RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 NDUFA4O00483 81 aa3.32□□□□□ -1.88
ATXN3-241ENST00000556374 ID1P41134 155 aa3.32□□□□□ -1.88
ATXN3-241ENST00000556374 RPL24P83731 157 aaKnown RBP3.32□□□□□ -1.88
ATXN3-241ENST00000556374 RPL36AP83881 106 aaKnown RBP3.32□□□□□ -1.88
ATXN3-241ENST00000556374 UFSP1Q6NVU6 142 aa3.32□□□□□ -1.88
ATXN3-241ENST00000556374 SCGB1D4Q6XE38 83 aa3.32□□□□□ -1.88
ATXN3-241ENST00000556374 ADAMTSL5Q6ZMM2 481 aa3.32□□□□□ -1.88
ATXN3-241ENST00000556374 PCP2Q8IVA1 136 aa3.32□□□□□ -1.88
ATXN3-241ENST00000556374 CEND1Q8N111 149 aa3.32□□□□□ -1.88
ATXN3-241ENST00000556374 USMG5Q96IX5 58 aa3.32□□□□□ -1.88
ATXN3-241ENST00000556374 C20orf78Q9BR46 151 aa3.32□□□□□ -1.88
ATXN3-241ENST00000556374 NAA38Q9BRA0 125 aaKnown RBP3.32□□□□□ -1.88
ATXN3-241ENST00000556374 AGPAT4-IT1Q9H0P7 198 aa3.32□□□□□ -1.88
ATXN3-241ENST00000556374 BEX4Q9NWD9 120 aaPredicted RBP3.32□□□□□ -1.88
ATXN3-241ENST00000556374 MRPL35Q9NZE8 188 aaKnown RBP3.32□□□□□ -1.88
ATXN3-241ENST00000556374 CHTOPQ9Y3Y2 248 aaKnown RBP3.32□□□□□ -1.88
ATXN3-241ENST00000556374 TRBV25-1A0A075B6N4 114 aa3.31□□□□□ -1.88
ATXN3-241ENST00000556374 IGHV3OR16-13A0A075B7E8 117 aa3.31□□□□□ -1.88
ATXN3-241ENST00000556374 IGHV3-74A0A0B4J1X5 117 aa3.31□□□□□ -1.88
ATXN3-241ENST00000556374 TRAV40A0A0B4J280 105 aa3.31□□□□□ -1.88
ATXN3-241ENST00000556374 IGHV1-69DA0A0B4J2H0 117 aa3.31□□□□□ -1.88
ATXN3-241ENST00000556374 IGKV3D-20A0A0C4DH25 116 aa3.31□□□□□ -1.88
ATXN3-241ENST00000556374 IGHV7-4-1A0A0J9YVY3 117 aa3.31□□□□□ -1.88
ATXN3-241ENST00000556374 TRBV7-9A0A0J9YWB2 115 aa3.31□□□□□ -1.88
ATXN3-241ENST00000556374 CENPVL3A0A0U1RRI6 287 aa3.31□□□□□ -1.88
ATXN3-241ENST00000556374 MYMXA0A1B0GTQ4 84 aa3.31□□□□□ -1.88
ATXN3-241ENST00000556374 PRAC2D3DTV9 90 aa3.31□□□□□ -1.88
ATXN3-241ENST00000556374 LINC01619G3V211 115 aa3.31□□□□□ -1.88
ATXN3-241ENST00000556374 J3KRW8 73 aa3.31□□□□□ -1.88
ATXN3-241ENST00000556374 RHODO00212 210 aa3.31□□□□□ -1.88
ATXN3-241ENST00000556374 IGHV1-69P01742 117 aa3.31□□□□□ -1.88
ATXN3-241ENST00000556374 DSCR9P59020 149 aa3.31□□□□□ -1.88
ATXN3-241ENST00000556374 KLK9Q2XQG4 91 aa3.31□□□□□ -1.88
ATXN3-241ENST00000556374 CLEC2AQ6UVW9 174 aa3.31□□□□□ -1.88
ATXN3-241ENST00000556374 FAM159AQ6UWV7 190 aa3.31□□□□□ -1.88
ATXN3-241ENST00000556374 KIR2DL4Q99706 377 aa3.31□□□□□ -1.88
ATXN3-241ENST00000556374 BPESC1Q9GZL8 116 aa3.31□□□□□ -1.88
ATXN3-241ENST00000556374 KLK9Q9UKQ9 250 aa3.31□□□□□ -1.88
ATXN3-241ENST00000556374 CYSLTR1Q9Y271 337 aa3.31□□□□□ -1.88
ATXN3-241ENST00000556374 BIRC6Q9NR09 4857 aa3.31□□□□□ -1.88
ATXN3-241ENST00000556374 WNK1Q9H4A3 2382 aa3.31□□□□□ -1.88
ATXN3-241ENST00000556374 TRAV8-2A0A0B4J237 113 aa3.3□□□□□ -1.88
ATXN3-241ENST00000556374 TRAV26-2A0A0B4J265 109 aa3.3□□□□□ -1.88
ATXN3-241ENST00000556374 CLPSL1A2RUU4 121 aa3.3□□□□□ -1.88
ATXN3-241ENST00000556374 ZNF815PA8K554 130 aa3.3□□□□□ -1.88
ATXN3-241ENST00000556374 F8W1H4 67 aa3.3□□□□□ -1.88
ATXN3-241ENST00000556374 G3V318 75 aa3.3□□□□□ -1.88
ATXN3-241ENST00000556374 K7ERJ3 54 aa3.3□□□□□ -1.88
ATXN3-241ENST00000556374 NDUFS8O00217 210 aa3.3□□□□□ -1.88
ATXN3-241ENST00000556374 GATA1P15976 413 aaPredicted RBP3.3□□□□□ -1.88
ATXN3-241ENST00000556374 CRIP2P52943 208 aaPredicted RBP3.3□□□□□ -1.88
ATXN3-241ENST00000556374 FXYD2P54710 66 aa3.3□□□□□ -1.88
ATXN3-241ENST00000556374 C2orf66Q6UXQ4 117 aa3.3□□□□□ -1.88
ATXN3-241ENST00000556374 NEGR1Q7Z3B1 354 aa3.3□□□□□ -1.88
ATXN3-241ENST00000556374 TMEM219Q86XT9 240 aa3.3□□□□□ -1.88
ATXN3-241ENST00000556374 RNF152Q8N8N0 203 aa3.3□□□□□ -1.88
ATXN3-241ENST00000556374 TOMM6Q96B49 74 aa3.3□□□□□ -1.88
ATXN3-241ENST00000556374 TMEM141Q96I45 108 aa3.3□□□□□ -1.88
ATXN3-241ENST00000556374 CSTL1Q9H114 145 aa3.3□□□□□ -1.88
ATXN3-241ENST00000556374 MAP6D1Q9H9H5 199 aa3.3□□□□□ -1.88
ATXN3-241ENST00000556374 MRPL16Q9NX20 251 aaKnown RBP3.3□□□□□ -1.88
ATXN3-241ENST00000556374 IGLV2-18A0A075B6J9 118 aa3.29□□□□□ -1.88
ATXN3-241ENST00000556374 IGKV2D-26A0A0A0MRZ7 120 aa3.29□□□□□ -1.88
ATXN3-241ENST00000556374 E9PLD3 99 aa3.29□□□□□ -1.88
ATXN3-241ENST00000556374 G3V4G9 280 aa3.29□□□□□ -1.88
ATXN3-241ENST00000556374 H3BUX3 64 aa3.29□□□□□ -1.88
ATXN3-241ENST00000556374 SAP30O75446 220 aa3.29□□□□□ -1.88
ATXN3-241ENST00000556374 IGKV3-20P01619 116 aa3.29□□□□□ -1.88
ATXN3-241ENST00000556374 IGHG4P01861 327 aa3.29□□□□□ -1.88
ATXN3-241ENST00000556374 SCGB1A1P11684 91 aa3.29□□□□□ -1.88
ATXN3-241ENST00000556374 LGALS3P17931 250 aaKnown RBP3.29□□□□□ -1.88
ATXN3-241ENST00000556374 RNASE4P34096 147 aaKnown RBP3.29□□□□□ -1.88
ATXN3-241ENST00000556374 SNRPD3P62318 126 aaKnown RBP3.29□□□□□ -1.88
ATXN3-241ENST00000556374 SRSF9Q13242 221 aaKnown RBP eCLIP3.29□□□□□ -1.88
ATXN3-241ENST00000556374 ZNF56Q15929 161 aa3.29□□□□□ -1.88
ATXN3-241ENST00000556374 RRN3P1Q2M238 152 aa3.29□□□□□ -1.88
ATXN3-241ENST00000556374 C12orf74Q32Q52 190 aa3.29□□□□□ -1.88
ATXN3-241ENST00000556374 CFAP161Q6P656 301 aa3.29□□□□□ -1.88
ATXN3-241ENST00000556374 LRRC75A-AS1Q8N1F1 130 aa3.29□□□□□ -1.88
ATXN3-241ENST00000556374 C14orf178Q8N769 122 aaPredicted RBP3.29□□□□□ -1.88
ATXN3-241ENST00000556374 DLX4Q92988 240 aaPredicted RBP3.29□□□□□ -1.88
ATXN3-241ENST00000556374 CCL19Q99731 98 aa3.29□□□□□ -1.88
ATXN3-241ENST00000556374 PRADC1Q9BSG0 188 aa3.29□□□□□ -1.88
ATXN3-241ENST00000556374 VCX2Q9H322 139 aa3.29□□□□□ -1.88
ATXN3-241ENST00000556374 DAZ1Q9NQZ3 744 aaKnown RBP3.29□□□□□ -1.88
ATXN3-241ENST00000556374 TP53TG1Q9Y2A0 90 aa3.29□□□□□ -1.88
ATXN3-241ENST00000556374 TRRAPQ9Y4A5 3859 aa3.29□□□□□ -1.88
ATXN3-241ENST00000556374 IGKV3-7A0A075B6H7 116 aa3.28□□□□□ -1.88
ATXN3-241ENST00000556374 IGHV3OR16-10A0A075B7F0 116 aa3.28□□□□□ -1.88
ATXN3-241ENST00000556374 A0A1B0GUV1 79 aa3.28□□□□□ -1.88
ATXN3-241ENST00000556374 IGLL5B9A064 214 aa3.28□□□□□ -1.88
ATXN3-241ENST00000556374 VCYO14598 125 aa3.28□□□□□ -1.88
ATXN3-241ENST00000556374 DUSP14O95147 198 aaKnown RBP3.28□□□□□ -1.88
ATXN3-241ENST00000556374 BRI3O95415 125 aa3.28□□□□□ -1.88
ATXN3-241ENST00000556374 IGHV3-11P01762 117 aa3.28□□□□□ -1.88
ATXN3-241ENST00000556374 IGF1P05019 195 aa3.28□□□□□ -1.88
ATXN3-241ENST00000556374 LMO4P61968 165 aa3.28□□□□□ -1.88
ATXN3-241ENST00000556374 RPL32P62910 135 aaKnown RBP3.28□□□□□ -1.88
ATXN3-241ENST00000556374 PMVKQ15126 192 aa3.28□□□□□ -1.88
ATXN3-241ENST00000556374 RHOHQ15669 191 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms