RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, human

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GCDH-213	ENST00000590627	TRAPPC1	Q9Y5R8	145 aa		11.62	□□□□□ -0.55
GCDH-213	ENST00000590627	TRAV10	A0A0B4J240	114 aa		11.61	□□□□□ -0.55
GCDH-213	ENST00000590627		F5H768	121 aa		11.61	□□□□□ -0.55
GCDH-213	ENST00000590627		M0QY20	66 aa		11.61	□□□□□ -0.55
GCDH-213	ENST00000590627	PPBP	P02775	128 aa		11.61	□□□□□ -0.55
GCDH-213	ENST00000590627	SLC25A29	Q8N8R3	303 aa		11.61	□□□□□ -0.55
GCDH-213	ENST00000590627	MRPL18	Q9H0U6	180 aa	Known RBP	11.61	□□□□□ -0.55
GCDH-213	ENST00000590627	HHLA3	Q9XRX5	114 aa		11.61	□□□□□ -0.55
GCDH-213	ENST00000590627	DEFB131B	A0A096LNP1	70 aa		11.6	□□□□□ -0.55
GCDH-213	ENST00000590627	TRBV10-1	A0A0K0K1A3	114 aa		11.6	□□□□□ -0.55
GCDH-213	ENST00000590627		H7C1H1	209 aa		11.6	□□□□□ -0.55
GCDH-213	ENST00000590627	CRYBA4	P53673	196 aa		11.6	□□□□□ -0.55
GCDH-213	ENST00000590627	TRAV26-2	A0A0B4J265	109 aa		11.59	□□□□□ -0.55
GCDH-213	ENST00000590627		K7EQD1	137 aa		11.59	□□□□□ -0.55
GCDH-213	ENST00000590627	HTN3	P15516	51 aa		11.59	□□□□□ -0.55
GCDH-213	ENST00000590627	RPS10	P46783	165 aa	Known RBP	11.59	□□□□□ -0.55
GCDH-213	ENST00000590627	FABP9	Q0Z7S8	132 aa		11.59	□□□□□ -0.55
GCDH-213	ENST00000590627	RHOH	Q15669	191 aa		11.59	□□□□□ -0.55
GCDH-213	ENST00000590627		H3BNG1	76 aa		11.58	□□□□□ -0.56
GCDH-213	ENST00000590627	PPP1R17	O96001	155 aa		11.58	□□□□□ -0.56
GCDH-213	ENST00000590627	CKS2	P33552	79 aa		11.58	□□□□□ -0.56
GCDH-213	ENST00000590627	ORMDL3	Q8N138	153 aa		11.58	□□□□□ -0.56
GCDH-213	ENST00000590627	VSIG2	Q96IQ7	327 aa		11.58	□□□□□ -0.56
GCDH-213	ENST00000590627	PRADC1	Q9BSG0	188 aa		11.58	□□□□□ -0.56
GCDH-213	ENST00000590627		D6R8Y8	96 aa		11.57	□□□□□ -0.56
GCDH-213	ENST00000590627	PHOX2A	O14813	284 aa		11.57	□□□□□ -0.56
GCDH-213	ENST00000590627	PAX4	O43316	350 aa		11.57	□□□□□ -0.56
GCDH-213	ENST00000590627	GAS8-AS1	O95177	125 aa		11.57	□□□□□ -0.56
GCDH-213	ENST00000590627	NRAC	Q8N912	160 aa		11.57	□□□□□ -0.56
GCDH-213	ENST00000590627	APLN	Q9ULZ1	77 aa		11.57	□□□□□ -0.56
GCDH-213	ENST00000590627	LAMTOR2	Q9Y2Q5	125 aa		11.57	□□□□□ -0.56
GCDH-213	ENST00000590627	TRAV26-1	A0A087WT03	109 aa		11.56	□□□□□ -0.56
GCDH-213	ENST00000590627	TRBV6-5	A0A0K0K1A5	114 aa		11.56	□□□□□ -0.56
GCDH-213	ENST00000590627	SMKR1	H3BMG3	65 aa		11.56	□□□□□ -0.56
GCDH-213	ENST00000590627	NCR2	O95944	276 aa		11.56	□□□□□ -0.56
GCDH-213	ENST00000590627	KIAA1644	Q3SXP7	199 aa		11.56	□□□□□ -0.56
GCDH-213	ENST00000590627	DNAJC30	Q96LL9	226 aa		11.56	□□□□□ -0.56
GCDH-213	ENST00000590627	NIT2	Q9NQR4	276 aa		11.56	□□□□□ -0.56
GCDH-213	ENST00000590627		Q9UF83	564 aa		11.56	□□□□□ -0.56
GCDH-213	ENST00000590627	TRGC2	P03986	189 aa		11.55	□□□□□ -0.56
GCDH-213	ENST00000590627		P0DMU3	169 aa		11.55	□□□□□ -0.56
GCDH-213	ENST00000590627	FAM231A	P0DMU4	169 aa		11.55	□□□□□ -0.56
GCDH-213	ENST00000590627	FAM231C	P0DMU5	169 aa		11.55	□□□□□ -0.56
GCDH-213	ENST00000590627	NEXN-AS1	Q8NBZ9	246 aa		11.55	□□□□□ -0.56
GCDH-213	ENST00000590627	PRELID3A	Q96N28	172 aa		11.55	□□□□□ -0.56
GCDH-213	ENST00000590627	ALKBH7	Q9BT30	221 aa	Predicted RBP	11.55	□□□□□ -0.56
GCDH-213	ENST00000590627	KIAA1109	Q2LD37	5005 aa		11.54	□□□□□ -0.56
GCDH-213	ENST00000590627	IGLL5	B9A064	214 aa		11.54	□□□□□ -0.56
GCDH-213	ENST00000590627	LINC00694	P0DN24	101 aa		11.54	□□□□□ -0.56
GCDH-213	ENST00000590627	OR10J3	Q5JRS4	329 aa		11.54	□□□□□ -0.56
GCDH-213	ENST00000590627	RPL39L	Q96EH5	51 aa	Known RBP	11.54	□□□□□ -0.56
GCDH-213	ENST00000590627	TRBV7-3	A0A075B6L6	115 aa		11.53	□□□□□ -0.56
GCDH-213	ENST00000590627		A0A0J9YY99	117 aa		11.53	□□□□□ -0.56
GCDH-213	ENST00000590627	TNFRSF6B	O95407	300 aa		11.53	□□□□□ -0.56
GCDH-213	ENST00000590627	GYPE	P15421	78 aa		11.53	□□□□□ -0.56
GCDH-213	ENST00000590627	RPL36A	P83881	106 aa	Known RBP	11.53	□□□□□ -0.56
GCDH-213	ENST00000590627	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	11.53	□□□□□ -0.56
GCDH-213	ENST00000590627	RPL36AL	Q969Q0	106 aa	Known RBP	11.53	□□□□□ -0.56
GCDH-213	ENST00000590627	C20orf78	Q9BR46	151 aa		11.53	□□□□□ -0.56
GCDH-213	ENST00000590627	TNFRSF18	Q9Y5U5	241 aa		11.53	□□□□□ -0.56
GCDH-213	ENST00000590627	PCLO	Q9Y6V0	5065 aa		11.53	□□□□□ -0.56
GCDH-213	ENST00000590627	FAT2	Q9NYQ8	4349 aa		11.52	□□□□□ -0.57
GCDH-213	ENST00000590627	LOC100131303	A0A0U1RQF7	123 aa		11.52	□□□□□ -0.57
GCDH-213	ENST00000590627	PRSS47	A8MTI9	375 aa		11.52	□□□□□ -0.57
GCDH-213	ENST00000590627	NPY	P01303	97 aa		11.52	□□□□□ -0.57
GCDH-213	ENST00000590627	RPL32	P62910	135 aa	Known RBP	11.52	□□□□□ -0.57
GCDH-213	ENST00000590627	SRI	P30626	198 aa		11.51	□□□□□ -0.57
GCDH-213	ENST00000590627	UBE2D3	P61077	147 aa		11.51	□□□□□ -0.57
GCDH-213	ENST00000590627	SUMO2	P61956	95 aa	Known RBP	11.51	□□□□□ -0.57
GCDH-213	ENST00000590627	UBE2D2	P62837	147 aa		11.51	□□□□□ -0.57
GCDH-213	ENST00000590627	MRPL23	Q16540	153 aa	Known RBP	11.51	□□□□□ -0.57
GCDH-213	ENST00000590627	ZNRF2	Q8NHG8	242 aa		11.51	□□□□□ -0.57
GCDH-213	ENST00000590627	ST20	Q9HBF5	79 aa		11.51	□□□□□ -0.57
GCDH-213	ENST00000590627	ICOS	Q9Y6W8	199 aa		11.51	□□□□□ -0.57
GCDH-213	ENST00000590627	DNAH2	Q9P225	4427 aa		11.51	□□□□□ -0.57
GCDH-213	ENST00000590627	GAGE12J	A6NER3	117 aa		11.5	□□□□□ -0.57
GCDH-213	ENST00000590627	POLR2K	P53803	58 aa	Known RBP	11.5	□□□□□ -0.57
GCDH-213	ENST00000590627	GAGE1	Q13065	139 aa		11.5	□□□□□ -0.57
GCDH-213	ENST00000590627	GAGE4	Q13068	117 aa		11.5	□□□□□ -0.57
GCDH-213	ENST00000590627	GAGE5	Q13069	117 aa		11.5	□□□□□ -0.57
GCDH-213	ENST00000590627	GAGE13	Q4V321	117 aa		11.5	□□□□□ -0.57
GCDH-213	ENST00000590627	SH2D6	Q7Z4S9	175 aa		11.5	□□□□□ -0.57
GCDH-213	ENST00000590627	C15orf53	Q8NAA6	179 aa		11.5	□□□□□ -0.57
GCDH-213	ENST00000590627		A0A096LPF7	62 aa		11.49	□□□□□ -0.57
GCDH-213	ENST00000590627	SDHAF1	A6NFY7	115 aa		11.49	□□□□□ -0.57
GCDH-213	ENST00000590627	DAZ4	Q86SG3	579 aa	Known RBP	11.49	□□□□□ -0.57
GCDH-213	ENST00000590627	TMEM70	Q9BUB7	260 aa		11.49	□□□□□ -0.57
GCDH-213	ENST00000590627	DAZ3	Q9NR90	486 aa	Known RBP	11.49	□□□□□ -0.57
GCDH-213	ENST00000590627	DNAH17	Q9UFH2	4485 aa		11.48	□□□□□ -0.57
GCDH-213	ENST00000590627	TRBV27	A0A0K0K1C4	114 aa		11.48	□□□□□ -0.57
GCDH-213	ENST00000590627	VCY	O14598	125 aa		11.48	□□□□□ -0.57
GCDH-213	ENST00000590627	LINC00336	Q6ZUF6	198 aa		11.48	□□□□□ -0.57
GCDH-213	ENST00000590627	MAP1LC3A	Q9H492	121 aa		11.48	□□□□□ -0.57
GCDH-213	ENST00000590627	ATP6V0E2	Q8NHE4	81 aa		11.47	□□□□□ -0.57
GCDH-213	ENST00000590627	C18orf32	Q8TCD1	76 aa		11.47	□□□□□ -0.57
GCDH-213	ENST00000590627	SMIM2	Q9BVW6	85 aa		11.47	□□□□□ -0.57
GCDH-213	ENST00000590627	PKHD1	P08F94	4074 aa		11.46	□□□□□ -0.57
GCDH-213	ENST00000590627	IGLV2-18	A0A075B6J9	118 aa		11.46	□□□□□ -0.57
GCDH-213	ENST00000590627	C1orf196	B1AJZ1	125 aa		11.46	□□□□□ -0.57
GCDH-213	ENST00000590627	NEGR1	Q7Z3B1	354 aa		11.46	□□□□□ -0.57

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