RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 C1orf158Q8N1D5 194 aa7.31□□□□□ -1.24
SS18-207ENST00000577636 TMEM263Q8WUH6 116 aaKnown RBP7.31□□□□□ -1.24
SS18-207ENST00000577636 PHLDA1Q8WV24 401 aaPredicted RBP7.31□□□□□ -1.24
SS18-207ENST00000577636 C16orf74Q96GX8 76 aa7.31□□□□□ -1.24
SS18-207ENST00000577636 IGHV1-24A0A0C4DH33 117 aa7.3□□□□□ -1.24
SS18-207ENST00000577636 C20orf202A1L168 122 aa7.3□□□□□ -1.24
SS18-207ENST00000577636 K7EMI3 77 aa7.3□□□□□ -1.24
SS18-207ENST00000577636 RHODO00212 210 aa7.3□□□□□ -1.24
SS18-207ENST00000577636 G0S2P27469 103 aa7.3□□□□□ -1.24
SS18-207ENST00000577636 DEFB135Q30KP9 77 aa7.3□□□□□ -1.24
SS18-207ENST00000577636 PYY3Q5JQD4 70 aa7.3□□□□□ -1.24
SS18-207ENST00000577636 POM121L12Q8N7R1 296 aa7.3□□□□□ -1.24
SS18-207ENST00000577636 Q8N8P6 123 aa7.3□□□□□ -1.24
SS18-207ENST00000577636 ST20Q9HBF5 79 aa7.3□□□□□ -1.24
SS18-207ENST00000577636 NIT2Q9NQR4 276 aa7.3□□□□□ -1.24
SS18-207ENST00000577636 KIR2DL5BA0A0G2JN68 375 aa7.29□□□□□ -1.24
SS18-207ENST00000577636 KIR2DL5BA0A0G2JPC4 375 aa7.29□□□□□ -1.24
SS18-207ENST00000577636 PRSS47A8MTI9 375 aa7.29□□□□□ -1.24
SS18-207ENST00000577636 HBDP02042 147 aa7.29□□□□□ -1.24
SS18-207ENST00000577636 BTF3P20290 206 aaKnown RBP7.29□□□□□ -1.24
SS18-207ENST00000577636 SUMO2P61956 95 aaKnown RBP7.29□□□□□ -1.24
SS18-207ENST00000577636 LGALS9CQ6DKI2 356 aa7.29□□□□□ -1.24
SS18-207ENST00000577636 Q6ZWC4 215 aa7.29□□□□□ -1.24
SS18-207ENST00000577636 KIR2DL5AQ8N109 375 aa7.29□□□□□ -1.24
SS18-207ENST00000577636 NRACQ8N912 160 aa7.29□□□□□ -1.24
SS18-207ENST00000577636 KIR2DL5BQ8NHK3 375 aa7.29□□□□□ -1.24
SS18-207ENST00000577636 URB1-AS1Q96HZ7 61 aa7.29□□□□□ -1.24
SS18-207ENST00000577636 MAP1LC3CQ9BXW4 147 aa7.29□□□□□ -1.24
SS18-207ENST00000577636 KIF25-AS1Q9Y6Z4 181 aa7.29□□□□□ -1.24
SS18-207ENST00000577636 TCAPO15273 167 aa7.28□□□□□ -1.24
SS18-207ENST00000577636 AZU1P20160 251 aa7.28□□□□□ -1.24
SS18-207ENST00000577636 LAGE3Q14657 143 aa7.28□□□□□ -1.24
SS18-207ENST00000577636 PMCHL1Q16048 86 aa7.28□□□□□ -1.24
SS18-207ENST00000577636 LGALS9BQ3B8N2 356 aa7.28□□□□□ -1.24
SS18-207ENST00000577636 ORMDL2Q53FV1 153 aa7.28□□□□□ -1.24
SS18-207ENST00000577636 SUMO4Q6EEV6 95 aa7.28□□□□□ -1.24
SS18-207ENST00000577636 C11orf72Q8NBR9 251 aa7.28□□□□□ -1.24
SS18-207ENST00000577636 RASL10AQ92737 203 aa7.28□□□□□ -1.24
SS18-207ENST00000577636 TMEM70Q9BUB7 260 aa7.28□□□□□ -1.24
SS18-207ENST00000577636 SMIM2Q9BVW6 85 aa7.28□□□□□ -1.24
SS18-207ENST00000577636 JPT2Q9H910 190 aa7.28□□□□□ -1.24
SS18-207ENST00000577636 HECTD4Q9Y4D8 3996 aa7.27□□□□□ -1.24
SS18-207ENST00000577636 TRGV1A0A0A0MS02 117 aa7.27□□□□□ -1.25
SS18-207ENST00000577636 SMIM9A6NGZ8 99 aa7.27□□□□□ -1.25
SS18-207ENST00000577636 LINC01549A6NIU2 74 aa7.27□□□□□ -1.25
SS18-207ENST00000577636 VCYO14598 125 aa7.27□□□□□ -1.25
SS18-207ENST00000577636 CIDEAO60543 219 aa7.27□□□□□ -1.25
SS18-207ENST00000577636 CRYGDP07320 174 aa7.27□□□□□ -1.25
SS18-207ENST00000577636 GATA1P15976 413 aaPredicted RBP7.27□□□□□ -1.25
SS18-207ENST00000577636 FCER1GP30273 86 aa7.27□□□□□ -1.25
SS18-207ENST00000577636 RPL32P62910 135 aaKnown RBP7.27□□□□□ -1.25
SS18-207ENST00000577636 ZFP2Q6ZN57 461 aa7.27□□□□□ -1.25
SS18-207ENST00000577636 ZNF705AQ6ZN79 300 aaPredicted RBP7.27□□□□□ -1.25
SS18-207ENST00000577636 OR4C5Q8NGB2 326 aa7.27□□□□□ -1.25
SS18-207ENST00000577636 RNASE8Q8TDE3 154 aaKnown RBP7.27□□□□□ -1.25
SS18-207ENST00000577636 KIR2DL4Q99706 377 aa7.27□□□□□ -1.25
SS18-207ENST00000577636 MRPL16Q9NX20 251 aaKnown RBP7.27□□□□□ -1.25
SS18-207ENST00000577636 LINC01546A6NGU7 62 aa7.26□□□□□ -1.25
SS18-207ENST00000577636 GAS8-AS1O95177 125 aa7.26□□□□□ -1.25
SS18-207ENST00000577636 NUDT3O95989 172 aa7.26□□□□□ -1.25
SS18-207ENST00000577636 GIG44P09565 113 aaPredicted RBP7.26□□□□□ -1.25
SS18-207ENST00000577636 C3orf79P0CE67 100 aa7.26□□□□□ -1.25
SS18-207ENST00000577636 LINC00315P59091 139 aa7.26□□□□□ -1.25
SS18-207ENST00000577636 NANOS2P60321 138 aaKnown RBP7.26□□□□□ -1.25
SS18-207ENST00000577636 DAZ2Q13117 558 aaKnown RBP7.26□□□□□ -1.25
SS18-207ENST00000577636 CFAP126Q5VTH2 177 aa7.26□□□□□ -1.25
SS18-207ENST00000577636 CSNK1G2-AS1Q8NCQ2 148 aa7.26□□□□□ -1.25
SS18-207ENST00000577636 RPL39LQ96EH5 51 aaKnown RBP7.26□□□□□ -1.25
SS18-207ENST00000577636 TP53TG1Q9Y2A0 90 aa7.26□□□□□ -1.25
SS18-207ENST00000577636 TRGV2A0A075B6R0 118 aa7.25□□□□□ -1.25
SS18-207ENST00000577636 TRBV6-5A0A0K0K1A5 114 aa7.25□□□□□ -1.25
SS18-207ENST00000577636 M0QY20 66 aa7.25□□□□□ -1.25
SS18-207ENST00000577636 RS1O15537 224 aa7.25□□□□□ -1.25
SS18-207ENST00000577636 PET117Q6UWS5 81 aa7.25□□□□□ -1.25
SS18-207ENST00000577636 RNF183Q96D59 192 aa7.25□□□□□ -1.25
SS18-207ENST00000577636 NOP10Q9NPE3 64 aaKnown RBP7.25□□□□□ -1.25
SS18-207ENST00000577636 TNFRSF18Q9Y5U5 241 aa7.25□□□□□ -1.25
SS18-207ENST00000577636 DNAH10Q8IVF4 4471 aa7.25□□□□□ -1.25
SS18-207ENST00000577636 IGHV3-73A0A0B4J1V6 119 aa7.24□□□□□ -1.25
SS18-207ENST00000577636 SDHAF1A6NFY7 115 aa7.24□□□□□ -1.25
SS18-207ENST00000577636 TSTD3H0UI37 97 aa7.24□□□□□ -1.25
SS18-207ENST00000577636 SYS1-DBNDD2H3BUS1 97 aa7.24□□□□□ -1.25
SS18-207ENST00000577636 ATP5LO75964 103 aa7.24□□□□□ -1.25
SS18-207ENST00000577636 PRM2P04554 102 aa7.24□□□□□ -1.25
SS18-207ENST00000577636 DNAJC30Q96LL9 226 aa7.24□□□□□ -1.25
SS18-207ENST00000577636 PCLOQ9Y6V0 5065 aa7.24□□□□□ -1.25
SS18-207ENST00000577636 IGLV2-18A0A075B6J9 118 aa7.23□□□□□ -1.25
SS18-207ENST00000577636 TRAV4A0A0B4J268 109 aa7.23□□□□□ -1.25
SS18-207ENST00000577636 H0Y8G0 127 aa7.23□□□□□ -1.25
SS18-207ENST00000577636 C11orf45Q8TAV5 145 aa7.23□□□□□ -1.25
SS18-207ENST00000577636 VAMP8Q9BV40 100 aa7.23□□□□□ -1.25
SS18-207ENST00000577636 TRBV27A0A0K0K1C4 114 aa7.22□□□□□ -1.25
SS18-207ENST00000577636 GAGE12BA1L429 117 aa7.22□□□□□ -1.25
SS18-207ENST00000577636 PCP4L1A6NKN8 68 aa7.22□□□□□ -1.25
SS18-207ENST00000577636 IGLL5B9A064 214 aa7.22□□□□□ -1.25
SS18-207ENST00000577636 HSBP1L1C9JCN9 74 aa7.22□□□□□ -1.25
SS18-207ENST00000577636 I3L3M4 83 aa7.22□□□□□ -1.25
SS18-207ENST00000577636 DEFB4AO15263 64 aa7.22□□□□□ -1.25
SS18-207ENST00000577636 GAGE7O76087 117 aa7.22□□□□□ -1.25
SS18-207ENST00000577636 IGHV3-53P01767 116 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms