RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 TMEM223A0PJW6 202 aa12.21□□□□□ -0.45
SPG11-215ENST00000559193 RBMY1A1P0DJD3 496 aaKnown RBP12.21□□□□□ -0.45
SPG11-215ENST00000559193 RBMY1CP0DJD4 496 aa12.21□□□□□ -0.45
SPG11-215ENST00000559193 RBMY1FQ15415 496 aaKnown RBP12.21□□□□□ -0.45
SPG11-215ENST00000559193 I3L3M4 83 aa12.21□□□□□ -0.46
SPG11-215ENST00000559193 RNF152Q8N8N0 203 aa12.21□□□□□ -0.46
SPG11-215ENST00000559193 HOXD3P31249 432 aaPredicted RBP12.2□□□□□ -0.46
SPG11-215ENST00000559193 LINC01356Q8N9X3 169 aa12.2□□□□□ -0.46
SPG11-215ENST00000559193 DOPEY1Q5JWR5 2465 aa12.2□□□□□ -0.46
SPG11-215ENST00000559193 LEPROTO15243 131 aa12.2□□□□□ -0.46
SPG11-215ENST00000559193 ZNF22P17026 224 aaPredicted RBP12.2□□□□□ -0.46
SPG11-215ENST00000559193 DSCR9P59020 149 aa12.2□□□□□ -0.46
SPG11-215ENST00000559193 C1QTNF4Q9BXJ3 329 aa12.2□□□□□ -0.46
SPG11-215ENST00000559193 IGLV4-3A0A075B6K6 122 aa12.19□□□□□ -0.46
SPG11-215ENST00000559193 TRGV11A0A075B6L2 103 aa12.19□□□□□ -0.46
SPG11-215ENST00000559193 A0A096LNT2 108 aa12.19□□□□□ -0.46
SPG11-215ENST00000559193 SMAGPQ0VAQ4 97 aa12.19□□□□□ -0.46
SPG11-215ENST00000559193 C10orf126Q8N4M7 172 aa12.18□□□□□ -0.46
SPG11-215ENST00000559193 ATP6V0E2Q8NHE4 81 aa12.18□□□□□ -0.46
SPG11-215ENST00000559193 IGHV3-64A0A075B6Q5 118 aa12.18□□□□□ -0.46
SPG11-215ENST00000559193 A0A0J9YXV3 536 aa12.18□□□□□ -0.46
SPG11-215ENST00000559193 RHODO00212 210 aa12.18□□□□□ -0.46
SPG11-215ENST00000559193 TCL1BO95988 128 aa12.18□□□□□ -0.46
SPG11-215ENST00000559193 FOXI1Q12951 378 aa12.18□□□□□ -0.46
SPG11-215ENST00000559193 MAPK1IP1LQ8NDC0 245 aa12.18□□□□□ -0.46
SPG11-215ENST00000559193 ELANEP08246 267 aa12.17□□□□□ -0.46
SPG11-215ENST00000559193 LYRM7Q5U5X0 104 aa12.17□□□□□ -0.46
SPG11-215ENST00000559193 ZNF702PQ9H963 129 aa12.17□□□□□ -0.46
SPG11-215ENST00000559193 VPREB3Q9UKI3 123 aa12.17□□□□□ -0.46
SPG11-215ENST00000559193 CRYBG3Q68DQ2 2970 aa12.17□□□□□ -0.46
SPG11-215ENST00000559193 KNCNA6PVL3 124 aa12.17□□□□□ -0.46
SPG11-215ENST00000559193 SCGB1A1P11684 91 aa12.17□□□□□ -0.46
SPG11-215ENST00000559193 ZNF418Q8TF45 676 aaPredicted RBP12.17□□□□□ -0.46
SPG11-215ENST00000559193 USP9XQ93008 2570 aaPredicted RBP12.16□□□□□ -0.46
SPG11-215ENST00000559193 DOPEY2Q9Y3R5 2298 aa12.16□□□□□ -0.46
SPG11-215ENST00000559193 EIF4EBP3O60516 100 aaPredicted RBP12.16□□□□□ -0.46
SPG11-215ENST00000559193 PRO1854Q9UHT4 67 aa12.16□□□□□ -0.46
SPG11-215ENST00000559193 FLNCQ14315 2725 aa12.16□□□□□ -0.46
SPG11-215ENST00000559193 CSMD2Q7Z408 3487 aa12.16□□□□□ -0.46
SPG11-215ENST00000559193 IGHV3-73A0A0B4J1V6 119 aa12.16□□□□□ -0.46
SPG11-215ENST00000559193 TGFAP01135 160 aa12.16□□□□□ -0.46
SPG11-215ENST00000559193 PROK1P58294 105 aa12.16□□□□□ -0.46
SPG11-215ENST00000559193 TCTEX1D4Q5JR98 221 aa12.16□□□□□ -0.46
SPG11-215ENST00000559193 FAM104AQ969W3 186 aa12.16□□□□□ -0.46
SPG11-215ENST00000559193 UBE2E2Q96LR5 201 aa12.16□□□□□ -0.46
SPG11-215ENST00000559193 VCX2Q9H322 139 aa12.16□□□□□ -0.46
SPG11-215ENST00000559193 HTN1P15515 57 aa12.15□□□□□ -0.46
SPG11-215ENST00000559193 PTH2Q96A98 100 aa12.15□□□□□ -0.46
SPG11-215ENST00000559193 EDA2RQ9HAV5 297 aa12.15□□□□□ -0.46
SPG11-215ENST00000559193 A4D1N5 150 aa12.15□□□□□ -0.47
SPG11-215ENST00000559193 J3QLI3 93 aa12.15□□□□□ -0.47
SPG11-215ENST00000559193 CIDEAO60543 219 aa12.15□□□□□ -0.47
SPG11-215ENST00000559193 C18orf65Q6ZTR6 163 aa12.14□□□□□ -0.47
SPG11-215ENST00000559193 TRBV20-1A0A075B6N2 111 aa12.13□□□□□ -0.47
SPG11-215ENST00000559193 RBMY1BA6NDE4 496 aaKnown RBP12.13□□□□□ -0.47
SPG11-215ENST00000559193 RBMY1EA6NEQ0 496 aaKnown RBP12.13□□□□□ -0.47
SPG11-215ENST00000559193 PRM2P04554 102 aa12.13□□□□□ -0.47
SPG11-215ENST00000559193 RBMY1DP0C7P1 496 aaKnown RBP12.13□□□□□ -0.47
SPG11-215ENST00000559193 SLURP1P55000 103 aa12.13□□□□□ -0.47
SPG11-215ENST00000559193 DEFB131AP59861 70 aa12.13□□□□□ -0.47
SPG11-215ENST00000559193 DEFB136Q30KP8 78 aa12.13□□□□□ -0.47
SPG11-215ENST00000559193 SORL1Q92673 2214 aa12.13□□□□□ -0.47
SPG11-215ENST00000559193 TRAV2A0A0B4J234 112 aa12.13□□□□□ -0.47
SPG11-215ENST00000559193 A8MTW9 85 aa12.12□□□□□ -0.47
SPG11-215ENST00000559193 CD28P10747 220 aa12.12□□□□□ -0.47
SPG11-215ENST00000559193 SBSPONQ8IVN8 264 aa12.12□□□□□ -0.47
SPG11-215ENST00000559193 TMEM263Q8WUH6 116 aaKnown RBP12.12□□□□□ -0.47
SPG11-215ENST00000559193 PYGO1Q9Y3Y4 419 aa12.12□□□□□ -0.47
SPG11-215ENST00000559193 CUBNO60494 3623 aa12.12□□□□□ -0.47
SPG11-215ENST00000559193 FSHBP01225 129 aa12.12□□□□□ -0.47
SPG11-215ENST00000559193 CEMP1Q6PRD7 247 aaPredicted RBP12.12□□□□□ -0.47
SPG11-215ENST00000559193 Q6YL49 198 aa12.12□□□□□ -0.47
SPG11-215ENST00000559193 MUSTN1Q8IVN3 82 aa12.11□□□□□ -0.47
SPG11-215ENST00000559193 CARD19Q96LW7 228 aa12.11□□□□□ -0.47
SPG11-215ENST00000559193 Q9UF83 564 aa12.11□□□□□ -0.47
SPG11-215ENST00000559193 H3BMM0 161 aa12.11□□□□□ -0.47
SPG11-215ENST00000559193 M0R2P5 195 aa12.11□□□□□ -0.47
SPG11-215ENST00000559193 IGHV3-33P01772 117 aa12.11□□□□□ -0.47
SPG11-215ENST00000559193 TEN1Q86WV5 123 aa12.11□□□□□ -0.47
SPG11-215ENST00000559193 RAX2Q96IS3 184 aa12.11□□□□□ -0.47
SPG11-215ENST00000559193 A0A0J9YXY3 114 aa12.1□□□□□ -0.47
SPG11-215ENST00000559193 IGHV3-30-3P0DP02 117 aa12.1□□□□□ -0.47
SPG11-215ENST00000559193 FHL3Q13643 280 aa12.1□□□□□ -0.47
SPG11-215ENST00000559193 CDIP1Q9H305 208 aa12.1□□□□□ -0.47
SPG11-215ENST00000559193 BEX4Q9NWD9 120 aaPredicted RBP12.1□□□□□ -0.47
SPG11-215ENST00000559193 UTP20O75691 2785 aaKnown RBP12.1□□□□□ -0.47
SPG11-215ENST00000559193 A0A0B4J2C4 111 aa12.1□□□□□ -0.47
SPG11-215ENST00000559193 SCGB1C2P0DMR2 95 aa12.1□□□□□ -0.47
SPG11-215ENST00000559193 MRPS36P82909 103 aaKnown RBP12.1□□□□□ -0.47
SPG11-215ENST00000559193 Q5PR19 223 aa12.1□□□□□ -0.47
SPG11-215ENST00000559193 Q6ZSN1 163 aa12.1□□□□□ -0.47
SPG11-215ENST00000559193 DUX3Q96PT4 197 aa12.1□□□□□ -0.47
SPG11-215ENST00000559193 SPXQ9BT56 116 aa12.1□□□□□ -0.47
SPG11-215ENST00000559193 RNASE13Q5GAN3 156 aaKnown RBP12.09□□□□□ -0.47
SPG11-215ENST00000559193 ADARB2-AS1A8MUL3 147 aa12.09□□□□□ -0.47
SPG11-215ENST00000559193 PPDPFLQ8WWR9 84 aa12.09□□□□□ -0.47
SPG11-215ENST00000559193 TIMM21Q9BVV7 248 aa12.09□□□□□ -0.47
SPG11-215ENST00000559193 TNFRSF18Q9Y5U5 241 aa12.09□□□□□ -0.47
SPG11-215ENST00000559193 A8MWV9 139 aa12.08□□□□□ -0.48
SPG11-215ENST00000559193 ZANQ9Y493 2812 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms