RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 TIRAPP58753 221 aa9.95□□□□□ -0.82
SHMT1P1-201ENST00000419974 COTL1Q14019 142 aa9.95□□□□□ -0.82
SHMT1P1-201ENST00000419974 PDZD11Q5EBL8 140 aa9.95□□□□□ -0.82
SHMT1P1-201ENST00000419974 TRAV10A0A0B4J240 114 aa9.94□□□□□ -0.82
SHMT1P1-201ENST00000419974 C3orf84H3BNL1 204 aa9.94□□□□□ -0.82
SHMT1P1-201ENST00000419974 GYPEP15421 78 aa9.94□□□□□ -0.82
SHMT1P1-201ENST00000419974 NANOS2P60321 138 aaKnown RBP9.94□□□□□ -0.82
SHMT1P1-201ENST00000419974 MRPL23Q16540 153 aaKnown RBP9.94□□□□□ -0.82
SHMT1P1-201ENST00000419974 C20orf203Q8NBC4 194 aa9.94□□□□□ -0.82
SHMT1P1-201ENST00000419974 TOMM6Q96B49 74 aa9.94□□□□□ -0.82
SHMT1P1-201ENST00000419974 DEFB131BA0A096LNP1 70 aa9.93□□□□□ -0.82
SHMT1P1-201ENST00000419974 GAGE12JA6NER3 117 aa9.93□□□□□ -0.82
SHMT1P1-201ENST00000419974 H7C423 109 aa9.93□□□□□ -0.82
SHMT1P1-201ENST00000419974 GAGE1Q13065 139 aa9.93□□□□□ -0.82
SHMT1P1-201ENST00000419974 GAGE4Q13068 117 aa9.93□□□□□ -0.82
SHMT1P1-201ENST00000419974 GAGE5Q13069 117 aa9.93□□□□□ -0.82
SHMT1P1-201ENST00000419974 GAGE13Q4V321 117 aa9.93□□□□□ -0.82
SHMT1P1-201ENST00000419974 FAM19A2Q8N3H0 131 aa9.93□□□□□ -0.82
SHMT1P1-201ENST00000419974 HSPB8Q9UJY1 196 aa9.93□□□□□ -0.82
SHMT1P1-201ENST00000419974 LOC100131303A0A0U1RQF7 123 aa9.92□□□□□ -0.82
SHMT1P1-201ENST00000419974 LEPROTL1O95214 131 aa9.92□□□□□ -0.82
SHMT1P1-201ENST00000419974 NUDT3O95989 172 aa9.92□□□□□ -0.82
SHMT1P1-201ENST00000419974 FABP4P15090 132 aa9.92□□□□□ -0.82
SHMT1P1-201ENST00000419974 SPATA12Q7Z6I5 190 aa9.92□□□□□ -0.82
SHMT1P1-201ENST00000419974 ATP6V0E2Q8NHE4 81 aa9.92□□□□□ -0.82
SHMT1P1-201ENST00000419974 PYGO1Q9Y3Y4 419 aa9.92□□□□□ -0.82
SHMT1P1-201ENST00000419974 ICOSQ9Y6W8 199 aa9.92□□□□□ -0.82
SHMT1P1-201ENST00000419974 DNAH7Q8WXX0 4024 aa9.92□□□□□ -0.82
SHMT1P1-201ENST00000419974 C2orf66Q6UXQ4 117 aa9.91□□□□□ -0.82
SHMT1P1-201ENST00000419974 NTM-AS1Q6ZSK4 140 aa9.91□□□□□ -0.82
SHMT1P1-201ENST00000419974 NEGR1Q7Z3B1 354 aa9.91□□□□□ -0.82
SHMT1P1-201ENST00000419974 TIMM17AQ99595 171 aa9.91□□□□□ -0.82
SHMT1P1-201ENST00000419974 CHCHD7Q9BUK0 85 aa9.91□□□□□ -0.82
SHMT1P1-201ENST00000419974 TIMM21Q9BVV7 248 aa9.91□□□□□ -0.82
SHMT1P1-201ENST00000419974 CYSLTR1Q9Y271 337 aa9.91□□□□□ -0.82
SHMT1P1-201ENST00000419974 CSDC2Q9Y534 153 aaKnown RBP9.91□□□□□ -0.82
SHMT1P1-201ENST00000419974 DYNC2H1Q8NCM8 4307 aaKnown RBP9.91□□□□□ -0.82
SHMT1P1-201ENST00000419974 A0A096LPF7 62 aa9.9□□□□□ -0.82
SHMT1P1-201ENST00000419974 TRBV6-8A0A0A6YYG3 113 aa9.9□□□□□ -0.82
SHMT1P1-201ENST00000419974 IGIPA6NJ69 53 aa9.9□□□□□ -0.82
SHMT1P1-201ENST00000419974 ATP5LO75964 103 aa9.9□□□□□ -0.82
SHMT1P1-201ENST00000419974 ERASQ7Z444 233 aa9.9□□□□□ -0.82
SHMT1P1-201ENST00000419974 C15orf53Q8NAA6 179 aa9.9□□□□□ -0.82
SHMT1P1-201ENST00000419974 RYR3Q15413 4870 aa9.9□□□□□ -0.82
SHMT1P1-201ENST00000419974 BTF3P20290 206 aaKnown RBP9.89□□□□□ -0.83
SHMT1P1-201ENST00000419974 SMAGPQ0VAQ4 97 aa9.89□□□□□ -0.83
SHMT1P1-201ENST00000419974 PMCHL1Q16048 86 aa9.89□□□□□ -0.83
SHMT1P1-201ENST00000419974 MRPL52Q86TS9 123 aaKnown RBP9.89□□□□□ -0.83
SHMT1P1-201ENST00000419974 MUC7Q8TAX7 377 aa9.89□□□□□ -0.83
SHMT1P1-201ENST00000419974 TMEM141Q96I45 108 aa9.89□□□□□ -0.83
SHMT1P1-201ENST00000419974 TRBV25-1A0A075B6N4 114 aa9.88□□□□□ -0.83
SHMT1P1-201ENST00000419974 A0A0J9YY99 117 aa9.88□□□□□ -0.83
SHMT1P1-201ENST00000419974 PHLDA1Q8WV24 401 aaPredicted RBP9.88□□□□□ -0.83
SHMT1P1-201ENST00000419974 SPANXA1Q9NS26 97 aa9.88□□□□□ -0.83
SHMT1P1-201ENST00000419974 IGHV3-38A0A0C4DH36 116 aa9.87□□□□□ -0.83
SHMT1P1-201ENST00000419974 HTN3P15516 51 aa9.87□□□□□ -0.83
SHMT1P1-201ENST00000419974 IFI27L1Q96BM0 104 aa9.87□□□□□ -0.83
SHMT1P1-201ENST00000419974 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.86□□□□□ -0.83
SHMT1P1-201ENST00000419974 ZNF25P17030 456 aaPredicted RBP9.86□□□□□ -0.83
SHMT1P1-201ENST00000419974 AKR1D1P51857 326 aa9.86□□□□□ -0.83
SHMT1P1-201ENST00000419974 MRPS36P82909 103 aaKnown RBP9.86□□□□□ -0.83
SHMT1P1-201ENST00000419974 CASC10Q5T4H9 136 aa9.86□□□□□ -0.83
SHMT1P1-201ENST00000419974 OR10D4PQ8NGN7 298 aa9.86□□□□□ -0.83
SHMT1P1-201ENST00000419974 TMEM243Q9BU79 118 aa9.86□□□□□ -0.83
SHMT1P1-201ENST00000419974 MAP1LC3CQ9BXW4 147 aa9.86□□□□□ -0.83
SHMT1P1-201ENST00000419974 UBE2D4Q9Y2X8 147 aa9.86□□□□□ -0.83
SHMT1P1-201ENST00000419974 TRAV12-1A0A0B4J245 112 aa9.85□□□□□ -0.83
SHMT1P1-201ENST00000419974 C3orf79P0CE67 100 aa9.85□□□□□ -0.83
SHMT1P1-201ENST00000419974 TCTAP57738 103 aa9.85□□□□□ -0.83
SHMT1P1-201ENST00000419974 PKIAP61925 76 aa9.85□□□□□ -0.83
SHMT1P1-201ENST00000419974 PAPPA-AS1Q5QFB9 102 aa9.85□□□□□ -0.83
SHMT1P1-201ENST00000419974 LELP1Q5T871 98 aa9.85□□□□□ -0.83
SHMT1P1-201ENST00000419974 PET117Q6UWS5 81 aa9.85□□□□□ -0.83
SHMT1P1-201ENST00000419974 SCGB3A1Q96QR1 104 aa9.85□□□□□ -0.83
SHMT1P1-201ENST00000419974 A0A1B0GUV1 79 aa9.84□□□□□ -0.83
SHMT1P1-201ENST00000419974 SYS1-DBNDD2H3BUS1 97 aa9.84□□□□□ -0.83
SHMT1P1-201ENST00000419974 JOSD1Q15040 202 aaPredicted RBP9.84□□□□□ -0.83
SHMT1P1-201ENST00000419974 LYPD5Q6UWN5 251 aa9.84□□□□□ -0.83
SHMT1P1-201ENST00000419974 RPL39P62891 51 aaKnown RBP9.83□□□□□ -0.84
SHMT1P1-201ENST00000419974 CSMD3Q7Z407 3707 aa9.82□□□□□ -0.84
SHMT1P1-201ENST00000419974 LGALS9CQ6DKI2 356 aa9.82□□□□□ -0.84
SHMT1P1-201ENST00000419974 LINC00173Q6ZV60 143 aa9.82□□□□□ -0.84
SHMT1P1-201ENST00000419974 FAM104AQ969W3 186 aa9.82□□□□□ -0.84
SHMT1P1-201ENST00000419974 AMELXQ99217 191 aa9.82□□□□□ -0.84
SHMT1P1-201ENST00000419974 NUPR2A6NF83 97 aa9.82□□□□□ -0.84
SHMT1P1-201ENST00000419974 LINC01545Q5VT33 79 aa9.82□□□□□ -0.84
SHMT1P1-201ENST00000419974 CEMP1Q6PRD7 247 aaPredicted RBP9.82□□□□□ -0.84
SHMT1P1-201ENST00000419974 IGLV4-3A0A075B6K6 122 aa9.81□□□□□ -0.84
SHMT1P1-201ENST00000419974 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.81□□□□□ -0.84
SHMT1P1-201ENST00000419974 IGKV2-29A2NJV5 120 aaPredicted RBP9.81□□□□□ -0.84
SHMT1P1-201ENST00000419974 UBE2L6O14933 153 aa9.81□□□□□ -0.84
SHMT1P1-201ENST00000419974 FGF6P10767 208 aa9.81□□□□□ -0.84
SHMT1P1-201ENST00000419974 Q6ZN92 141 aa9.81□□□□□ -0.84
SHMT1P1-201ENST00000419974 Q8N976 141 aa9.81□□□□□ -0.84
SHMT1P1-201ENST00000419974 BAALCQ8WXS3 180 aa9.81□□□□□ -0.84
SHMT1P1-201ENST00000419974 A0A087WX48 190 aa9.8□□□□□ -0.84
SHMT1P1-201ENST00000419974 SMIM6P0DI80 62 aa9.8□□□□□ -0.84
SHMT1P1-201ENST00000419974 KRTDAPP60985 99 aa9.8□□□□□ -0.84
SHMT1P1-201ENST00000419974 PMVKQ15126 192 aa9.8□□□□□ -0.84
SHMT1P1-201ENST00000419974 PYY3Q5JQD4 70 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms