RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 IGHV4-4A0A075B6R2 117 aa8.83□□□□□ -1
SHMT2-201ENST00000328923 M0R1W7 72 aa8.83□□□□□ -1
SHMT2-201ENST00000328923 LITAFQ99732 161 aa8.83□□□□□ -1
SHMT2-201ENST00000328923 SERP1Q9Y6X1 66 aa8.83□□□□□ -1
SHMT2-201ENST00000328923 PTPN13Q12923 2485 aa8.83□□□□□ -1
SHMT2-201ENST00000328923 ADAMTSL4-AS1Q5T5F5 129 aa8.82□□□□□ -1
SHMT2-201ENST00000328923 NDUFC2-KCTD14E9PQ53 114 aa8.82□□□□□ -1
SHMT2-201ENST00000328923 NDUFC2O95298 119 aa8.82□□□□□ -1
SHMT2-201ENST00000328923 ZNF876PQ49A33 203 aa8.82□□□□□ -1
SHMT2-201ENST00000328923 S4R3C0 116 aa8.82□□□□□ -1
SHMT2-201ENST00000328923 IGLV11-55A0A075B6I3 123 aa8.81□□□□□ -1
SHMT2-201ENST00000328923 PRAC2D3DTV9 90 aa8.81□□□□□ -1
SHMT2-201ENST00000328923 NBR2O15453 112 aa8.81□□□□□ -1
SHMT2-201ENST00000328923 DAND5Q8N907 189 aa8.81□□□□□ -1
SHMT2-201ENST00000328923 C22orf24Q9Y442 160 aa8.81□□□□□ -1
SHMT2-201ENST00000328923 F8W735 103 aaPredicted RBP8.8□□□□□ -1
SHMT2-201ENST00000328923 BUB3O43684 328 aa8.8□□□□□ -1
SHMT2-201ENST00000328923 MGPP08493 103 aa8.8□□□□□ -1
SHMT2-201ENST00000328923 SDHAF1A6NFY7 115 aa8.8□□□□□ -1
SHMT2-201ENST00000328923 TMEM61Q8N0U2 210 aa8.8□□□□□ -1
SHMT2-201ENST00000328923 RNF182Q8N6D2 247 aa8.8□□□□□ -1
SHMT2-201ENST00000328923 SMAD5-AS1Q9Y6J3 95 aa8.8□□□□□ -1
SHMT2-201ENST00000328923 FLNCQ14315 2725 aa8.8□□□□□ -1
SHMT2-201ENST00000328923 M0R381 172 aa8.79□□□□□ -1
SHMT2-201ENST00000328923 BSPH1Q075Z2 132 aa8.79□□□□□ -1
SHMT2-201ENST00000328923 CCL17Q92583 94 aa8.79□□□□□ -1
SHMT2-201ENST00000328923 UBR5O95071 2799 aaPredicted RBP8.79□□□□□ -1
SHMT2-201ENST00000328923 BAALC-AS2P0C853 105 aa8.79□□□□□ -1
SHMT2-201ENST00000328923 C20orf197Q8N268 126 aa8.79□□□□□ -1
SHMT2-201ENST00000328923 RNASE6Q93091 150 aaKnown RBP8.79□□□□□ -1
SHMT2-201ENST00000328923 FANCD2OSQ96PS1 177 aa8.79□□□□□ -1
SHMT2-201ENST00000328923 OPRPNQ99935 248 aaPredicted RBP8.79□□□□□ -1
SHMT2-201ENST00000328923 IGHV1-69DA0A0B4J2H0 117 aa8.78□□□□□ -1
SHMT2-201ENST00000328923 A0A0J9YX75 114 aa8.78□□□□□ -1
SHMT2-201ENST00000328923 NPBQ8NG41 125 aa8.78□□□□□ -1
SHMT2-201ENST00000328923 LINC00474Q9P2X8 69 aa8.78□□□□□ -1
SHMT2-201ENST00000328923 NXPH4O95158 308 aa8.78□□□□□ -1
SHMT2-201ENST00000328923 DOPEY2Q9Y3R5 2298 aa8.78□□□□□ -1
SHMT2-201ENST00000328923 ZFHX3Q15911 3703 aa8.77□□□□□ -1.01
SHMT2-201ENST00000328923 SMIM26A0A096LP01 95 aa8.77□□□□□ -1.01
SHMT2-201ENST00000328923 Q6JHZ5 121 aa8.77□□□□□ -1.01
SHMT2-201ENST00000328923 TMEM141Q96I45 108 aa8.77□□□□□ -1.01
SHMT2-201ENST00000328923 VPS13CQ709C8 3753 aa8.76□□□□□ -1.01
SHMT2-201ENST00000328923 CCL21O00585 134 aa8.76□□□□□ -1.01
SHMT2-201ENST00000328923 HILS1P60008 231 aa8.76□□□□□ -1.01
SHMT2-201ENST00000328923 SS18Q15532 418 aa8.76□□□□□ -1.01
SHMT2-201ENST00000328923 MRPL53Q96EL3 112 aaKnown RBP8.76□□□□□ -1.01
SHMT2-201ENST00000328923 LRRK2Q5S007 2527 aa8.76□□□□□ -1.01
SHMT2-201ENST00000328923 A0A0U1RRA0 63 aa8.76□□□□□ -1.01
SHMT2-201ENST00000328923 GHRHP01286 108 aa8.76□□□□□ -1.01
SHMT2-201ENST00000328923 NDPQ00604 133 aa8.76□□□□□ -1.01
SHMT2-201ENST00000328923 GPHB5Q86YW7 130 aa8.76□□□□□ -1.01
SHMT2-201ENST00000328923 INAFM2P0DMQ5 153 aa8.75□□□□□ -1.01
SHMT2-201ENST00000328923 MIAQ16674 131 aa8.75□□□□□ -1.01
SHMT2-201ENST00000328923 BEAN1Q3B7T3 259 aa8.75□□□□□ -1.01
SHMT2-201ENST00000328923 LYPD5Q6UWN5 251 aa8.75□□□□□ -1.01
SHMT2-201ENST00000328923 FAM19A1Q7Z5A9 133 aa8.75□□□□□ -1.01
SHMT2-201ENST00000328923 TIMM17AQ99595 171 aa8.75□□□□□ -1.01
SHMT2-201ENST00000328923 CYSRT1A8MQ03 144 aa8.75□□□□□ -1.01
SHMT2-201ENST00000328923 XCL1P47992 114 aa8.75□□□□□ -1.01
SHMT2-201ENST00000328923 C20orf173Q96LM9 149 aa8.75□□□□□ -1.01
SHMT2-201ENST00000328923 LINC00846Q9NV44 126 aa8.75□□□□□ -1.01
SHMT2-201ENST00000328923 XCL2Q9UBD3 114 aa8.75□□□□□ -1.01
SHMT2-201ENST00000328923 RBMY1BA6NDE4 496 aaKnown RBP8.74□□□□□ -1.01
SHMT2-201ENST00000328923 RBMY1EA6NEQ0 496 aaKnown RBP8.74□□□□□ -1.01
SHMT2-201ENST00000328923 KNCNA6PVL3 124 aa8.74□□□□□ -1.01
SHMT2-201ENST00000328923 H7BZZ5 65 aa8.74□□□□□ -1.01
SHMT2-201ENST00000328923 CTSGP08311 255 aa8.74□□□□□ -1.01
SHMT2-201ENST00000328923 RBMY1DP0C7P1 496 aaKnown RBP8.74□□□□□ -1.01
SHMT2-201ENST00000328923 RBMY1A1P0DJD3 496 aaKnown RBP8.74□□□□□ -1.01
SHMT2-201ENST00000328923 RBMY1CP0DJD4 496 aa8.74□□□□□ -1.01
SHMT2-201ENST00000328923 IGHV3-30-3P0DP02 117 aa8.74□□□□□ -1.01
SHMT2-201ENST00000328923 RBMY1FQ15415 496 aaKnown RBP8.74□□□□□ -1.01
SHMT2-201ENST00000328923 UBE2D4Q9Y2X8 147 aa8.74□□□□□ -1.01
SHMT2-201ENST00000328923 A0A0J9YXV3 536 aa8.74□□□□□ -1.01
SHMT2-201ENST00000328923 COX7A2LO14548 114 aa8.74□□□□□ -1.01
SHMT2-201ENST00000328923 DNAL4O96015 105 aa8.74□□□□□ -1.01
SHMT2-201ENST00000328923 COX7A1P24310 79 aa8.74□□□□□ -1.01
SHMT2-201ENST00000328923 Q8N2B8 174 aa8.74□□□□□ -1.01
SHMT2-201ENST00000328923 IGHV3OR16-8A0A075B7F1 116 aa8.73□□□□□ -1.01
SHMT2-201ENST00000328923 PPP1R17O96001 155 aa8.73□□□□□ -1.01
SHMT2-201ENST00000328923 IGHG2P01859 326 aa8.73□□□□□ -1.01
SHMT2-201ENST00000328923 C6orf226Q5I0X4 101 aa8.73□□□□□ -1.01
SHMT2-201ENST00000328923 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.73□□□□□ -1.01
SHMT2-201ENST00000328923 C9orf47Q6ZRZ4 202 aa8.72□□□□□ -1.01
SHMT2-201ENST00000328923 RETNQ9HD89 108 aa8.72□□□□□ -1.01
SHMT2-201ENST00000328923 TRAV23DV6A0A075B6W5 121 aa8.72□□□□□ -1.01
SHMT2-201ENST00000328923 RPL28P46779 137 aaKnown RBP8.72□□□□□ -1.01
SHMT2-201ENST00000328923 C9orf129Q5T035 196 aaKnown RBP8.72□□□□□ -1.01
SHMT2-201ENST00000328923 FAM218AQ96MZ4 157 aa8.72□□□□□ -1.01
SHMT2-201ENST00000328923 LENEPQ9Y5L5 61 aa8.72□□□□□ -1.01
SHMT2-201ENST00000328923 E7EQL1 145 aa8.71□□□□□ -1.02
SHMT2-201ENST00000328923 WFDC9Q8NEX5 89 aa8.71□□□□□ -1.02
SHMT2-201ENST00000328923 Q9HAA7 133 aa8.71□□□□□ -1.02
SHMT2-201ENST00000328923 C14orf132Q9NPU4 83 aa8.71□□□□□ -1.02
SHMT2-201ENST00000328923 DPM3Q9P2X0 92 aa8.71□□□□□ -1.02
SHMT2-201ENST00000328923 A8MZ25 164 aa8.71□□□□□ -1.02
SHMT2-201ENST00000328923 TRBV12-3P01733 135 aa8.71□□□□□ -1.02
SHMT2-201ENST00000328923 ZFAND3Q9H8U3 227 aa8.71□□□□□ -1.02
SHMT2-201ENST00000328923 ABCA4P78363 2273 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms