RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 MGAQ8IWI9 3026 aa9.19□□□□□ -0.94
ERBB2-206ENST00000578373 ZNF48Q96MX3 618 aaPredicted RBP9.19□□□□□ -0.94
ERBB2-206ENST00000578373 SIRPDQ9H106 197 aa9.19□□□□□ -0.94
ERBB2-206ENST00000578373 IGLV2-11P01706 119 aa9.19□□□□□ -0.94
ERBB2-206ENST00000578373 MUSTN1Q8IVN3 82 aa9.19□□□□□ -0.94
ERBB2-206ENST00000578373 CARD19Q96LW7 228 aa9.19□□□□□ -0.94
ERBB2-206ENST00000578373 SPAG8Q99932 426 aaPredicted RBP9.19□□□□□ -0.94
ERBB2-206ENST00000578373 NOP10Q9NPE3 64 aaKnown RBP9.19□□□□□ -0.94
ERBB2-206ENST00000578373 LENEPQ9Y5L5 61 aa9.19□□□□□ -0.94
ERBB2-206ENST00000578373 LGALS1P09382 135 aaKnown RBP9.19□□□□□ -0.94
ERBB2-206ENST00000578373 MYCNOSP40205 109 aa9.19□□□□□ -0.94
ERBB2-206ENST00000578373 Q9H8V8 135 aa9.19□□□□□ -0.94
ERBB2-206ENST00000578373 F5H768 121 aa9.18□□□□□ -0.94
ERBB2-206ENST00000578373 SS18Q15532 418 aa9.18□□□□□ -0.94
ERBB2-206ENST00000578373 P0DMU3 169 aa9.18□□□□□ -0.94
ERBB2-206ENST00000578373 FAM231AP0DMU4 169 aa9.18□□□□□ -0.94
ERBB2-206ENST00000578373 FAM231CP0DMU5 169 aa9.18□□□□□ -0.94
ERBB2-206ENST00000578373 C9orf47Q6ZRZ4 202 aa9.18□□□□□ -0.94
ERBB2-206ENST00000578373 DNAH14Q0VDD8 3507 aa9.18□□□□□ -0.94
ERBB2-206ENST00000578373 IGHV4OR15-8A0A075B7B6 117 aa9.17□□□□□ -0.94
ERBB2-206ENST00000578373 A0A087WW49 117 aa9.17□□□□□ -0.94
ERBB2-206ENST00000578373 TET2Q6N021 2002 aaPredicted RBP9.17□□□□□ -0.94
ERBB2-206ENST00000578373 DEFB121Q5J5C9 76 aa9.17□□□□□ -0.94
ERBB2-206ENST00000578373 ESM1Q9NQ30 184 aa9.17□□□□□ -0.94
ERBB2-206ENST00000578373 FLNBO75369 2602 aaKnown RBP9.17□□□□□ -0.94
ERBB2-206ENST00000578373 CPAMD8Q8IZJ3 1885 aa9.17□□□□□ -0.94
ERBB2-206ENST00000578373 CRYGBP07316 175 aa9.17□□□□□ -0.94
ERBB2-206ENST00000578373 LMO4P61968 165 aa9.17□□□□□ -0.94
ERBB2-206ENST00000578373 CDSNQ15517 529 aa9.17□□□□□ -0.94
ERBB2-206ENST00000578373 IGF2-ASQ6U949 168 aa9.17□□□□□ -0.94
ERBB2-206ENST00000578373 C5orf38Q86SI9 138 aa9.17□□□□□ -0.94
ERBB2-206ENST00000578373 MAPKAPK5-AS1Q8N8E1 139 aa9.17□□□□□ -0.94
ERBB2-206ENST00000578373 SMAD5-AS1Q9Y6J3 95 aa9.17□□□□□ -0.94
ERBB2-206ENST00000578373 C19orf84I3L1E1 186 aa9.17□□□□□ -0.94
ERBB2-206ENST00000578373 GHRHP01286 108 aa9.17□□□□□ -0.94
ERBB2-206ENST00000578373 ELANEP08246 267 aa9.17□□□□□ -0.94
ERBB2-206ENST00000578373 IGLC6P0CF74 106 aa9.17□□□□□ -0.94
ERBB2-206ENST00000578373 AGRNO00468 2067 aa9.17□□□□□ -0.94
ERBB2-206ENST00000578373 LAMA1P25391 3075 aa9.17□□□□□ -0.94
ERBB2-206ENST00000578373 C10orf99Q6UWK7 81 aa9.16□□□□□ -0.94
ERBB2-206ENST00000578373 TMEM243Q9BU79 118 aa9.16□□□□□ -0.94
ERBB2-206ENST00000578373 EDA2RQ9HAV5 297 aa9.16□□□□□ -0.94
ERBB2-206ENST00000578373 USP24Q9UPU5 2620 aa9.16□□□□□ -0.94
ERBB2-206ENST00000578373 VPREB3Q9UKI3 123 aa9.15□□□□□ -0.94
ERBB2-206ENST00000578373 TINCRA0A1B0GVN0 87 aa9.15□□□□□ -0.94
ERBB2-206ENST00000578373 C20orf173Q96LM9 149 aa9.15□□□□□ -0.94
ERBB2-206ENST00000578373 C10orf105Q8TEF2 133 aa9.15□□□□□ -0.95
ERBB2-206ENST00000578373 URB1-AS1Q96HZ7 61 aa9.15□□□□□ -0.95
ERBB2-206ENST00000578373 C11orf21Q9P2W6 132 aa9.15□□□□□ -0.95
ERBB2-206ENST00000578373 C15orf53Q8NAA6 179 aa9.14□□□□□ -0.95
ERBB2-206ENST00000578373 XCL1P47992 114 aa9.14□□□□□ -0.95
ERBB2-206ENST00000578373 Q8N976 141 aa9.14□□□□□ -0.95
ERBB2-206ENST00000578373 A0A0J9YY99 117 aa9.14□□□□□ -0.95
ERBB2-206ENST00000578373 DAD1P61803 113 aa9.13□□□□□ -0.95
ERBB2-206ENST00000578373 SPEGQ15772 3267 aa9.13□□□□□ -0.95
ERBB2-206ENST00000578373 ODF3BA8MYP8 253 aa9.13□□□□□ -0.95
ERBB2-206ENST00000578373 B5MCH6 92 aa9.13□□□□□ -0.95
ERBB2-206ENST00000578373 E9PLD3 99 aa9.13□□□□□ -0.95
ERBB2-206ENST00000578373 TMEM61Q8N0U2 210 aa9.13□□□□□ -0.95
ERBB2-206ENST00000578373 C3orf56Q8N813 242 aa9.13□□□□□ -0.95
ERBB2-206ENST00000578373 TOMM6Q96B49 74 aa9.13□□□□□ -0.95
ERBB2-206ENST00000578373 PRM2P04554 102 aa9.13□□□□□ -0.95
ERBB2-206ENST00000578373 HIGD1BQ9P298 99 aa9.13□□□□□ -0.95
ERBB2-206ENST00000578373 PRSS47A8MTI9 375 aa9.12□□□□□ -0.95
ERBB2-206ENST00000578373 IGHG2P01859 326 aa9.12□□□□□ -0.95
ERBB2-206ENST00000578373 TRBV6-1A0A0K0K1D8 114 aa9.12□□□□□ -0.95
ERBB2-206ENST00000578373 TNRC6BQ9UPQ9 1833 aaKnown RBP9.12□□□□□ -0.95
ERBB2-206ENST00000578373 TRAV12-1A0A0B4J245 112 aa9.12□□□□□ -0.95
ERBB2-206ENST00000578373 LY6LH3BQJ8 138 aa9.12□□□□□ -0.95
ERBB2-206ENST00000578373 RHOHQ15669 191 aa9.12□□□□□ -0.95
ERBB2-206ENST00000578373 RNF185Q96GF1 192 aa9.12□□□□□ -0.95
ERBB2-206ENST00000578373 IGLV10-54A0A075B6I4 117 aa9.12□□□□□ -0.95
ERBB2-206ENST00000578373 C2orf91Q6ZV80 131 aa9.12□□□□□ -0.95
ERBB2-206ENST00000578373 H3BUA1 57 aa9.11□□□□□ -0.95
ERBB2-206ENST00000578373 J3QLI3 93 aa9.11□□□□□ -0.95
ERBB2-206ENST00000578373 ANGP03950 147 aaKnown RBP9.11□□□□□ -0.95
ERBB2-206ENST00000578373 ZFAND3Q9H8U3 227 aa9.11□□□□□ -0.95
ERBB2-206ENST00000578373 ANKRD17O75179 2603 aaKnown RBP9.11□□□□□ -0.95
ERBB2-206ENST00000578373 RBX1P62877 108 aa9.11□□□□□ -0.95
ERBB2-206ENST00000578373 ANKRD29Q8N6D5 301 aa9.11□□□□□ -0.95
ERBB2-206ENST00000578373 CLEC2BQ92478 149 aa9.11□□□□□ -0.95
ERBB2-206ENST00000578373 G3V4G9 280 aa9.1□□□□□ -0.95
ERBB2-206ENST00000578373 PRR9Q5T870 116 aa9.1□□□□□ -0.95
ERBB2-206ENST00000578373 Q6ZS46 218 aa9.1□□□□□ -0.95
ERBB2-206ENST00000578373 CCL24O00175 119 aa9.1□□□□□ -0.95
ERBB2-206ENST00000578373 FBXL19-AS1Q494R0 122 aa9.1□□□□□ -0.95
ERBB2-206ENST00000578373 DNAJC30Q96LL9 226 aa9.1□□□□□ -0.95
ERBB2-206ENST00000578373 EXPH5Q8NEV8 1989 aa9.1□□□□□ -0.95
ERBB2-206ENST00000578373 REV3LO60673 3130 aa9.09□□□□□ -0.95
ERBB2-206ENST00000578373 NBEAQ8NFP9 2946 aa9.09□□□□□ -0.95
ERBB2-206ENST00000578373 ZNF561-AS1K7EIQ3 104 aa9.09□□□□□ -0.95
ERBB2-206ENST00000578373 CRYBA4P53673 196 aa9.09□□□□□ -0.95
ERBB2-206ENST00000578373 HERVK_113P63121 156 aa9.09□□□□□ -0.95
ERBB2-206ENST00000578373 TEN1Q86WV5 123 aa9.09□□□□□ -0.95
ERBB2-206ENST00000578373 A0A0J9YX75 114 aa9.09□□□□□ -0.95
ERBB2-206ENST00000578373 FOXI1Q12951 378 aa9.09□□□□□ -0.95
ERBB2-206ENST00000578373 PROK1P58294 105 aa9.08□□□□□ -0.96
ERBB2-206ENST00000578373 ZFAND2AQ8N6M9 145 aa9.08□□□□□ -0.96
ERBB2-206ENST00000578373 DEFB4AO15263 64 aa9.08□□□□□ -0.96
ERBB2-206ENST00000578373 LINC01620Q4KN68 170 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms