3-202ENST00000420009 MUC21A0A140T8X8 626 aa6.34□□□□□ -1.39
TNFAIP3-202ENST00000420009 F5H697 171 aa6.34□□□□□ -1.39
TNFAIP3-202ENST00000420009 RPS10P46783 165 aaKnown RBP6.34□□□□□ -1.39
TNFAIP3-202ENST00000420009 SRSF9Q13242 221 aaKnown RBP eCLIP6.34□□□□□ -1.39
TNFAIP3-202ENST00000420009 STPG4Q8N801 248 aa6.34□□□□□ -1.39
TNFAIP3-202ENST00000420009 M0QY20 66 aa6.33□□□□□ -1.4
TNFAIP3-202ENST00000420009 FHITP49789 147 aa6.33□□□□□ -1.4
TNFAIP3-202ENST00000420009 RAB5CP51148 216 aa6.33□□□□□ -1.4
TNFAIP3-202ENST00000420009 SPANXN1Q5VSR9 72 aa6.33□□□□□ -1.4
TNFAIP3-202ENST00000420009 INO80EQ8NBZ0 244 aaPredicted RBP6.33□□□□□ -1.4
TNFAIP3-202ENST00000420009 AP1S3Q96PC3 154 aa6.33□□□□□ -1.4
TNFAIP3-202ENST00000420009 TMEM243Q9BU79 118 aa6.33□□□□□ -1.4
TNFAIP3-202ENST00000420009 A0A096LNI7 61 aa6.32□□□□□ -1.4
TNFAIP3-202ENST00000420009 AKR1C3P42330 323 aa6.32□□□□□ -1.4
TNFAIP3-202ENST00000420009 RPL7L1Q6DKI1 246 aaKnown RBP6.32□□□□□ -1.4
TNFAIP3-202ENST00000420009 CFAP161Q6P656 301 aa6.32□□□□□ -1.4
TNFAIP3-202ENST00000420009 C9orf62Q8N4C0 152 aa6.32□□□□□ -1.4
TNFAIP3-202ENST00000420009 LYPD6BQ8NI32 183 aa6.32□□□□□ -1.4
TNFAIP3-202ENST00000420009 MLST8Q9BVC4 326 aa6.32□□□□□ -1.4
TNFAIP3-202ENST00000420009 GVQW2A0A096LPI5 108 aaPredicted RBP6.31□□□□□ -1.4
TNFAIP3-202ENST00000420009 MAP1LC3B2A6NCE7 125 aa6.31□□□□□ -1.4
TNFAIP3-202ENST00000420009 GAGE12HA6NDE8 117 aa6.31□□□□□ -1.4
TNFAIP3-202ENST00000420009 SMIM17P0DL12 118 aa6.31□□□□□ -1.4
TNFAIP3-202ENST00000420009 HIGD2BQ4VC39 106 aa6.31□□□□□ -1.4
TNFAIP3-202ENST00000420009 SUMO4Q6EEV6 95 aa6.31□□□□□ -1.4
TNFAIP3-202ENST00000420009 PGLYRP4Q96LB8 373 aa6.31□□□□□ -1.4
TNFAIP3-202ENST00000420009 MAP1LC3BQ9GZQ8 125 aa6.31□□□□□ -1.4
TNFAIP3-202ENST00000420009 HMSDA8MTL9 139 aa6.3□□□□□ -1.4
TNFAIP3-202ENST00000420009 H7C1H1 209 aa6.3□□□□□ -1.4
TNFAIP3-202ENST00000420009 SULT1A2P50226 295 aa6.3□□□□□ -1.4
TNFAIP3-202ENST00000420009 STOML3Q8TAV4 291 aa6.3□□□□□ -1.4
TNFAIP3-202ENST00000420009 LINC00474Q9P2X8 69 aa6.3□□□□□ -1.4
TNFAIP3-202ENST00000420009 FXYD6-FXYD2A0A087WZ82 144 aa6.29□□□□□ -1.4
TNFAIP3-202ENST00000420009 BORCS7-ASMTA0A0B4J1R7 106 aa6.29□□□□□ -1.4
TNFAIP3-202ENST00000420009 MGPP08493 103 aa6.29□□□□□ -1.4
TNFAIP3-202ENST00000420009 SSTP61278 116 aa6.29□□□□□ -1.4
TNFAIP3-202ENST00000420009 AKR1C8PQ5T2L2 129 aa6.29□□□□□ -1.4
TNFAIP3-202ENST00000420009 CST9LP1Q5W188 147 aa6.29□□□□□ -1.4
TNFAIP3-202ENST00000420009 Q6ZRP5 223 aa6.29□□□□□ -1.4
TNFAIP3-202ENST00000420009 FAT4Q6V0I7 4981 aa6.29□□□□□ -1.4
TNFAIP3-202ENST00000420009 S100A9P06702 114 aaKnown RBP6.28□□□□□ -1.4
TNFAIP3-202ENST00000420009 IFITM2Q01629 132 aa6.28□□□□□ -1.4
TNFAIP3-202ENST00000420009 RASL11AQ6T310 242 aa6.28□□□□□ -1.4
TNFAIP3-202ENST00000420009 UBE2L6O14933 153 aa6.27□□□□□ -1.41
TNFAIP3-202ENST00000420009 ARPC5O15511 151 aa6.27□□□□□ -1.41
TNFAIP3-202ENST00000420009 PAGE4O60829 102 aa6.27□□□□□ -1.41
TNFAIP3-202ENST00000420009 IGLC6P0CF74 106 aa6.27□□□□□ -1.41
TNFAIP3-202ENST00000420009 AMTP48728 403 aa6.27□□□□□ -1.41
TNFAIP3-202ENST00000420009 BAGE2Q86Y30 109 aa6.27□□□□□ -1.41
TNFAIP3-202ENST00000420009 CHCHD10Q8WYQ3 142 aaPredicted RBP6.27□□□□□ -1.41
TNFAIP3-202ENST00000420009 PKIGQ9Y2B9 76 aa6.27□□□□□ -1.41
TNFAIP3-202ENST00000420009 IGKV3OR2-268A0A0C4DH90 116 aa6.26□□□□□ -1.41
TNFAIP3-202ENST00000420009 FOXI1Q12951 378 aa6.26□□□□□ -1.41
TNFAIP3-202ENST00000420009 COTL1Q14019 142 aa6.26□□□□□ -1.41
TNFAIP3-202ENST00000420009 ZNF345Q14585 488 aa6.26□□□□□ -1.41
TNFAIP3-202ENST00000420009 TMUB2Q71RG4 321 aa6.26□□□□□ -1.41
TNFAIP3-202ENST00000420009 KCNRGQ8N5I3 272 aa6.26□□□□□ -1.41
TNFAIP3-202ENST00000420009 NIT2Q9NQR4 276 aa6.26□□□□□ -1.41
TNFAIP3-202ENST00000420009 FAM231BA6NCW3 169 aa6.25□□□□□ -1.41
TNFAIP3-202ENST00000420009 FER1L6-AS1Q8NA97 138 aa6.25□□□□□ -1.41
TNFAIP3-202ENST00000420009 BCL2L11O43521 198 aa6.24□□□□□ -1.41
TNFAIP3-202ENST00000420009 EIF4EBP3O60516 100 aaPredicted RBP6.24□□□□□ -1.41
TNFAIP3-202ENST00000420009 CACNG7P62955 275 aa6.24□□□□□ -1.41
TNFAIP3-202ENST00000420009 CARD19Q96LW7 228 aa6.24□□□□□ -1.41
TNFAIP3-202ENST00000420009 TPPP3Q9BW30 176 aa6.24□□□□□ -1.41
TNFAIP3-202ENST00000420009 NTF3P20783 257 aa6.23□□□□□ -1.41
TNFAIP3-202ENST00000420009 ZNF664Q8N3J9 261 aa6.23□□□□□ -1.41
TNFAIP3-202ENST00000420009 LINC00526Q96FQ7 95 aa6.23□□□□□ -1.41
TNFAIP3-202ENST00000420009 CYTL1Q9NRR1 136 aa6.23□□□□□ -1.41
TNFAIP3-202ENST00000420009 PSORS1C2Q9UIG4 136 aa6.23□□□□□ -1.41
TNFAIP3-202ENST00000420009 IGHV1-58A0A0C4DH39 117 aa6.22□□□□□ -1.41
TNFAIP3-202ENST00000420009 TRGC1P0CF51 173 aa6.22□□□□□ -1.41
TNFAIP3-202ENST00000420009 RPL35P42766 123 aaKnown RBP6.22□□□□□ -1.41
TNFAIP3-202ENST00000420009 PTTG1IPP53801 180 aa6.22□□□□□ -1.41
TNFAIP3-202ENST00000420009 RPS20P60866 119 aaKnown RBP6.22□□□□□ -1.41
TNFAIP3-202ENST00000420009 OR2D3Q8NGH3 330 aa6.22□□□□□ -1.41
TNFAIP3-202ENST00000420009 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.21□□□□□ -1.42
TNFAIP3-202ENST00000420009 KANTRA0A1W2PQU2 76 aa6.21□□□□□ -1.42
TNFAIP3-202ENST00000420009 IGKV2-29A2NJV5 120 aaPredicted RBP6.21□□□□□ -1.42
TNFAIP3-202ENST00000420009 C19orf71A6NCJ1 209 aa6.21□□□□□ -1.42
TNFAIP3-202ENST00000420009 F2Z2F3 143 aa6.21□□□□□ -1.42
TNFAIP3-202ENST00000420009 H7C423 109 aa6.21□□□□□ -1.42
TNFAIP3-202ENST00000420009 NCR2O95944 276 aa6.21□□□□□ -1.42
TNFAIP3-202ENST00000420009 FGF6P10767 208 aa6.21□□□□□ -1.42
TNFAIP3-202ENST00000420009 XCL1P47992 114 aa6.21□□□□□ -1.42
TNFAIP3-202ENST00000420009 AMMECR1LQ6DCA0 310 aa6.21□□□□□ -1.42
TNFAIP3-202ENST00000420009 SLC51BQ86UW2 128 aa6.21□□□□□ -1.42
TNFAIP3-202ENST00000420009 OR5A1Q8NGJ0 315 aa6.21□□□□□ -1.42
TNFAIP3-202ENST00000420009 MBD3L1Q8WWY6 194 aa6.21□□□□□ -1.42
TNFAIP3-202ENST00000420009 C11orf52Q96A22 123 aa6.21□□□□□ -1.42
TNFAIP3-202ENST00000420009 A0A1W2PNN7 141 aa6.2□□□□□ -1.42
TNFAIP3-202ENST00000420009 CCL25O15444 150 aa6.2□□□□□ -1.42
TNFAIP3-202ENST00000420009 ZNF25P17030 456 aaPredicted RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms