RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 LOC100131303A0A0U1RQF7 123 aa9.51□□□□□ -0.89
ITGB4-209ENST00000583327 D6R8Y8 96 aa9.51□□□□□ -0.89
ITGB4-209ENST00000583327 SMKR1H3BMG3 65 aa9.51□□□□□ -0.89
ITGB4-209ENST00000583327 CKS2P33552 79 aa9.51□□□□□ -0.89
ITGB4-209ENST00000583327 KIAA1644Q3SXP7 199 aa9.51□□□□□ -0.89
ITGB4-209ENST00000583327 ORMDL3Q8N138 153 aa9.51□□□□□ -0.89
ITGB4-209ENST00000583327 PRADC1Q9BSG0 188 aa9.51□□□□□ -0.89
ITGB4-209ENST00000583327 ALKBH7Q9BT30 221 aaPredicted RBP9.51□□□□□ -0.89
ITGB4-209ENST00000583327 LAMTOR2Q9Y2Q5 125 aa9.51□□□□□ -0.89
ITGB4-209ENST00000583327 STAB2Q8WWQ8 2551 aa9.51□□□□□ -0.89
ITGB4-209ENST00000583327 TRBV7-3A0A075B6L6 115 aa9.5□□□□□ -0.89
ITGB4-209ENST00000583327 A0A0J9YY99 117 aa9.5□□□□□ -0.89
ITGB4-209ENST00000583327 PPP1R17O96001 155 aa9.5□□□□□ -0.89
ITGB4-209ENST00000583327 TRGC2P03986 189 aa9.5□□□□□ -0.89
ITGB4-209ENST00000583327 POLR2KP53803 58 aaKnown RBP9.5□□□□□ -0.89
ITGB4-209ENST00000583327 RPL32P62910 135 aaKnown RBP9.5□□□□□ -0.89
ITGB4-209ENST00000583327 RPL39LQ96EH5 51 aaKnown RBP9.5□□□□□ -0.89
ITGB4-209ENST00000583327 A0A096LPF7 62 aa9.49□□□□□ -0.89
ITGB4-209ENST00000583327 TNFRSF6BO95407 300 aa9.49□□□□□ -0.89
ITGB4-209ENST00000583327 NCR2O95944 276 aa9.49□□□□□ -0.89
ITGB4-209ENST00000583327 NPYP01303 97 aa9.49□□□□□ -0.89
ITGB4-209ENST00000583327 GYPEP15421 78 aa9.49□□□□□ -0.89
ITGB4-209ENST00000583327 UBE2D3P61077 147 aa9.49□□□□□ -0.89
ITGB4-209ENST00000583327 UBE2D2P62837 147 aa9.49□□□□□ -0.89
ITGB4-209ENST00000583327 MUC7Q8TAX7 377 aa9.49□□□□□ -0.89
ITGB4-209ENST00000583327 PRELID3AQ96N28 172 aa9.49□□□□□ -0.89
ITGB4-209ENST00000583327 C20orf78Q9BR46 151 aa9.49□□□□□ -0.89
ITGB4-209ENST00000583327 NUPR2A6NF83 97 aa9.48□□□□□ -0.89
ITGB4-209ENST00000583327 RPL36AP83881 106 aaKnown RBP9.48□□□□□ -0.89
ITGB4-209ENST00000583327 ZNRF2Q8NHG8 242 aa9.48□□□□□ -0.89
ITGB4-209ENST00000583327 RPL36ALQ969Q0 106 aaKnown RBP9.48□□□□□ -0.89
ITGB4-209ENST00000583327 IGLV2-18A0A075B6J9 118 aa9.47□□□□□ -0.89
ITGB4-209ENST00000583327 GAGE12JA6NER3 117 aa9.47□□□□□ -0.89
ITGB4-209ENST00000583327 GAGE1Q13065 139 aa9.47□□□□□ -0.89
ITGB4-209ENST00000583327 GAGE4Q13068 117 aa9.47□□□□□ -0.89
ITGB4-209ENST00000583327 GAGE5Q13069 117 aa9.47□□□□□ -0.89
ITGB4-209ENST00000583327 MRPL23Q16540 153 aaKnown RBP9.47□□□□□ -0.89
ITGB4-209ENST00000583327 GAGE13Q4V321 117 aa9.47□□□□□ -0.89
ITGB4-209ENST00000583327 OR10J3Q5JRS4 329 aa9.47□□□□□ -0.89
ITGB4-209ENST00000583327 C15orf53Q8NAA6 179 aa9.47□□□□□ -0.89
ITGB4-209ENST00000583327 ST20Q9HBF5 79 aa9.47□□□□□ -0.89
ITGB4-209ENST00000583327 APLNQ9ULZ1 77 aa9.47□□□□□ -0.89
ITGB4-209ENST00000583327 TNFRSF18Q9Y5U5 241 aa9.47□□□□□ -0.89
ITGB4-209ENST00000583327 TGP01266 2768 aa9.46□□□□□ -0.9
ITGB4-209ENST00000583327 TRBV27A0A0K0K1C4 114 aa9.46□□□□□ -0.9
ITGB4-209ENST00000583327 IGLL5B9A064 214 aa9.46□□□□□ -0.9
ITGB4-209ENST00000583327 SRIP30626 198 aa9.46□□□□□ -0.9
ITGB4-209ENST00000583327 TCTAP57738 103 aa9.46□□□□□ -0.9
ITGB4-209ENST00000583327 SUMO2P61956 95 aaKnown RBP9.46□□□□□ -0.9
ITGB4-209ENST00000583327 SH2D6Q7Z4S9 175 aa9.46□□□□□ -0.9
ITGB4-209ENST00000583327 TMEM70Q9BUB7 260 aa9.46□□□□□ -0.9
ITGB4-209ENST00000583327 ICOSQ9Y6W8 199 aa9.46□□□□□ -0.9
ITGB4-209ENST00000583327 SDHAF1A6NFY7 115 aa9.45□□□□□ -0.9
ITGB4-209ENST00000583327 TIRAPP58753 221 aa9.45□□□□□ -0.9
ITGB4-209ENST00000583327 DAZ4Q86SG3 579 aaKnown RBP9.45□□□□□ -0.9
ITGB4-209ENST00000583327 DAZ3Q9NR90 486 aaKnown RBP9.45□□□□□ -0.9
ITGB4-209ENST00000583327 CSMD3Q7Z407 3707 aa9.45□□□□□ -0.9
ITGB4-209ENST00000583327 VCYO14598 125 aa9.44□□□□□ -0.9
ITGB4-209ENST00000583327 NEGR1Q7Z3B1 354 aa9.44□□□□□ -0.9
ITGB4-209ENST00000583327 ATP6V0E2Q8NHE4 81 aa9.44□□□□□ -0.9
ITGB4-209ENST00000583327 C18orf32Q8TCD1 76 aa9.44□□□□□ -0.9
ITGB4-209ENST00000583327 KLK5Q9Y337 293 aaPredicted RBP9.44□□□□□ -0.9
ITGB4-209ENST00000583327 LINC01546A6NGU7 62 aa9.43□□□□□ -0.9
ITGB4-209ENST00000583327 Q0VG73 95 aa9.43□□□□□ -0.9
ITGB4-209ENST00000583327 LYPD5Q6UWN5 251 aa9.43□□□□□ -0.9
ITGB4-209ENST00000583327 NTM-AS1Q6ZSK4 140 aa9.43□□□□□ -0.9
ITGB4-209ENST00000583327 SMIM2Q9BVW6 85 aa9.43□□□□□ -0.9
ITGB4-209ENST00000583327 GTSF1LQ9H1H1 148 aa9.43□□□□□ -0.9
ITGB4-209ENST00000583327 STARD9Q9P2P6 4700 aa9.42□□□□□ -0.9
ITGB4-209ENST00000583327 C3orf84H3BNL1 204 aa9.42□□□□□ -0.9
ITGB4-209ENST00000583327 I3L3M4 83 aa9.42□□□□□ -0.9
ITGB4-209ENST00000583327 ESRGQ1W209 222 aa9.42□□□□□ -0.9
ITGB4-209ENST00000583327 Q8N8P6 123 aa9.42□□□□□ -0.9
ITGB4-209ENST00000583327 MAP1LC3AQ9H492 121 aa9.42□□□□□ -0.9
ITGB4-209ENST00000583327 PLECQ15149 4684 aaKnown RBP9.41□□□□□ -0.9
ITGB4-209ENST00000583327 NUDT3O95989 172 aa9.41□□□□□ -0.9
ITGB4-209ENST00000583327 TSHBP01222 138 aa9.41□□□□□ -0.9
ITGB4-209ENST00000583327 ZFAND6Q6FIF0 208 aa9.41□□□□□ -0.9
ITGB4-209ENST00000583327 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.41□□□□□ -0.9
ITGB4-209ENST00000583327 URB1-AS1Q96HZ7 61 aa9.41□□□□□ -0.9
ITGB4-209ENST00000583327 NXT2Q9NPJ8 142 aaKnown RBP9.41□□□□□ -0.9
ITGB4-209ENST00000583327 IGHV3-38A0A0C4DH36 116 aa9.4□□□□□ -0.9
ITGB4-209ENST00000583327 K7EMI3 77 aa9.4□□□□□ -0.9
ITGB4-209ENST00000583327 HIST1H2BKO60814 126 aa9.4□□□□□ -0.9
ITGB4-209ENST00000583327 HIST1H2BJP06899 126 aa9.4□□□□□ -0.9
ITGB4-209ENST00000583327 ESDP10768 282 aa9.4□□□□□ -0.9
ITGB4-209ENST00000583327 PMCHP20382 165 aa9.4□□□□□ -0.9
ITGB4-209ENST00000583327 HIST1H2BOP23527 126 aa9.4□□□□□ -0.9
ITGB4-209ENST00000583327 HIST1H2BBP33778 126 aa9.4□□□□□ -0.9
ITGB4-209ENST00000583327 IFI27P40305 119 aaPredicted RBP9.4□□□□□ -0.9
ITGB4-209ENST00000583327 HIST1H2BDP58876 126 aa9.4□□□□□ -0.9
ITGB4-209ENST00000583327 HIST1H2BCP62807 126 aa9.4□□□□□ -0.9
ITGB4-209ENST00000583327 HIST2H2BEQ16778 126 aa9.4□□□□□ -0.9
ITGB4-209ENST00000583327 TMEM97Q5BJF2 176 aa9.4□□□□□ -0.9
ITGB4-209ENST00000583327 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.4□□□□□ -0.9
ITGB4-209ENST00000583327 CASC10Q5T4H9 136 aa9.4□□□□□ -0.9
ITGB4-209ENST00000583327 HIST1H2BHQ93079 126 aa9.4□□□□□ -0.9
ITGB4-209ENST00000583327 HIST1H2BNQ99877 126 aa9.4□□□□□ -0.9
ITGB4-209ENST00000583327 HIST1H2BMQ99879 126 aa9.4□□□□□ -0.9
ITGB4-209ENST00000583327 TRBV6-8A0A0A6YYG3 113 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms