RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 D6R8Y8 96 aa11.46□□□□□ -0.57
CDK5RAP3-228ENST00000583363 TRGC2P03986 189 aa11.46□□□□□ -0.57
CDK5RAP3-228ENST00000583363 Q9UF83 564 aa11.46□□□□□ -0.57
CDK5RAP3-228ENST00000583363 TRBV10-1A0A0K0K1A3 114 aa11.45□□□□□ -0.58
CDK5RAP3-228ENST00000583363 H7C1H1 209 aa11.45□□□□□ -0.58
CDK5RAP3-228ENST00000583363 K7EQD1 137 aa11.45□□□□□ -0.58
CDK5RAP3-228ENST00000583363 PHOX2AO14813 284 aa11.45□□□□□ -0.58
CDK5RAP3-228ENST00000583363 NCR2O95944 276 aa11.45□□□□□ -0.58
CDK5RAP3-228ENST00000583363 P0DMU3 169 aa11.45□□□□□ -0.58
CDK5RAP3-228ENST00000583363 FAM231AP0DMU4 169 aa11.45□□□□□ -0.58
CDK5RAP3-228ENST00000583363 FAM231CP0DMU5 169 aa11.45□□□□□ -0.58
CDK5RAP3-228ENST00000583363 ORMDL3Q8N138 153 aa11.45□□□□□ -0.58
CDK5RAP3-228ENST00000583363 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.45□□□□□ -0.58
CDK5RAP3-228ENST00000583363 VSIG2Q96IQ7 327 aa11.45□□□□□ -0.58
CDK5RAP3-228ENST00000583363 TRAV26-1A0A087WT03 109 aa11.44□□□□□ -0.58
CDK5RAP3-228ENST00000583363 PAX4O43316 350 aa11.44□□□□□ -0.58
CDK5RAP3-228ENST00000583363 RHOHQ15669 191 aa11.44□□□□□ -0.58
CDK5RAP3-228ENST00000583363 NRACQ8N912 160 aa11.44□□□□□ -0.58
CDK5RAP3-228ENST00000583363 PHLDA1Q8WV24 401 aaPredicted RBP11.44□□□□□ -0.58
CDK5RAP3-228ENST00000583363 RPL39LQ96EH5 51 aaKnown RBP11.44□□□□□ -0.58
CDK5RAP3-228ENST00000583363 PRADC1Q9BSG0 188 aa11.44□□□□□ -0.58
CDK5RAP3-228ENST00000583363 NIT2Q9NQR4 276 aa11.44□□□□□ -0.58
CDK5RAP3-228ENST00000583363 PPP1R17O96001 155 aa11.43□□□□□ -0.58
CDK5RAP3-228ENST00000583363 NEXN-AS1Q8NBZ9 246 aa11.43□□□□□ -0.58
CDK5RAP3-228ENST00000583363 DNAJC30Q96LL9 226 aa11.43□□□□□ -0.58
CDK5RAP3-228ENST00000583363 PRELID3AQ96N28 172 aa11.43□□□□□ -0.58
CDK5RAP3-228ENST00000583363 ALKBH7Q9BT30 221 aaPredicted RBP11.43□□□□□ -0.58
CDK5RAP3-228ENST00000583363 A0A0J9YY99 117 aa11.42□□□□□ -0.58
CDK5RAP3-228ENST00000583363 TRBV6-5A0A0K0K1A5 114 aa11.42□□□□□ -0.58
CDK5RAP3-228ENST00000583363 LOC100131303A0A0U1RQF7 123 aa11.42□□□□□ -0.58
CDK5RAP3-228ENST00000583363 TNFRSF6BO95407 300 aa11.42□□□□□ -0.58
CDK5RAP3-228ENST00000583363 OR10J3Q5JRS4 329 aa11.42□□□□□ -0.58
CDK5RAP3-228ENST00000583363 LAMTOR2Q9Y2Q5 125 aa11.42□□□□□ -0.58
CDK5RAP3-228ENST00000583363 H3BNG1 76 aa11.41□□□□□ -0.58
CDK5RAP3-228ENST00000583363 NPYP01303 97 aa11.41□□□□□ -0.58
CDK5RAP3-228ENST00000583363 GYPEP15421 78 aa11.41□□□□□ -0.58
CDK5RAP3-228ENST00000583363 ZNRF2Q8NHG8 242 aa11.41□□□□□ -0.58
CDK5RAP3-228ENST00000583363 TNFRSF18Q9Y5U5 241 aa11.41□□□□□ -0.58
CDK5RAP3-228ENST00000583363 TRBV7-3A0A075B6L6 115 aa11.4□□□□□ -0.58
CDK5RAP3-228ENST00000583363 GAGE12JA6NER3 117 aa11.4□□□□□ -0.58
CDK5RAP3-228ENST00000583363 PRSS47A8MTI9 375 aa11.4□□□□□ -0.58
CDK5RAP3-228ENST00000583363 SRIP30626 198 aa11.4□□□□□ -0.58
CDK5RAP3-228ENST00000583363 RPL36AP83881 106 aaKnown RBP11.4□□□□□ -0.58
CDK5RAP3-228ENST00000583363 GAGE1Q13065 139 aa11.4□□□□□ -0.58
CDK5RAP3-228ENST00000583363 GAGE4Q13068 117 aa11.4□□□□□ -0.58
CDK5RAP3-228ENST00000583363 GAGE5Q13069 117 aa11.4□□□□□ -0.58
CDK5RAP3-228ENST00000583363 GAGE13Q4V321 117 aa11.4□□□□□ -0.58
CDK5RAP3-228ENST00000583363 RPL36ALQ969Q0 106 aaKnown RBP11.4□□□□□ -0.58
CDK5RAP3-228ENST00000583363 C20orf78Q9BR46 151 aa11.4□□□□□ -0.58
CDK5RAP3-228ENST00000583363 ST20Q9HBF5 79 aa11.4□□□□□ -0.58
CDK5RAP3-228ENST00000583363 POLR2KP53803 58 aaKnown RBP11.39□□□□□ -0.59
CDK5RAP3-228ENST00000583363 PLECQ15149 4684 aaKnown RBP11.39□□□□□ -0.59
CDK5RAP3-228ENST00000583363 LINC00694P0DN24 101 aa11.38□□□□□ -0.59
CDK5RAP3-228ENST00000583363 UBE2D3P61077 147 aa11.38□□□□□ -0.59
CDK5RAP3-228ENST00000583363 SUMO2P61956 95 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP3-228ENST00000583363 UBE2D2P62837 147 aa11.38□□□□□ -0.59
CDK5RAP3-228ENST00000583363 CEMP1Q6PRD7 247 aaPredicted RBP11.38□□□□□ -0.59
CDK5RAP3-228ENST00000583363 A0A096LPF7 62 aa11.37□□□□□ -0.59
CDK5RAP3-228ENST00000583363 RPL32P62910 135 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP3-228ENST00000583363 MRPL23Q16540 153 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP3-228ENST00000583363 TMEM70Q9BUB7 260 aa11.37□□□□□ -0.59
CDK5RAP3-228ENST00000583363 LOC389332A0A1B0GUA5 103 aa11.36□□□□□ -0.59
CDK5RAP3-228ENST00000583363 SDHAF1A6NFY7 115 aa11.36□□□□□ -0.59
CDK5RAP3-228ENST00000583363 C1orf196B1AJZ1 125 aa11.36□□□□□ -0.59
CDK5RAP3-228ENST00000583363 VCYO14598 125 aa11.36□□□□□ -0.59
CDK5RAP3-228ENST00000583363 MAP1LC3AQ9H492 121 aa11.36□□□□□ -0.59
CDK5RAP3-228ENST00000583363 ICOSQ9Y6W8 199 aa11.36□□□□□ -0.59
CDK5RAP3-228ENST00000583363 IGLL5B9A064 214 aa11.35□□□□□ -0.59
CDK5RAP3-228ENST00000583363 DAZ4Q86SG3 579 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-228ENST00000583363 C18orf32Q8TCD1 76 aa11.35□□□□□ -0.59
CDK5RAP3-228ENST00000583363 DAZ3Q9NR90 486 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-228ENST00000583363 IGLV2-18A0A075B6J9 118 aa11.34□□□□□ -0.59
CDK5RAP3-228ENST00000583363 TRBV27A0A0K0K1C4 114 aa11.34□□□□□ -0.59
CDK5RAP3-228ENST00000583363 NUPR2A6NF83 97 aa11.34□□□□□ -0.59
CDK5RAP3-228ENST00000583363 NUDT3O95989 172 aa11.34□□□□□ -0.59
CDK5RAP3-228ENST00000583363 PMCHP20382 165 aa11.34□□□□□ -0.59
CDK5RAP3-228ENST00000583363 Q0VG73 95 aa11.34□□□□□ -0.59
CDK5RAP3-228ENST00000583363 IQCJQ1A5X6 159 aa11.34□□□□□ -0.59
CDK5RAP3-228ENST00000583363 SH2D6Q7Z4S9 175 aa11.34□□□□□ -0.59
CDK5RAP3-228ENST00000583363 C15orf53Q8NAA6 179 aa11.34□□□□□ -0.59
CDK5RAP3-228ENST00000583363 ATP6V0E2Q8NHE4 81 aa11.34□□□□□ -0.59
CDK5RAP3-228ENST00000583363 SMIM2Q9BVW6 85 aa11.34□□□□□ -0.59
CDK5RAP3-228ENST00000583363 IGHV3-38A0A0C4DH36 116 aa11.33□□□□□ -0.6
CDK5RAP3-228ENST00000583363 I3L3M4 83 aa11.33□□□□□ -0.6
CDK5RAP3-228ENST00000583363 HIST1H2BKO60814 126 aa11.33□□□□□ -0.6
CDK5RAP3-228ENST00000583363 HIST1H2BJP06899 126 aa11.33□□□□□ -0.6
CDK5RAP3-228ENST00000583363 HIST1H2BOP23527 126 aa11.33□□□□□ -0.6
CDK5RAP3-228ENST00000583363 HIST1H2BBP33778 126 aa11.33□□□□□ -0.6
CDK5RAP3-228ENST00000583363 IFI27P40305 119 aaPredicted RBP11.33□□□□□ -0.6
CDK5RAP3-228ENST00000583363 HIST1H2BDP58876 126 aa11.33□□□□□ -0.6
CDK5RAP3-228ENST00000583363 HIST1H2BCP62807 126 aa11.33□□□□□ -0.6
CDK5RAP3-228ENST00000583363 HIST2H2BEQ16778 126 aa11.33□□□□□ -0.6
CDK5RAP3-228ENST00000583363 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.33□□□□□ -0.6
CDK5RAP3-228ENST00000583363 NEGR1Q7Z3B1 354 aa11.33□□□□□ -0.6
CDK5RAP3-228ENST00000583363 Q8N8P6 123 aa11.33□□□□□ -0.6
CDK5RAP3-228ENST00000583363 HIST1H2BHQ93079 126 aa11.33□□□□□ -0.6
CDK5RAP3-228ENST00000583363 HIST1H2BNQ99877 126 aa11.33□□□□□ -0.6
CDK5RAP3-228ENST00000583363 HIST1H2BMQ99879 126 aa11.33□□□□□ -0.6
CDK5RAP3-228ENST00000583363 KLK5Q9Y337 293 aaPredicted RBP11.33□□□□□ -0.6
CDK5RAP3-228ENST00000583363 ALMS1Q8TCU4 4167 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms