RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 K7EQD1 137 aa6.35□□□□□ -1.39
SCARB2-225ENST00000640900 GAS8-AS1O95177 125 aa6.35□□□□□ -1.39
SCARB2-225ENST00000640900 SMIM17P0DL12 118 aa6.35□□□□□ -1.39
SCARB2-225ENST00000640900 RHOHQ15669 191 aa6.35□□□□□ -1.39
SCARB2-225ENST00000640900 FAM74A4Q5TZK3 123 aa6.35□□□□□ -1.39
SCARB2-225ENST00000640900 CEMP1Q6PRD7 247 aaPredicted RBP6.35□□□□□ -1.39
SCARB2-225ENST00000640900 SACSQ9NZJ4 4579 aa6.34□□□□□ -1.39
SCARB2-225ENST00000640900 ALMS1Q8TCU4 4167 aa6.34□□□□□ -1.39
SCARB2-225ENST00000640900 TRAV26-1A0A087WT03 109 aa6.34□□□□□ -1.39
SCARB2-225ENST00000640900 PRSS47A8MTI9 375 aa6.34□□□□□ -1.39
SCARB2-225ENST00000640900 F5H768 121 aa6.34□□□□□ -1.39
SCARB2-225ENST00000640900 PPBPP02775 128 aa6.34□□□□□ -1.39
SCARB2-225ENST00000640900 P0DMU3 169 aa6.34□□□□□ -1.39
SCARB2-225ENST00000640900 FAM231AP0DMU4 169 aa6.34□□□□□ -1.39
SCARB2-225ENST00000640900 FAM231CP0DMU5 169 aa6.34□□□□□ -1.39
SCARB2-225ENST00000640900 RAB5AP20339 215 aa6.34□□□□□ -1.39
SCARB2-225ENST00000640900 RPS10P46783 165 aaKnown RBP6.34□□□□□ -1.39
SCARB2-225ENST00000640900 RPL32P62910 135 aaKnown RBP6.34□□□□□ -1.39
SCARB2-225ENST00000640900 NEXN-AS1Q8NBZ9 246 aa6.34□□□□□ -1.39
SCARB2-225ENST00000640900 MUC7Q8TAX7 377 aa6.34□□□□□ -1.39
SCARB2-225ENST00000640900 TRAV26-2A0A0B4J265 109 aa6.33□□□□□ -1.4
SCARB2-225ENST00000640900 NUPR2A6NF83 97 aa6.33□□□□□ -1.4
SCARB2-225ENST00000640900 H7C1H1 209 aa6.33□□□□□ -1.4
SCARB2-225ENST00000640900 PAX4O43316 350 aa6.33□□□□□ -1.4
SCARB2-225ENST00000640900 POLR2KP53803 58 aaKnown RBP6.33□□□□□ -1.4
SCARB2-225ENST00000640900 ZNF56Q15929 161 aa6.33□□□□□ -1.4
SCARB2-225ENST00000640900 CDPF1Q6NVV7 123 aa6.33□□□□□ -1.4
SCARB2-225ENST00000640900 DNAJC30Q96LL9 226 aa6.33□□□□□ -1.4
SCARB2-225ENST00000640900 NIT2Q9NQR4 276 aa6.33□□□□□ -1.4
SCARB2-225ENST00000640900 LAMTOR2Q9Y2Q5 125 aa6.33□□□□□ -1.4
SCARB2-225ENST00000640900 LYSTQ99698 3801 aa6.33□□□□□ -1.4
SCARB2-225ENST00000640900 TRBV7-3A0A075B6L6 115 aa6.32□□□□□ -1.4
SCARB2-225ENST00000640900 A0A096LPF7 62 aa6.32□□□□□ -1.4
SCARB2-225ENST00000640900 LOC100131303A0A0U1RQF7 123 aa6.32□□□□□ -1.4
SCARB2-225ENST00000640900 D6R8Y8 96 aa6.32□□□□□ -1.4
SCARB2-225ENST00000640900 F5H697 171 aa6.32□□□□□ -1.4
SCARB2-225ENST00000640900 PPP1R17O96001 155 aa6.32□□□□□ -1.4
SCARB2-225ENST00000640900 APCSP02743 223 aa6.32□□□□□ -1.4
SCARB2-225ENST00000640900 MGPP08493 103 aa6.32□□□□□ -1.4
SCARB2-225ENST00000640900 HTN3P15516 51 aa6.32□□□□□ -1.4
SCARB2-225ENST00000640900 TCTAP57738 103 aa6.32□□□□□ -1.4
SCARB2-225ENST00000640900 TIRAPP58753 221 aa6.32□□□□□ -1.4
SCARB2-225ENST00000640900 UBE2D3P61077 147 aa6.32□□□□□ -1.4
SCARB2-225ENST00000640900 UBE2D2P62837 147 aa6.32□□□□□ -1.4
SCARB2-225ENST00000640900 ORMDL3Q8N138 153 aa6.32□□□□□ -1.4
SCARB2-225ENST00000640900 C15orf53Q8NAA6 179 aa6.32□□□□□ -1.4
SCARB2-225ENST00000640900 PRADC1Q9BSG0 188 aa6.32□□□□□ -1.4
SCARB2-225ENST00000640900 APLNQ9ULZ1 77 aa6.32□□□□□ -1.4
SCARB2-225ENST00000640900 IGLV2-18A0A075B6J9 118 aa6.31□□□□□ -1.4
SCARB2-225ENST00000640900 TRBV27A0A0K0K1C4 114 aa6.31□□□□□ -1.4
SCARB2-225ENST00000640900 SMKR1H3BMG3 65 aa6.31□□□□□ -1.4
SCARB2-225ENST00000640900 NPYP01303 97 aa6.31□□□□□ -1.4
SCARB2-225ENST00000640900 GYPEP15421 78 aa6.31□□□□□ -1.4
SCARB2-225ENST00000640900 CKS2P33552 79 aa6.31□□□□□ -1.4
SCARB2-225ENST00000640900 SH2D6Q7Z4S9 175 aa6.31□□□□□ -1.4
SCARB2-225ENST00000640900 RPL39LQ96EH5 51 aaKnown RBP6.31□□□□□ -1.4
SCARB2-225ENST00000640900 C20orf78Q9BR46 151 aa6.31□□□□□ -1.4
SCARB2-225ENST00000640900 ALKBH7Q9BT30 221 aaPredicted RBP6.31□□□□□ -1.4
SCARB2-225ENST00000640900 TRAPPC1Q9Y5R8 145 aa6.31□□□□□ -1.4
SCARB2-225ENST00000640900 A0A0J9YY99 117 aa6.3□□□□□ -1.4
SCARB2-225ENST00000640900 C3orf84H3BNL1 204 aa6.3□□□□□ -1.4
SCARB2-225ENST00000640900 TNFRSF6BO95407 300 aa6.3□□□□□ -1.4
SCARB2-225ENST00000640900 NCR2O95944 276 aa6.3□□□□□ -1.4
SCARB2-225ENST00000640900 FABP9Q0Z7S8 132 aa6.3□□□□□ -1.4
SCARB2-225ENST00000640900 MRPL23Q16540 153 aaKnown RBP6.3□□□□□ -1.4
SCARB2-225ENST00000640900 TMEM70Q9BUB7 260 aa6.3□□□□□ -1.4
SCARB2-225ENST00000640900 ICOSQ9Y6W8 199 aa6.3□□□□□ -1.4
SCARB2-225ENST00000640900 SDHAF1A6NFY7 115 aa6.29□□□□□ -1.4
SCARB2-225ENST00000640900 LINC01546A6NGU7 62 aa6.29□□□□□ -1.4
SCARB2-225ENST00000640900 TRGC2P03986 189 aa6.29□□□□□ -1.4
SCARB2-225ENST00000640900 SUMO2P61956 95 aaKnown RBP6.29□□□□□ -1.4
SCARB2-225ENST00000640900 RPL36AP83881 106 aaKnown RBP6.29□□□□□ -1.4
SCARB2-225ENST00000640900 KIAA1644Q3SXP7 199 aa6.29□□□□□ -1.4
SCARB2-225ENST00000640900 OR10J3Q5JRS4 329 aa6.29□□□□□ -1.4
SCARB2-225ENST00000640900 CASC10Q5T4H9 136 aa6.29□□□□□ -1.4
SCARB2-225ENST00000640900 DAZ4Q86SG3 579 aaKnown RBP6.29□□□□□ -1.4
SCARB2-225ENST00000640900 ZNRF2Q8NHG8 242 aa6.29□□□□□ -1.4
SCARB2-225ENST00000640900 RPL36ALQ969Q0 106 aaKnown RBP6.29□□□□□ -1.4
SCARB2-225ENST00000640900 PRELID3AQ96N28 172 aa6.29□□□□□ -1.4
SCARB2-225ENST00000640900 DAZ3Q9NR90 486 aaKnown RBP6.29□□□□□ -1.4
SCARB2-225ENST00000640900 KLK5Q9Y337 293 aaPredicted RBP6.29□□□□□ -1.4
SCARB2-225ENST00000640900 GAGE12JA6NER3 117 aa6.28□□□□□ -1.4
SCARB2-225ENST00000640900 IGLL5B9A064 214 aa6.28□□□□□ -1.4
SCARB2-225ENST00000640900 GAGE1Q13065 139 aa6.28□□□□□ -1.4
SCARB2-225ENST00000640900 GAGE4Q13068 117 aa6.28□□□□□ -1.4
SCARB2-225ENST00000640900 GAGE5Q13069 117 aa6.28□□□□□ -1.4
SCARB2-225ENST00000640900 GAGE13Q4V321 117 aa6.28□□□□□ -1.4
SCARB2-225ENST00000640900 NTM-AS1Q6ZSK4 140 aa6.28□□□□□ -1.4
SCARB2-225ENST00000640900 NEGR1Q7Z3B1 354 aa6.28□□□□□ -1.4
SCARB2-225ENST00000640900 ATP6V0E2Q8NHE4 81 aa6.28□□□□□ -1.4
SCARB2-225ENST00000640900 GTSF1LQ9H1H1 148 aa6.28□□□□□ -1.4
SCARB2-225ENST00000640900 ST20Q9HBF5 79 aa6.28□□□□□ -1.4
SCARB2-225ENST00000640900 TNFRSF18Q9Y5U5 241 aa6.28□□□□□ -1.4
SCARB2-225ENST00000640900 KMT2AQ03164 3969 aa6.27□□□□□ -1.41
SCARB2-225ENST00000640900 VCYO14598 125 aa6.27□□□□□ -1.41
SCARB2-225ENST00000640900 TSHBP01222 138 aa6.27□□□□□ -1.41
SCARB2-225ENST00000640900 SRIP30626 198 aa6.27□□□□□ -1.41
SCARB2-225ENST00000640900 ESRGQ1W209 222 aa6.27□□□□□ -1.41
SCARB2-225ENST00000640900 LYPD5Q6UWN5 251 aa6.27□□□□□ -1.41
SCARB2-225ENST00000640900 C18orf32Q8TCD1 76 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms