RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 C16orf74Q96GX8 76 aa6.83□□□□□ -1.32
PDLIM5-223ENST00000627587 AP5S1Q9NUS5 200 aa6.83□□□□□ -1.32
PDLIM5-223ENST00000627587 KIR2DL5BA0A0G2JN68 375 aa6.83□□□□□ -1.32
PDLIM5-223ENST00000627587 KIR2DL5BA0A0G2JPC4 375 aa6.83□□□□□ -1.32
PDLIM5-223ENST00000627587 PLAC8L1A1L4L8 177 aa6.83□□□□□ -1.32
PDLIM5-223ENST00000627587 F5H697 171 aa6.83□□□□□ -1.32
PDLIM5-223ENST00000627587 PPP1R17O96001 155 aa6.83□□□□□ -1.32
PDLIM5-223ENST00000627587 CRYGDP07320 174 aa6.83□□□□□ -1.32
PDLIM5-223ENST00000627587 IFI27P40305 119 aaPredicted RBP6.83□□□□□ -1.32
PDLIM5-223ENST00000627587 APOC4P55056 127 aa6.83□□□□□ -1.32
PDLIM5-223ENST00000627587 COTL1Q14019 142 aa6.83□□□□□ -1.32
PDLIM5-223ENST00000627587 KIR2DL5AQ8N109 375 aa6.83□□□□□ -1.32
PDLIM5-223ENST00000627587 FAM19A2Q8N3H0 131 aa6.83□□□□□ -1.32
PDLIM5-223ENST00000627587 KIR2DL5BQ8NHK3 375 aa6.83□□□□□ -1.32
PDLIM5-223ENST00000627587 TM2D3Q9BRN9 247 aa6.83□□□□□ -1.32
PDLIM5-223ENST00000627587 NDUFAF3Q9BU61 184 aa6.83□□□□□ -1.32
PDLIM5-223ENST00000627587 ZNF56Q15929 161 aa6.82□□□□□ -1.32
PDLIM5-223ENST00000627587 NXT2Q9NPJ8 142 aaKnown RBP6.82□□□□□ -1.32
PDLIM5-223ENST00000627587 MRPL16Q9NX20 251 aaKnown RBP6.82□□□□□ -1.32
PDLIM5-223ENST00000627587 TENM2Q9NT68 2774 aa6.82□□□□□ -1.32
PDLIM5-223ENST00000627587 SMIM6P0DI80 62 aa6.81□□□□□ -1.32
PDLIM5-223ENST00000627587 IGHV4-30-4P0DP06 118 aa6.81□□□□□ -1.32
PDLIM5-223ENST00000627587 PCP4P48539 62 aa6.81□□□□□ -1.32
PDLIM5-223ENST00000627587 C21orf62-AS1Q17RA5 79 aa6.81□□□□□ -1.32
PDLIM5-223ENST00000627587 SUMO4Q6EEV6 95 aa6.81□□□□□ -1.32
PDLIM5-223ENST00000627587 UFSP1Q6NVU6 142 aa6.81□□□□□ -1.32
PDLIM5-223ENST00000627587 RASL10AQ92737 203 aa6.81□□□□□ -1.32
PDLIM5-223ENST00000627587 EPPK1P58107 5090 aaKnown RBP6.81□□□□□ -1.32
PDLIM5-223ENST00000627587 IGLV2-18A0A075B6J9 118 aa6.81□□□□□ -1.32
PDLIM5-223ENST00000627587 A0A096LNJ9 63 aa6.81□□□□□ -1.32
PDLIM5-223ENST00000627587 TRGV1A0A0A0MS02 117 aa6.81□□□□□ -1.32
PDLIM5-223ENST00000627587 IGHV1-24A0A0C4DH33 117 aa6.81□□□□□ -1.32
PDLIM5-223ENST00000627587 DAZ2Q13117 558 aaKnown RBP6.81□□□□□ -1.32
PDLIM5-223ENST00000627587 PMCHL1Q16048 86 aa6.81□□□□□ -1.32
PDLIM5-223ENST00000627587 PYY3Q5JQD4 70 aa6.81□□□□□ -1.32
PDLIM5-223ENST00000627587 Q6ZWC4 215 aa6.81□□□□□ -1.32
PDLIM5-223ENST00000627587 RPL39LQ96EH5 51 aaKnown RBP6.81□□□□□ -1.32
PDLIM5-223ENST00000627587 SPATA25Q9BR10 227 aa6.81□□□□□ -1.32
PDLIM5-223ENST00000627587 C20orf78Q9BR46 151 aa6.81□□□□□ -1.32
PDLIM5-223ENST00000627587 EDA2RQ9HAV5 297 aa6.81□□□□□ -1.32
PDLIM5-223ENST00000627587 LINC01546A6NGU7 62 aa6.8□□□□□ -1.32
PDLIM5-223ENST00000627587 RHODO00212 210 aa6.8□□□□□ -1.32
PDLIM5-223ENST00000627587 SUMO2P61956 95 aaKnown RBP6.8□□□□□ -1.32
PDLIM5-223ENST00000627587 LGALS9BQ3B8N2 356 aa6.8□□□□□ -1.32
PDLIM5-223ENST00000627587 CFAP126Q5VTH2 177 aa6.8□□□□□ -1.32
PDLIM5-223ENST00000627587 ZFAND6Q6FIF0 208 aa6.8□□□□□ -1.32
PDLIM5-223ENST00000627587 CDPF1Q6NVV7 123 aa6.8□□□□□ -1.32
PDLIM5-223ENST00000627587 Q8N8P6 123 aa6.8□□□□□ -1.32
PDLIM5-223ENST00000627587 NOP10Q9NPE3 64 aaKnown RBP6.8□□□□□ -1.32
PDLIM5-223ENST00000627587 SMIM9A6NGZ8 99 aa6.79□□□□□ -1.32
PDLIM5-223ENST00000627587 H7C1H1 209 aa6.79□□□□□ -1.32
PDLIM5-223ENST00000627587 SMIM2Q9BVW6 85 aa6.79□□□□□ -1.32
PDLIM5-223ENST00000627587 IGHV3-73A0A0B4J1V6 119 aa6.79□□□□□ -1.32
PDLIM5-223ENST00000627587 M0QY20 66 aa6.79□□□□□ -1.32
PDLIM5-223ENST00000627587 RS1O15537 224 aa6.79□□□□□ -1.32
PDLIM5-223ENST00000627587 LEPROTL1O95214 131 aa6.79□□□□□ -1.32
PDLIM5-223ENST00000627587 DEFB135Q30KP9 77 aa6.79□□□□□ -1.32
PDLIM5-223ENST00000627587 C12orf57Q99622 126 aa6.79□□□□□ -1.32
PDLIM5-223ENST00000627587 ST20Q9HBF5 79 aa6.79□□□□□ -1.32
PDLIM5-223ENST00000627587 X6R8D5 127 aa6.79□□□□□ -1.32
PDLIM5-223ENST00000627587 JOSD1Q15040 202 aaPredicted RBP6.78□□□□□ -1.32
PDLIM5-223ENST00000627587 ZFP2Q6ZN57 461 aa6.78□□□□□ -1.32
PDLIM5-223ENST00000627587 Q6ZTI0 123 aa6.78□□□□□ -1.32
PDLIM5-223ENST00000627587 LINC00173Q6ZV60 143 aa6.78□□□□□ -1.32
PDLIM5-223ENST00000627587 OR4C5Q8NGB2 326 aa6.78□□□□□ -1.32
PDLIM5-223ENST00000627587 OVOL2Q9BRP0 275 aa6.78□□□□□ -1.32
PDLIM5-223ENST00000627587 TRBV6-5A0A0K0K1A5 114 aa6.77□□□□□ -1.33
PDLIM5-223ENST00000627587 HBDP02042 147 aa6.77□□□□□ -1.33
PDLIM5-223ENST00000627587 KRTDAPP60985 99 aa6.77□□□□□ -1.33
PDLIM5-223ENST00000627587 Q6ZSN1 163 aa6.77□□□□□ -1.33
PDLIM5-223ENST00000627587 NIT2Q9NQR4 276 aa6.77□□□□□ -1.33
PDLIM5-223ENST00000627587 Q9UF83 564 aa6.77□□□□□ -1.33
PDLIM5-223ENST00000627587 HSPB8Q9UJY1 196 aa6.77□□□□□ -1.33
PDLIM5-223ENST00000627587 TRAV4A0A0B4J268 109 aa6.77□□□□□ -1.33
PDLIM5-223ENST00000627587 K7EMI3 77 aa6.77□□□□□ -1.33
PDLIM5-223ENST00000627587 EMP1P54849 157 aa6.77□□□□□ -1.33
PDLIM5-223ENST00000627587 RPL32P62910 135 aaKnown RBP6.77□□□□□ -1.33
PDLIM5-223ENST00000627587 LAGE3Q14657 143 aa6.77□□□□□ -1.33
PDLIM5-223ENST00000627587 Q8N976 141 aa6.77□□□□□ -1.33
PDLIM5-223ENST00000627587 TMEM70Q9BUB7 260 aa6.77□□□□□ -1.33
PDLIM5-223ENST00000627587 PLECQ15149 4684 aaKnown RBP6.76□□□□□ -1.33
PDLIM5-223ENST00000627587 TRGV2A0A075B6R0 118 aa6.76□□□□□ -1.33
PDLIM5-223ENST00000627587 GAGE12BA1L429 117 aa6.76□□□□□ -1.33
PDLIM5-223ENST00000627587 SDHAF1A6NFY7 115 aa6.76□□□□□ -1.33
PDLIM5-223ENST00000627587 TCAPO15273 167 aa6.76□□□□□ -1.33
PDLIM5-223ENST00000627587 GAGE7O76087 117 aa6.76□□□□□ -1.33
PDLIM5-223ENST00000627587 SCGB1D1O95968 90 aa6.76□□□□□ -1.33
PDLIM5-223ENST00000627587 C3orf79P0CE67 100 aa6.76□□□□□ -1.33
PDLIM5-223ENST00000627587 GAGE12FP0CL80 117 aa6.76□□□□□ -1.33
PDLIM5-223ENST00000627587 GAGE12GP0CL81 117 aa6.76□□□□□ -1.33
PDLIM5-223ENST00000627587 GAGE12IP0CL82 117 aa6.76□□□□□ -1.33
PDLIM5-223ENST00000627587 POLR2KP53803 58 aaKnown RBP6.76□□□□□ -1.33
PDLIM5-223ENST00000627587 OR11H2Q8NH07 326 aa6.76□□□□□ -1.33
PDLIM5-223ENST00000627587 VCYO14598 125 aa6.75□□□□□ -1.33
PDLIM5-223ENST00000627587 IGHV3-53P01767 116 aa6.75□□□□□ -1.33
PDLIM5-223ENST00000627587 P0DMU3 169 aa6.75□□□□□ -1.33
PDLIM5-223ENST00000627587 FAM231AP0DMU4 169 aa6.75□□□□□ -1.33
PDLIM5-223ENST00000627587 FAM231CP0DMU5 169 aa6.75□□□□□ -1.33
PDLIM5-223ENST00000627587 FCER1GP30273 86 aa6.75□□□□□ -1.33
PDLIM5-223ENST00000627587 ORMDL2Q53FV1 153 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms