RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 C1orf158Q8N1D5 194 aa6.48□□□□□ -1.37
TDP1-210ENST00000554976 JPT2Q9H910 190 aa6.48□□□□□ -1.37
TDP1-210ENST00000554976 EDA2RQ9HAV5 297 aa6.48□□□□□ -1.37
TDP1-210ENST00000554976 CRYGDP07320 174 aa6.47□□□□□ -1.37
TDP1-210ENST00000554976 FA2HQ7L5A8 372 aa6.47□□□□□ -1.37
TDP1-210ENST00000554976 CSNK1G2-AS1Q8NCQ2 148 aa6.47□□□□□ -1.37
TDP1-210ENST00000554976 SPXQ9BT56 116 aa6.47□□□□□ -1.37
TDP1-210ENST00000554976 SS18L2Q9UHA2 77 aa6.47□□□□□ -1.37
TDP1-210ENST00000554976 PIK3CD-AS1Q5SR53 167 aa6.47□□□□□ -1.37
TDP1-210ENST00000554976 MORN3Q6PF18 240 aaPredicted RBP6.47□□□□□ -1.37
TDP1-210ENST00000554976 C14orf178Q8N769 122 aaPredicted RBP6.47□□□□□ -1.37
TDP1-210ENST00000554976 Q8N8P6 123 aa6.47□□□□□ -1.37
TDP1-210ENST00000554976 AP5S1Q9NUS5 200 aa6.47□□□□□ -1.37
TDP1-210ENST00000554976 TRGV11A0A075B6L2 103 aa6.47□□□□□ -1.37
TDP1-210ENST00000554976 S100A4P26447 101 aaKnown RBP6.47□□□□□ -1.37
TDP1-210ENST00000554976 ZNF747Q9BV97 191 aa6.47□□□□□ -1.37
TDP1-210ENST00000554976 LOC389332A0A1B0GUA5 103 aa6.46□□□□□ -1.38
TDP1-210ENST00000554976 WIPF1O43516 503 aa6.46□□□□□ -1.38
TDP1-210ENST00000554976 PRM2P04554 102 aa6.46□□□□□ -1.38
TDP1-210ENST00000554976 CMC4P56277 68 aaPredicted RBP6.46□□□□□ -1.38
TDP1-210ENST00000554976 RPL32P62910 135 aaKnown RBP6.46□□□□□ -1.38
TDP1-210ENST00000554976 PMCHL2Q9BQD1 86 aa6.46□□□□□ -1.38
TDP1-210ENST00000554976 WFDC10AQ9H1F0 79 aa6.46□□□□□ -1.38
TDP1-210ENST00000554976 MAP1LC3AQ9H492 121 aa6.46□□□□□ -1.38
TDP1-210ENST00000554976 TIMM8BQ9Y5J9 83 aaPredicted RBP6.46□□□□□ -1.38
TDP1-210ENST00000554976 A6NDN8 102 aa6.46□□□□□ -1.38
TDP1-210ENST00000554976 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.46□□□□□ -1.38
TDP1-210ENST00000554976 TP73-AS1Q9UF72 201 aa6.46□□□□□ -1.38
TDP1-210ENST00000554976 HIVEP2P31629 2446 aa6.46□□□□□ -1.38
TDP1-210ENST00000554976 INSP01308 110 aa6.45□□□□□ -1.38
TDP1-210ENST00000554976 RPL24P83731 157 aaKnown RBP6.45□□□□□ -1.38
TDP1-210ENST00000554976 PRSS3P2Q8NHM4 247 aa6.45□□□□□ -1.38
TDP1-210ENST00000554976 RPL39LQ96EH5 51 aaKnown RBP6.45□□□□□ -1.38
TDP1-210ENST00000554976 C20orf78Q9BR46 151 aa6.45□□□□□ -1.38
TDP1-210ENST00000554976 NXT2Q9NPJ8 142 aaKnown RBP6.45□□□□□ -1.38
TDP1-210ENST00000554976 ERG28Q9UKR5 140 aa6.45□□□□□ -1.38
TDP1-210ENST00000554976 NIPBLQ6KC79 2804 aaeCLIP6.45□□□□□ -1.38
TDP1-210ENST00000554976 SYS1-DBNDD2H3BUS1 97 aa6.45□□□□□ -1.38
TDP1-210ENST00000554976 SUMO4Q6EEV6 95 aa6.45□□□□□ -1.38
TDP1-210ENST00000554976 TMEM70Q9BUB7 260 aa6.45□□□□□ -1.38
TDP1-210ENST00000554976 SPCS1Q9Y6A9 102 aa6.45□□□□□ -1.38
TDP1-210ENST00000554976 ANK2Q01484 3957 aa6.45□□□□□ -1.38
TDP1-210ENST00000554976 A0A1W2PPM0 123 aa6.44□□□□□ -1.38
TDP1-210ENST00000554976 PLAC8L1A1L4L8 177 aa6.44□□□□□ -1.38
TDP1-210ENST00000554976 H3BUT2 72 aa6.44□□□□□ -1.38
TDP1-210ENST00000554976 LEPROTL1O95214 131 aa6.44□□□□□ -1.38
TDP1-210ENST00000554976 TMEM97Q5BJF2 176 aa6.44□□□□□ -1.38
TDP1-210ENST00000554976 TRBV6-5A0A0K0K1A5 114 aa6.44□□□□□ -1.38
TDP1-210ENST00000554976 GAGE5Q13069 117 aa6.44□□□□□ -1.38
TDP1-210ENST00000554976 GAGE6Q13070 117 aa6.44□□□□□ -1.38
TDP1-210ENST00000554976 LINC01545Q5VT33 79 aa6.44□□□□□ -1.38
TDP1-210ENST00000554976 SMIM2Q9BVW6 85 aa6.44□□□□□ -1.38
TDP1-210ENST00000554976 TENM1Q9UKZ4 2725 aa6.44□□□□□ -1.38
TDP1-210ENST00000554976 FCER1GP30273 86 aa6.44□□□□□ -1.38
TDP1-210ENST00000554976 C2orf91Q6ZV80 131 aa6.44□□□□□ -1.38
TDP1-210ENST00000554976 STHQ8IWL8 128 aa6.44□□□□□ -1.38
TDP1-210ENST00000554976 WFDC9Q8NEX5 89 aa6.44□□□□□ -1.38
TDP1-210ENST00000554976 M0QY20 66 aa6.43□□□□□ -1.38
TDP1-210ENST00000554976 HBDP02042 147 aa6.43□□□□□ -1.38
TDP1-210ENST00000554976 INSL3P51460 131 aa6.43□□□□□ -1.38
TDP1-210ENST00000554976 POLR2KP53803 58 aaKnown RBP6.43□□□□□ -1.38
TDP1-210ENST00000554976 MTORP42345 2549 aa6.43□□□□□ -1.38
TDP1-210ENST00000554976 PF4P02776 101 aa6.43□□□□□ -1.38
TDP1-210ENST00000554976 SUMO2P61956 95 aaKnown RBP6.43□□□□□ -1.38
TDP1-210ENST00000554976 SYT8Q8NBV8 401 aa6.43□□□□□ -1.38
TDP1-210ENST00000554976 A0A087WWL8 130 aa6.42□□□□□ -1.38
TDP1-210ENST00000554976 K7EMI3 77 aa6.42□□□□□ -1.38
TDP1-210ENST00000554976 KRTAP24-1Q3LI83 254 aa6.42□□□□□ -1.38
TDP1-210ENST00000554976 SPANXB1Q9NS25 103 aaPredicted RBP6.42□□□□□ -1.38
TDP1-210ENST00000554976 HSPB8Q9UJY1 196 aa6.42□□□□□ -1.38
TDP1-210ENST00000554976 TRRAPQ9Y4A5 3859 aa6.42□□□□□ -1.38
TDP1-210ENST00000554976 M0R2P5 195 aa6.42□□□□□ -1.38
TDP1-210ENST00000554976 COX8AP10176 69 aa6.42□□□□□ -1.38
TDP1-210ENST00000554976 ZNF415Q09FC8 603 aa6.42□□□□□ -1.38
TDP1-210ENST00000554976 C9orf66Q5T8R8 295 aa6.42□□□□□ -1.38
TDP1-210ENST00000554976 RNF183Q96D59 192 aa6.42□□□□□ -1.38
TDP1-210ENST00000554976 hDV102S1A0JD36 115 aa6.42□□□□□ -1.38
TDP1-210ENST00000554976 RS1O15537 224 aa6.42□□□□□ -1.38
TDP1-210ENST00000554976 FABP2P12104 132 aa6.42□□□□□ -1.38
TDP1-210ENST00000554976 XCL2Q9UBD3 114 aa6.42□□□□□ -1.38
TDP1-210ENST00000554976 MGPP08493 103 aa6.41□□□□□ -1.38
TDP1-210ENST00000554976 LAGE3Q14657 143 aa6.41□□□□□ -1.38
TDP1-210ENST00000554976 ZNF876PQ49A33 203 aa6.41□□□□□ -1.38
TDP1-210ENST00000554976 CFAP126Q5VTH2 177 aa6.41□□□□□ -1.38
TDP1-210ENST00000554976 VWFP04275 2813 aa6.41□□□□□ -1.38
TDP1-210ENST00000554976 TRBV27A0A0K0K1C4 114 aa6.41□□□□□ -1.38
TDP1-210ENST00000554976 Q6ZSN1 163 aa6.41□□□□□ -1.38
TDP1-210ENST00000554976 PRIMA1Q86XR5 153 aa6.41□□□□□ -1.38
TDP1-210ENST00000554976 TMEM158Q8WZ71 300 aa6.41□□□□□ -1.38
TDP1-210ENST00000554976 ZMAT4Q9H898 229 aa6.41□□□□□ -1.38
TDP1-210ENST00000554976 SIVA1O15304 175 aa6.4□□□□□ -1.38
TDP1-210ENST00000554976 PPP1R17O96001 155 aa6.4□□□□□ -1.38
TDP1-210ENST00000554976 TOMM6Q96B49 74 aa6.4□□□□□ -1.38
TDP1-210ENST00000554976 LINC01587Q99440 93 aa6.4□□□□□ -1.38
TDP1-210ENST00000554976 MAP1LC3CQ9BXW4 147 aa6.4□□□□□ -1.38
TDP1-210ENST00000554976 CYSLTR1Q9Y271 337 aa6.4□□□□□ -1.38
TDP1-210ENST00000554976 F8W1H4 67 aa6.4□□□□□ -1.39
TDP1-210ENST00000554976 LGALS9BQ3B8N2 356 aa6.4□□□□□ -1.39
TDP1-210ENST00000554976 LGALS9CQ6DKI2 356 aa6.4□□□□□ -1.39
TDP1-210ENST00000554976 BOD1L2Q8IYS8 172 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms