RNA–Protein interactions for RNA: ENST00000344951.8

CUL3-202, Transcript of cullin 3, humanhuman

TSL 2 BASIC

Gene CUL3, Length 6,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-202ENST00000344951 MRPL55Q7Z7F7 128 aaKnown RBP11.4□□□□□ -0.58
CUL3-202ENST00000344951 ZFAND2AQ8N6M9 145 aa11.4□□□□□ -0.58
CUL3-202ENST00000344951 SNURFQ9Y675 71 aa11.4□□□□□ -0.58
CUL3-202ENST00000344951 POM121L12Q8N7R1 296 aa11.4□□□□□ -0.59
CUL3-202ENST00000344951 IGHV1-58A0A0C4DH39 117 aa11.39□□□□□ -0.59
CUL3-202ENST00000344951 H3BQ85 93 aa11.39□□□□□ -0.59
CUL3-202ENST00000344951 TCL1BO95988 128 aa11.39□□□□□ -0.59
CUL3-202ENST00000344951 IGLV2-8P01709 118 aa11.39□□□□□ -0.59
CUL3-202ENST00000344951 UBE2D2P62837 147 aa11.39□□□□□ -0.59
CUL3-202ENST00000344951 SERP1Q9Y6X1 66 aa11.39□□□□□ -0.59
CUL3-202ENST00000344951 PRR15LQ9BU68 103 aa11.39□□□□□ -0.59
CUL3-202ENST00000344951 TRBV10-1A0A0K0K1A3 114 aa11.39□□□□□ -0.59
CUL3-202ENST00000344951 OBSL1O75147 1896 aa11.39□□□□□ -0.59
CUL3-202ENST00000344951 TANC1Q9C0D5 1861 aa11.39□□□□□ -0.59
CUL3-202ENST00000344951 NDUFA11Q86Y39 141 aa11.38□□□□□ -0.59
CUL3-202ENST00000344951 PIK3CD-AS1Q5SR53 167 aa11.38□□□□□ -0.59
CUL3-202ENST00000344951 ZFAND3Q9H8U3 227 aa11.38□□□□□ -0.59
CUL3-202ENST00000344951 A0A1B0GXF2 115 aa11.38□□□□□ -0.59
CUL3-202ENST00000344951 MED14OSP0DP75 135 aa11.38□□□□□ -0.59
CUL3-202ENST00000344951 CNOT1A5YKK6 2376 aaKnown RBP11.37□□□□□ -0.59
CUL3-202ENST00000344951 Q6ZPA2 131 aa11.37□□□□□ -0.59
CUL3-202ENST00000344951 FAM30AQ9NZY2 134 aa11.37□□□□□ -0.59
CUL3-202ENST00000344951 LINC01548A6NM66 108 aa11.37□□□□□ -0.59
CUL3-202ENST00000344951 Q8N7P7 452 aa11.37□□□□□ -0.59
CUL3-202ENST00000344951 LINC00467Q9BRT7 94 aa11.37□□□□□ -0.59
CUL3-202ENST00000344951 NOTCH4Q99466 2003 aa11.36□□□□□ -0.59
CUL3-202ENST00000344951 IGF1P05019 195 aa11.36□□□□□ -0.59
CUL3-202ENST00000344951 ZNF80P51504 273 aaPredicted RBP11.36□□□□□ -0.59
CUL3-202ENST00000344951 C22orf34Q6ZV56 151 aa11.36□□□□□ -0.59
CUL3-202ENST00000344951 ZNF295-AS1Q8N0V1 137 aa11.36□□□□□ -0.59
CUL3-202ENST00000344951 TNCP24821 2201 aa11.36□□□□□ -0.59
CUL3-202ENST00000344951 TNRC6AQ8NDV7 1962 aaKnown RBP11.36□□□□□ -0.59
CUL3-202ENST00000344951 MT-ATP8P03928 68 aa11.35□□□□□ -0.59
CUL3-202ENST00000344951 UFSP1Q6NVU6 142 aa11.35□□□□□ -0.59
CUL3-202ENST00000344951 ARHGAP21Q5T5U3 1957 aa11.35□□□□□ -0.59
CUL3-202ENST00000344951 A6NED7 52 aa11.35□□□□□ -0.59
CUL3-202ENST00000344951 P0C879 139 aa11.35□□□□□ -0.59
CUL3-202ENST00000344951 PROK1P58294 105 aa11.35□□□□□ -0.59
CUL3-202ENST00000344951 NUP210Q8TEM1 1887 aaPredicted RBP11.34□□□□□ -0.59
CUL3-202ENST00000344951 ACACAQ13085 2346 aa11.34□□□□□ -0.59
CUL3-202ENST00000344951 PIP4P1Q86T03 277 aa11.34□□□□□ -0.59
CUL3-202ENST00000344951 LY6LH3BQJ8 138 aa11.34□□□□□ -0.59
CUL3-202ENST00000344951 Q6ZVQ6 151 aa11.33□□□□□ -0.59
CUL3-202ENST00000344951 BRWD1-AS2P59051 145 aa11.33□□□□□ -0.6
CUL3-202ENST00000344951 H3BT86 120 aa11.33□□□□□ -0.6
CUL3-202ENST00000344951 YPEL4Q96NS1 127 aa11.32□□□□□ -0.6
CUL3-202ENST00000344951 MSMPQ1L6U9 139 aa11.32□□□□□ -0.6
CUL3-202ENST00000344951 MIAQ16674 131 aa11.32□□□□□ -0.6
CUL3-202ENST00000344951 IGLV1-47P01700 117 aa11.32□□□□□ -0.6
CUL3-202ENST00000344951 A0A0J9YX75 114 aa11.32□□□□□ -0.6
CUL3-202ENST00000344951 IGFL2Q6UWQ7 119 aa11.31□□□□□ -0.6
CUL3-202ENST00000344951 CCKP06307 115 aa11.31□□□□□ -0.6
CUL3-202ENST00000344951 IGLC6P0CF74 106 aa11.31□□□□□ -0.6
CUL3-202ENST00000344951 Q8N976 141 aa11.3□□□□□ -0.6
CUL3-202ENST00000344951 CIRBP-AS1Q8TBR5 109 aa11.3□□□□□ -0.6
CUL3-202ENST00000344951 A0A0J9YXY3 114 aa11.3□□□□□ -0.6
CUL3-202ENST00000344951 C19orf84I3L1E1 186 aa11.3□□□□□ -0.6
CUL3-202ENST00000344951 CRIP3Q6Q6R5 217 aa11.3□□□□□ -0.6
CUL3-202ENST00000344951 SPANXB1Q9NS25 103 aaPredicted RBP11.3□□□□□ -0.6
CUL3-202ENST00000344951 FAM236DA0A1B0GTK5 79 aa11.3□□□□□ -0.6
CUL3-202ENST00000344951 FAM236CP0DP71 79 aa11.3□□□□□ -0.6
CUL3-202ENST00000344951 C1orf229Q6ZS94 237 aaPredicted RBP11.3□□□□□ -0.6
CUL3-202ENST00000344951 SPINK1P00995 79 aa11.3□□□□□ -0.6
CUL3-202ENST00000344951 C20orf203Q8NBC4 194 aa11.3□□□□□ -0.6
CUL3-202ENST00000344951 A8MZ25 164 aa11.29□□□□□ -0.6
CUL3-202ENST00000344951 WISP2O76076 250 aa11.29□□□□□ -0.6
CUL3-202ENST00000344951 WFDC10AQ9H1F0 79 aa11.29□□□□□ -0.6
CUL3-202ENST00000344951 C10orf99Q6UWK7 81 aa11.29□□□□□ -0.6
CUL3-202ENST00000344951 BBC3Q96PG8 261 aaPredicted RBP11.29□□□□□ -0.6
CUL3-202ENST00000344951 PRM2P04554 102 aa11.29□□□□□ -0.6
CUL3-202ENST00000344951 NANOS2P60321 138 aaKnown RBP11.29□□□□□ -0.6
CUL3-202ENST00000344951 KIF26AQ9ULI4 1882 aaPredicted RBP11.28□□□□□ -0.6
CUL3-202ENST00000344951 PLAC8L1A1L4L8 177 aa11.28□□□□□ -0.6
CUL3-202ENST00000344951 LOC100131303A0A0U1RQF7 123 aa11.28□□□□□ -0.6
CUL3-202ENST00000344951 K7EMT4 169 aa11.28□□□□□ -0.6
CUL3-202ENST00000344951 INSL3P51460 131 aa11.28□□□□□ -0.6
CUL3-202ENST00000344951 SERP2Q8N6R1 65 aa11.27□□□□□ -0.6
CUL3-202ENST00000344951 A6NDX4 124 aa11.27□□□□□ -0.61
CUL3-202ENST00000344951 C20orf173Q96LM9 149 aa11.27□□□□□ -0.61
CUL3-202ENST00000344951 CLUHP3Q96NS8 147 aa11.27□□□□□ -0.61
CUL3-202ENST00000344951 MAPKAPK5-AS1Q8N8E1 139 aa11.26□□□□□ -0.61
CUL3-202ENST00000344951 MBD6Q96DN6 1003 aa11.26□□□□□ -0.61
CUL3-202ENST00000344951 FAM240AA0A1B0GVK7 77 aa11.26□□□□□ -0.61
CUL3-202ENST00000344951 CDKN2A-AS1Q9UH64 79 aa11.26□□□□□ -0.61
CUL3-202ENST00000344951 NDUFC2-KCTD14E9PQ53 114 aa11.25□□□□□ -0.61
CUL3-202ENST00000344951 SPTAN1Q13813 2472 aaKnown RBP11.25□□□□□ -0.61
CUL3-202ENST00000344951 LY6G6DO95868 133 aa11.25□□□□□ -0.61
CUL3-202ENST00000344951 IGLV2-11P01706 119 aa11.25□□□□□ -0.61
CUL3-202ENST00000344951 SYCNQ0VAF6 134 aa11.25□□□□□ -0.61
CUL3-202ENST00000344951 C6orf99Q4VX62 202 aa11.25□□□□□ -0.61
CUL3-202ENST00000344951 NEXN-AS1Q8NBZ9 246 aa11.25□□□□□ -0.61
CUL3-202ENST00000344951 SHANK1Q9Y566 2161 aa11.25□□□□□ -0.61
CUL3-202ENST00000344951 LINC00643Q86TS7 51 aa11.25□□□□□ -0.61
CUL3-202ENST00000344951 Q8N9L7 120 aa11.25□□□□□ -0.61
CUL3-202ENST00000344951 PLA2G1BP04054 148 aaKnown RBP11.24□□□□□ -0.61
CUL3-202ENST00000344951 CCDC140Q96MF4 163 aa11.24□□□□□ -0.61
CUL3-202ENST00000344951 RBX1P62877 108 aa11.24□□□□□ -0.61
CUL3-202ENST00000344951 C18orf65Q6ZTR6 163 aa11.23□□□□□ -0.61
CUL3-202ENST00000344951 A0A1W2PNU3 283 aaPredicted RBP11.23□□□□□ -0.61
CUL3-202ENST00000344951 PRYO14603 147 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms