RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 A0A096LNJ9 63 aa11.81□□□□□ -0.52
TPM1-219ENST00000559397 DEFB4AO15263 64 aa11.81□□□□□ -0.52
TPM1-219ENST00000559397 SUMO2P61956 95 aaKnown RBP11.8□□□□□ -0.52
TPM1-219ENST00000559397 FAM74A4Q5TZK3 123 aa11.8□□□□□ -0.52
TPM1-219ENST00000559397 C11orf68Q9H3H3 251 aaKnown RBP11.8□□□□□ -0.52
TPM1-219ENST00000559397 EDA2RQ9HAV5 297 aa11.8□□□□□ -0.52
TPM1-219ENST00000559397 M0QY20 66 aa11.79□□□□□ -0.52
TPM1-219ENST00000559397 RPL32P62910 135 aaKnown RBP11.79□□□□□ -0.52
TPM1-219ENST00000559397 DAZ2Q13117 558 aaKnown RBP11.79□□□□□ -0.52
TPM1-219ENST00000559397 CDPF1Q6NVV7 123 aa11.79□□□□□ -0.52
TPM1-219ENST00000559397 SMIM2Q9BVW6 85 aa11.79□□□□□ -0.52
TPM1-219ENST00000559397 A0A0J9YWU9 116 aa11.78□□□□□ -0.52
TPM1-219ENST00000559397 TRBV6-5A0A0K0K1A5 114 aa11.78□□□□□ -0.52
TPM1-219ENST00000559397 F5H697 171 aa11.78□□□□□ -0.52
TPM1-219ENST00000559397 RS1O15537 224 aa11.78□□□□□ -0.52
TPM1-219ENST00000559397 LEPROTL1O95214 131 aa11.78□□□□□ -0.52
TPM1-219ENST00000559397 C3orf79P0CE67 100 aa11.78□□□□□ -0.52
TPM1-219ENST00000559397 CFAP126Q5VTH2 177 aa11.78□□□□□ -0.52
TPM1-219ENST00000559397 NIT2Q9NQR4 276 aa11.78□□□□□ -0.52
TPM1-219ENST00000559397 MRPL16Q9NX20 251 aaKnown RBP11.78□□□□□ -0.52
TPM1-219ENST00000559397 NACAE9PAV3 2078 aa11.78□□□□□ -0.52
TPM1-219ENST00000559397 EMP1P54849 157 aa11.78□□□□□ -0.52
TPM1-219ENST00000559397 KRTDAPP60985 99 aa11.78□□□□□ -0.52
TPM1-219ENST00000559397 ZNF56Q15929 161 aa11.78□□□□□ -0.52
TPM1-219ENST00000559397 LGALS9BQ3B8N2 356 aa11.78□□□□□ -0.52
TPM1-219ENST00000559397 Q8N976 141 aa11.78□□□□□ -0.52
TPM1-219ENST00000559397 DYNC2H1Q8NCM8 4307 aaKnown RBP11.77□□□□□ -0.53
TPM1-219ENST00000559397 RHODO00212 210 aa11.77□□□□□ -0.53
TPM1-219ENST00000559397 HBDP02042 147 aa11.77□□□□□ -0.53
TPM1-219ENST00000559397 POLR2KP53803 58 aaKnown RBP11.76□□□□□ -0.53
TPM1-219ENST00000559397 LINC00173Q6ZV60 143 aa11.76□□□□□ -0.53
TPM1-219ENST00000559397 ST20Q9HBF5 79 aa11.76□□□□□ -0.53
TPM1-219ENST00000559397 NOP10Q9NPE3 64 aaKnown RBP11.76□□□□□ -0.53
TPM1-219ENST00000559397 HSPB8Q9UJY1 196 aa11.76□□□□□ -0.53
TPM1-219ENST00000559397 K7EMI3 77 aa11.75□□□□□ -0.53
TPM1-219ENST00000559397 SCGB1D1O95968 90 aa11.75□□□□□ -0.53
TPM1-219ENST00000559397 FCER1GP30273 86 aa11.75□□□□□ -0.53
TPM1-219ENST00000559397 ZFP2Q6ZN57 461 aa11.75□□□□□ -0.53
TPM1-219ENST00000559397 DKK2Q9UBU2 259 aa11.75□□□□□ -0.53
TPM1-219ENST00000559397 CELA1Q9UNI1 258 aa11.75□□□□□ -0.53
TPM1-219ENST00000559397 LAGE3Q14657 143 aa11.75□□□□□ -0.53
TPM1-219ENST00000559397 FAM222AQ5U5X8 452 aa11.75□□□□□ -0.53
TPM1-219ENST00000559397 TMEM70Q9BUB7 260 aa11.75□□□□□ -0.53
TPM1-219ENST00000559397 TRGV1A0A0A0MS02 117 aa11.74□□□□□ -0.53
TPM1-219ENST00000559397 BTF3P20290 206 aaKnown RBP11.74□□□□□ -0.53
TPM1-219ENST00000559397 Q6ZTI0 123 aa11.74□□□□□ -0.53
TPM1-219ENST00000559397 LYRM9A8MSI8 78 aa11.73□□□□□ -0.53
TPM1-219ENST00000559397 H7C1H1 209 aa11.73□□□□□ -0.53
TPM1-219ENST00000559397 TCAPO15273 167 aa11.73□□□□□ -0.53
TPM1-219ENST00000559397 STAB2Q8WWQ8 2551 aa11.73□□□□□ -0.53
TPM1-219ENST00000559397 TRBV27A0A0K0K1C4 114 aa11.72□□□□□ -0.53
TPM1-219ENST00000559397 VCYO14598 125 aa11.72□□□□□ -0.53
TPM1-219ENST00000559397 IGHV3-53P01767 116 aa11.72□□□□□ -0.53
TPM1-219ENST00000559397 SPART-AS1P0CW21 52 aa11.72□□□□□ -0.53
TPM1-219ENST00000559397 Q6ZSN1 163 aa11.72□□□□□ -0.53
TPM1-219ENST00000559397 LINC00612Q8N6U2 182 aa11.72□□□□□ -0.53
TPM1-219ENST00000559397 TGP01266 2768 aa11.72□□□□□ -0.53
TPM1-219ENST00000559397 IGHV3-73A0A0B4J1V6 119 aa11.71□□□□□ -0.53
TPM1-219ENST00000559397 TRAV4A0A0B4J268 109 aa11.71□□□□□ -0.53
TPM1-219ENST00000559397 SDHAF1A6NFY7 115 aa11.71□□□□□ -0.53
TPM1-219ENST00000559397 SYS1-DBNDD2H3BUS1 97 aa11.71□□□□□ -0.53
TPM1-219ENST00000559397 ORMDL2Q53FV1 153 aa11.71□□□□□ -0.53
TPM1-219ENST00000559397 MAP1LC3CQ9BXW4 147 aa11.71□□□□□ -0.53
TPM1-219ENST00000559397 SPATA12Q7Z6I5 190 aa11.71□□□□□ -0.54
TPM1-219ENST00000559397 OR4C5Q8NGB2 326 aa11.71□□□□□ -0.54
TPM1-219ENST00000559397 PET117Q6UWS5 81 aa11.7□□□□□ -0.54
TPM1-219ENST00000559397 TEX43Q6ZNM6 134 aa11.7□□□□□ -0.54
TPM1-219ENST00000559397 TEX48A0A1B0GUV7 120 aa11.69□□□□□ -0.54
TPM1-219ENST00000559397 C12orf74Q32Q52 190 aa11.69□□□□□ -0.54
TPM1-219ENST00000559397 C11orf45Q8TAV5 145 aa11.69□□□□□ -0.54
TPM1-219ENST00000559397 GAGE12BA1L429 117 aa11.68□□□□□ -0.54
TPM1-219ENST00000559397 CIDEAO60543 219 aa11.68□□□□□ -0.54
TPM1-219ENST00000559397 GAGE7O76087 117 aa11.68□□□□□ -0.54
TPM1-219ENST00000559397 GAGE12FP0CL80 117 aa11.68□□□□□ -0.54
TPM1-219ENST00000559397 GAGE12GP0CL81 117 aa11.68□□□□□ -0.54
TPM1-219ENST00000559397 GAGE12IP0CL82 117 aa11.68□□□□□ -0.54
TPM1-219ENST00000559397 NEGR1Q7Z3B1 354 aa11.68□□□□□ -0.54
TPM1-219ENST00000559397 ZNF479Q96JC4 524 aa11.68□□□□□ -0.54
TPM1-219ENST00000559397 NUDT3O95989 172 aa11.68□□□□□ -0.54
TPM1-219ENST00000559397 P0DMU3 169 aa11.68□□□□□ -0.54
TPM1-219ENST00000559397 FAM231AP0DMU4 169 aa11.68□□□□□ -0.54
TPM1-219ENST00000559397 FAM231CP0DMU5 169 aa11.68□□□□□ -0.54
TPM1-219ENST00000559397 DEFB130BP0DP73 79 aa11.68□□□□□ -0.54
TPM1-219ENST00000559397 DEFB130AP0DP74 79 aa11.68□□□□□ -0.54
TPM1-219ENST00000559397 S100A12P80511 92 aa11.68□□□□□ -0.54
TPM1-219ENST00000559397 IFI27L1Q96BM0 104 aa11.68□□□□□ -0.54
TPM1-219ENST00000559397 DNAJC30Q96LL9 226 aa11.68□□□□□ -0.54
TPM1-219ENST00000559397 C18orf15Q96N68 181 aa11.68□□□□□ -0.54
TPM1-219ENST00000559397 NANOS2P60321 138 aaKnown RBP11.67□□□□□ -0.54
TPM1-219ENST00000559397 KIR2DL4Q99706 377 aa11.67□□□□□ -0.54
TPM1-219ENST00000559397 CSMD3Q7Z407 3707 aa11.67□□□□□ -0.54
TPM1-219ENST00000559397 STARD9Q9P2P6 4700 aa11.66□□□□□ -0.54
TPM1-219ENST00000559397 PLECQ15149 4684 aaKnown RBP11.66□□□□□ -0.54
TPM1-219ENST00000559397 DAD1P61803 113 aa11.66□□□□□ -0.54
TPM1-219ENST00000559397 LINC01545Q5VT33 79 aa11.66□□□□□ -0.54
TPM1-219ENST00000559397 NEXN-AS1Q8NBZ9 246 aa11.66□□□□□ -0.54
TPM1-219ENST00000559397 TOMM6Q96B49 74 aa11.66□□□□□ -0.54
TPM1-219ENST00000559397 Q9UF83 564 aa11.66□□□□□ -0.54
TPM1-219ENST00000559397 TRGV2A0A075B6R0 118 aa11.65□□□□□ -0.55
TPM1-219ENST00000559397 C20orf202A1L168 122 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms