RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 NRACQ8N912 160 aa9.89□□□□□ -0.83
RNF4-208ENST00000507247 PRADC1Q9BSG0 188 aa9.89□□□□□ -0.83
RNF4-208ENST00000507247 TRBV10-1A0A0K0K1A3 114 aa9.88□□□□□ -0.83
RNF4-208ENST00000507247 GAGE12JA6NER3 117 aa9.88□□□□□ -0.83
RNF4-208ENST00000507247 LINC00694P0DN24 101 aa9.88□□□□□ -0.83
RNF4-208ENST00000507247 GAGE1Q13065 139 aa9.88□□□□□ -0.83
RNF4-208ENST00000507247 GAGE4Q13068 117 aa9.88□□□□□ -0.83
RNF4-208ENST00000507247 GAGE5Q13069 117 aa9.88□□□□□ -0.83
RNF4-208ENST00000507247 GAGE13Q4V321 117 aa9.88□□□□□ -0.83
RNF4-208ENST00000507247 ZFAND6Q6FIF0 208 aa9.88□□□□□ -0.83
RNF4-208ENST00000507247 ORMDL3Q8N138 153 aa9.88□□□□□ -0.83
RNF4-208ENST00000507247 MUC7Q8TAX7 377 aa9.88□□□□□ -0.83
RNF4-208ENST00000507247 NIT2Q9NQR4 276 aa9.88□□□□□ -0.83
RNF4-208ENST00000507247 NUPR2A6NF83 97 aa9.87□□□□□ -0.83
RNF4-208ENST00000507247 IGLL5B9A064 214 aa9.87□□□□□ -0.83
RNF4-208ENST00000507247 H3BNG1 76 aa9.87□□□□□ -0.83
RNF4-208ENST00000507247 NPYP01303 97 aa9.87□□□□□ -0.83
RNF4-208ENST00000507247 PPBPP02775 128 aa9.87□□□□□ -0.83
RNF4-208ENST00000507247 OR10J3Q5JRS4 329 aa9.87□□□□□ -0.83
RNF4-208ENST00000507247 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.87□□□□□ -0.83
RNF4-208ENST00000507247 ZNRF2Q8NHG8 242 aa9.87□□□□□ -0.83
RNF4-208ENST00000507247 PRELID3AQ96N28 172 aa9.87□□□□□ -0.83
RNF4-208ENST00000507247 A0A096LPF7 62 aa9.86□□□□□ -0.83
RNF4-208ENST00000507247 PHOX2AO14813 284 aa9.86□□□□□ -0.83
RNF4-208ENST00000507247 TNFRSF6BO95407 300 aa9.86□□□□□ -0.83
RNF4-208ENST00000507247 TRGC2P03986 189 aa9.86□□□□□ -0.83
RNF4-208ENST00000507247 ICOSQ9Y6W8 199 aa9.86□□□□□ -0.83
RNF4-208ENST00000507247 RYR3Q15413 4870 aa9.86□□□□□ -0.83
RNF4-208ENST00000507247 TRBV7-3A0A075B6L6 115 aa9.85□□□□□ -0.83
RNF4-208ENST00000507247 TRBV6-5A0A0K0K1A5 114 aa9.85□□□□□ -0.83
RNF4-208ENST00000507247 NUDT3O95989 172 aa9.85□□□□□ -0.83
RNF4-208ENST00000507247 UBE2D3P61077 147 aa9.85□□□□□ -0.83
RNF4-208ENST00000507247 UBE2D2P62837 147 aa9.85□□□□□ -0.83
RNF4-208ENST00000507247 RPL36AP83881 106 aaKnown RBP9.85□□□□□ -0.83
RNF4-208ENST00000507247 RPL36ALQ969Q0 106 aaKnown RBP9.85□□□□□ -0.83
RNF4-208ENST00000507247 DNAJC30Q96LL9 226 aa9.85□□□□□ -0.83
RNF4-208ENST00000507247 ALKBH7Q9BT30 221 aaPredicted RBP9.85□□□□□ -0.83
RNF4-208ENST00000507247 TNFRSF18Q9Y5U5 241 aa9.85□□□□□ -0.83
RNF4-208ENST00000507247 DNAH7Q8WXX0 4024 aa9.85□□□□□ -0.83
RNF4-208ENST00000507247 SRIP30626 198 aa9.84□□□□□ -0.83
RNF4-208ENST00000507247 MRPL23Q16540 153 aaKnown RBP9.84□□□□□ -0.83
RNF4-208ENST00000507247 C15orf53Q8NAA6 179 aa9.84□□□□□ -0.83
RNF4-208ENST00000507247 IGHV3-38A0A0C4DH36 116 aa9.83□□□□□ -0.84
RNF4-208ENST00000507247 SDHAF1A6NFY7 115 aa9.83□□□□□ -0.84
RNF4-208ENST00000507247 PPP1R17O96001 155 aa9.83□□□□□ -0.84
RNF4-208ENST00000507247 POLR2KP53803 58 aaKnown RBP9.83□□□□□ -0.84
RNF4-208ENST00000507247 SUMO2P61956 95 aaKnown RBP9.83□□□□□ -0.84
RNF4-208ENST00000507247 NEGR1Q7Z3B1 354 aa9.83□□□□□ -0.84
RNF4-208ENST00000507247 TMEM70Q9BUB7 260 aa9.83□□□□□ -0.84
RNF4-208ENST00000507247 ST20Q9HBF5 79 aa9.83□□□□□ -0.84
RNF4-208ENST00000507247 APLNQ9ULZ1 77 aa9.83□□□□□ -0.84
RNF4-208ENST00000507247 LAMTOR2Q9Y2Q5 125 aa9.83□□□□□ -0.84
RNF4-208ENST00000507247 KLK5Q9Y337 293 aaPredicted RBP9.83□□□□□ -0.84
RNF4-208ENST00000507247 ATP6V0E2Q8NHE4 81 aa9.82□□□□□ -0.84
RNF4-208ENST00000507247 DEFB104AQ8WTQ1 72 aa9.82□□□□□ -0.84
RNF4-208ENST00000507247 C20orf78Q9BR46 151 aa9.82□□□□□ -0.84
RNF4-208ENST00000507247 IQCJQ1A5X6 159 aa9.81□□□□□ -0.84
RNF4-208ENST00000507247 SMIM2Q9BVW6 85 aa9.81□□□□□ -0.84
RNF4-208ENST00000507247 MAP1LC3AQ9H492 121 aa9.81□□□□□ -0.84
RNF4-208ENST00000507247 LOC389332A0A1B0GUA5 103 aa9.8□□□□□ -0.84
RNF4-208ENST00000507247 PRSS47A8MTI9 375 aa9.8□□□□□ -0.84
RNF4-208ENST00000507247 RPL32P62910 135 aaKnown RBP9.8□□□□□ -0.84
RNF4-208ENST00000507247 C18orf32Q8TCD1 76 aa9.8□□□□□ -0.84
RNF4-208ENST00000507247 IGLV2-18A0A075B6J9 118 aa9.79□□□□□ -0.84
RNF4-208ENST00000507247 TRBV27A0A0K0K1C4 114 aa9.79□□□□□ -0.84
RNF4-208ENST00000507247 CASC10Q5T4H9 136 aa9.79□□□□□ -0.84
RNF4-208ENST00000507247 SH2D6Q7Z4S9 175 aa9.79□□□□□ -0.84
RNF4-208ENST00000507247 DAZ4Q86SG3 579 aaKnown RBP9.79□□□□□ -0.84
RNF4-208ENST00000507247 DAZ3Q9NR90 486 aaKnown RBP9.79□□□□□ -0.84
RNF4-208ENST00000507247 C3orf84H3BNL1 204 aa9.78□□□□□ -0.84
RNF4-208ENST00000507247 I3L3M4 83 aa9.78□□□□□ -0.84
RNF4-208ENST00000507247 PMCHP20382 165 aa9.78□□□□□ -0.84
RNF4-208ENST00000507247 IFI27P40305 119 aaPredicted RBP9.78□□□□□ -0.84
RNF4-208ENST00000507247 ESRGQ1W209 222 aa9.78□□□□□ -0.84
RNF4-208ENST00000507247 LYPD5Q6UWN5 251 aa9.78□□□□□ -0.84
RNF4-208ENST00000507247 NTM-AS1Q6ZSK4 140 aa9.78□□□□□ -0.84
RNF4-208ENST00000507247 GTSF1LQ9H1H1 148 aa9.78□□□□□ -0.84
RNF4-208ENST00000507247 DYNC2H1Q8NCM8 4307 aaKnown RBP9.77□□□□□ -0.85
RNF4-208ENST00000507247 CSMD3Q7Z407 3707 aa9.77□□□□□ -0.85
RNF4-208ENST00000507247 VCYO14598 125 aa9.77□□□□□ -0.85
RNF4-208ENST00000507247 TSHBP01222 138 aa9.77□□□□□ -0.85
RNF4-208ENST00000507247 TCTAP57738 103 aa9.77□□□□□ -0.85
RNF4-208ENST00000507247 HIST1H2BKO60814 126 aa9.76□□□□□ -0.85
RNF4-208ENST00000507247 HIST1H2BJP06899 126 aa9.76□□□□□ -0.85
RNF4-208ENST00000507247 HIST1H2BOP23527 126 aa9.76□□□□□ -0.85
RNF4-208ENST00000507247 HIST1H2BBP33778 126 aa9.76□□□□□ -0.85
RNF4-208ENST00000507247 TIRAPP58753 221 aa9.76□□□□□ -0.85
RNF4-208ENST00000507247 HIST1H2BDP58876 126 aa9.76□□□□□ -0.85
RNF4-208ENST00000507247 HIST1H2BCP62807 126 aa9.76□□□□□ -0.85
RNF4-208ENST00000507247 COTL1Q14019 142 aa9.76□□□□□ -0.85
RNF4-208ENST00000507247 HIST2H2BEQ16778 126 aa9.76□□□□□ -0.85
RNF4-208ENST00000507247 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.76□□□□□ -0.85
RNF4-208ENST00000507247 Q8N8P6 123 aa9.76□□□□□ -0.85
RNF4-208ENST00000507247 HIST1H2BHQ93079 126 aa9.76□□□□□ -0.85
RNF4-208ENST00000507247 URB1-AS1Q96HZ7 61 aa9.76□□□□□ -0.85
RNF4-208ENST00000507247 HIST1H2BNQ99877 126 aa9.76□□□□□ -0.85
RNF4-208ENST00000507247 HIST1H2BMQ99879 126 aa9.76□□□□□ -0.85
RNF4-208ENST00000507247 C1orf196B1AJZ1 125 aa9.75□□□□□ -0.85
RNF4-208ENST00000507247 TCAPO15273 167 aa9.75□□□□□ -0.85
RNF4-208ENST00000507247 NXT2Q9NPJ8 142 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms