RNA–Protein interactions for RNA: ENST00000565848.1

NR4A1-221, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 2

Gene NR4A1, Length 691 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-221ENST00000565848 SMIM17P0DL12 118 aa8.66□□□□□ -1.02
NR4A1-221ENST00000565848 MRPL51Q4U2R6 128 aaKnown RBP8.66□□□□□ -1.02
NR4A1-221ENST00000565848 PHLDA1Q8WV24 401 aaPredicted RBP8.66□□□□□ -1.02
NR4A1-221ENST00000565848 MRAP2Q96G30 205 aa8.66□□□□□ -1.02
NR4A1-221ENST00000565848 Q9UF83 564 aa8.66□□□□□ -1.02
NR4A1-221ENST00000565848 HHLA3Q9XRX5 114 aa8.66□□□□□ -1.02
NR4A1-221ENST00000565848 TRGV4A0A0C4DH28 118 aa8.65□□□□□ -1.02
NR4A1-221ENST00000565848 TRBV10-1A0A0K0K1A3 114 aa8.65□□□□□ -1.02
NR4A1-221ENST00000565848 K7EQD1 137 aa8.65□□□□□ -1.02
NR4A1-221ENST00000565848 PHOX2AO14813 284 aa8.65□□□□□ -1.02
NR4A1-221ENST00000565848 GAS8-AS1O95177 125 aa8.65□□□□□ -1.02
NR4A1-221ENST00000565848 LY6G6CO95867 125 aa8.65□□□□□ -1.02
NR4A1-221ENST00000565848 TRAV26-2A0A0B4J265 109 aa8.64□□□□□ -1.03
NR4A1-221ENST00000565848 TRBV6-5A0A0K0K1A5 114 aa8.64□□□□□ -1.03
NR4A1-221ENST00000565848 F5H768 121 aa8.64□□□□□ -1.03
NR4A1-221ENST00000565848 MGPP08493 103 aa8.64□□□□□ -1.03
NR4A1-221ENST00000565848 RHOHQ15669 191 aa8.64□□□□□ -1.03
NR4A1-221ENST00000565848 ZNF56Q15929 161 aa8.64□□□□□ -1.03
NR4A1-221ENST00000565848 NRACQ8N912 160 aa8.64□□□□□ -1.03
NR4A1-221ENST00000565848 TRAV26-1A0A087WT03 109 aa8.63□□□□□ -1.03
NR4A1-221ENST00000565848 PPBPP02775 128 aa8.63□□□□□ -1.03
NR4A1-221ENST00000565848 P0DMU3 169 aa8.63□□□□□ -1.03
NR4A1-221ENST00000565848 FAM231AP0DMU4 169 aa8.63□□□□□ -1.03
NR4A1-221ENST00000565848 FAM231CP0DMU5 169 aa8.63□□□□□ -1.03
NR4A1-221ENST00000565848 RAB5AP20339 215 aa8.63□□□□□ -1.03
NR4A1-221ENST00000565848 RPS10P46783 165 aaKnown RBP8.63□□□□□ -1.03
NR4A1-221ENST00000565848 CEMP1Q6PRD7 247 aaPredicted RBP8.63□□□□□ -1.03
NR4A1-221ENST00000565848 NEXN-AS1Q8NBZ9 246 aa8.63□□□□□ -1.03
NR4A1-221ENST00000565848 ALMS1Q8TCU4 4167 aa8.62□□□□□ -1.03
NR4A1-221ENST00000565848 LOC100131303A0A0U1RQF7 123 aa8.62□□□□□ -1.03
NR4A1-221ENST00000565848 PRSS47A8MTI9 375 aa8.62□□□□□ -1.03
NR4A1-221ENST00000565848 HTN3P15516 51 aa8.62□□□□□ -1.03
NR4A1-221ENST00000565848 DNAJC30Q96LL9 226 aa8.62□□□□□ -1.03
NR4A1-221ENST00000565848 MRPL18Q9H0U6 180 aaKnown RBP8.62□□□□□ -1.03
NR4A1-221ENST00000565848 NIT2Q9NQR4 276 aa8.62□□□□□ -1.03
NR4A1-221ENST00000565848 KIAA1109Q2LD37 5005 aa8.61□□□□□ -1.03
NR4A1-221ENST00000565848 A0A096LPF7 62 aa8.61□□□□□ -1.03
NR4A1-221ENST00000565848 NUPR2A6NF83 97 aa8.61□□□□□ -1.03
NR4A1-221ENST00000565848 D6R8Y8 96 aa8.61□□□□□ -1.03
NR4A1-221ENST00000565848 F5H697 171 aa8.61□□□□□ -1.03
NR4A1-221ENST00000565848 H7C1H1 209 aa8.61□□□□□ -1.03
NR4A1-221ENST00000565848 PAX4O43316 350 aa8.61□□□□□ -1.03
NR4A1-221ENST00000565848 APCSP02743 223 aa8.61□□□□□ -1.03
NR4A1-221ENST00000565848 RPL39LQ96EH5 51 aaKnown RBP8.61□□□□□ -1.03
NR4A1-221ENST00000565848 PRADC1Q9BSG0 188 aa8.61□□□□□ -1.03
NR4A1-221ENST00000565848 LAMTOR2Q9Y2Q5 125 aa8.61□□□□□ -1.03
NR4A1-221ENST00000565848 TRBV7-3A0A075B6L6 115 aa8.6□□□□□ -1.03
NR4A1-221ENST00000565848 A0A0J9YY99 117 aa8.6□□□□□ -1.03
NR4A1-221ENST00000565848 SMKR1H3BMG3 65 aa8.6□□□□□ -1.03
NR4A1-221ENST00000565848 NCR2O95944 276 aa8.6□□□□□ -1.03
NR4A1-221ENST00000565848 POLR2KP53803 58 aaKnown RBP8.6□□□□□ -1.03
NR4A1-221ENST00000565848 UBE2D3P61077 147 aa8.6□□□□□ -1.03
NR4A1-221ENST00000565848 UBE2D2P62837 147 aa8.6□□□□□ -1.03
NR4A1-221ENST00000565848 RPL32P62910 135 aaKnown RBP8.6□□□□□ -1.03
NR4A1-221ENST00000565848 ORMDL3Q8N138 153 aa8.6□□□□□ -1.03
NR4A1-221ENST00000565848 C15orf53Q8NAA6 179 aa8.6□□□□□ -1.03
NR4A1-221ENST00000565848 ALKBH7Q9BT30 221 aaPredicted RBP8.6□□□□□ -1.03
NR4A1-221ENST00000565848 APLNQ9ULZ1 77 aa8.6□□□□□ -1.03
NR4A1-221ENST00000565848 TRAPPC1Q9Y5R8 145 aa8.6□□□□□ -1.03
NR4A1-221ENST00000565848 TNFRSF6BO95407 300 aa8.59□□□□□ -1.03
NR4A1-221ENST00000565848 NPYP01303 97 aa8.59□□□□□ -1.03
NR4A1-221ENST00000565848 GYPEP15421 78 aa8.59□□□□□ -1.03
NR4A1-221ENST00000565848 CKS2P33552 79 aa8.59□□□□□ -1.03
NR4A1-221ENST00000565848 FABP9Q0Z7S8 132 aa8.59□□□□□ -1.03
NR4A1-221ENST00000565848 LINC00476Q8WZB0 136 aa8.59□□□□□ -1.03
NR4A1-221ENST00000565848 C20orf78Q9BR46 151 aa8.59□□□□□ -1.03
NR4A1-221ENST00000565848 IGLV2-18A0A075B6J9 118 aa8.58□□□□□ -1.04
NR4A1-221ENST00000565848 TRBV27A0A0K0K1C4 114 aa8.58□□□□□ -1.04
NR4A1-221ENST00000565848 PPP1R17O96001 155 aa8.58□□□□□ -1.04
NR4A1-221ENST00000565848 TRGC2P03986 189 aa8.58□□□□□ -1.04
NR4A1-221ENST00000565848 TCTAP57738 103 aa8.58□□□□□ -1.04
NR4A1-221ENST00000565848 RPL36AP83881 106 aaKnown RBP8.58□□□□□ -1.04
NR4A1-221ENST00000565848 MRPL23Q16540 153 aaKnown RBP8.58□□□□□ -1.04
NR4A1-221ENST00000565848 KIAA1644Q3SXP7 199 aa8.58□□□□□ -1.04
NR4A1-221ENST00000565848 RPL36ALQ969Q0 106 aaKnown RBP8.58□□□□□ -1.04
NR4A1-221ENST00000565848 PRELID3AQ96N28 172 aa8.58□□□□□ -1.04
NR4A1-221ENST00000565848 TMEM70Q9BUB7 260 aa8.58□□□□□ -1.04
NR4A1-221ENST00000565848 ICOSQ9Y6W8 199 aa8.58□□□□□ -1.04
NR4A1-221ENST00000565848 FRAS1Q86XX4 4008 aa8.58□□□□□ -1.04
NR4A1-221ENST00000565848 GAGE12JA6NER3 117 aa8.57□□□□□ -1.04
NR4A1-221ENST00000565848 TIRAPP58753 221 aa8.57□□□□□ -1.04
NR4A1-221ENST00000565848 GAGE1Q13065 139 aa8.57□□□□□ -1.04
NR4A1-221ENST00000565848 GAGE4Q13068 117 aa8.57□□□□□ -1.04
NR4A1-221ENST00000565848 GAGE5Q13069 117 aa8.57□□□□□ -1.04
NR4A1-221ENST00000565848 GAGE13Q4V321 117 aa8.57□□□□□ -1.04
NR4A1-221ENST00000565848 OR10J3Q5JRS4 329 aa8.57□□□□□ -1.04
NR4A1-221ENST00000565848 SH2D6Q7Z4S9 175 aa8.57□□□□□ -1.04
NR4A1-221ENST00000565848 ZNRF2Q8NHG8 242 aa8.57□□□□□ -1.04
NR4A1-221ENST00000565848 SDHAF1A6NFY7 115 aa8.56□□□□□ -1.04
NR4A1-221ENST00000565848 IGLL5B9A064 214 aa8.56□□□□□ -1.04
NR4A1-221ENST00000565848 SUMO2P61956 95 aaKnown RBP8.56□□□□□ -1.04
NR4A1-221ENST00000565848 KLK5Q9Y337 293 aaPredicted RBP8.56□□□□□ -1.04
NR4A1-221ENST00000565848 LINC01546A6NGU7 62 aa8.55□□□□□ -1.04
NR4A1-221ENST00000565848 SRIP30626 198 aa8.55□□□□□ -1.04
NR4A1-221ENST00000565848 NTM-AS1Q6ZSK4 140 aa8.55□□□□□ -1.04
NR4A1-221ENST00000565848 NEGR1Q7Z3B1 354 aa8.55□□□□□ -1.04
NR4A1-221ENST00000565848 DAZ4Q86SG3 579 aaKnown RBP8.55□□□□□ -1.04
NR4A1-221ENST00000565848 ATP6V0E2Q8NHE4 81 aa8.55□□□□□ -1.04
NR4A1-221ENST00000565848 SMIM2Q9BVW6 85 aa8.55□□□□□ -1.04
NR4A1-221ENST00000565848 ST20Q9HBF5 79 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms