RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 CXCL1P09341 107 aa3.28□□□□□ -1.88
CDH9-203ENST00000505045 RNASE3P12724 160 aaKnown RBP3.28□□□□□ -1.88
CDH9-203ENST00000505045 HIST1H2BOP23527 126 aa3.28□□□□□ -1.88
CDH9-203ENST00000505045 HIST1H2BBP33778 126 aa3.28□□□□□ -1.88
CDH9-203ENST00000505045 TAGLN2P37802 199 aaKnown RBP3.28□□□□□ -1.88
CDH9-203ENST00000505045 FHITP49789 147 aa3.28□□□□□ -1.88
CDH9-203ENST00000505045 HIST1H2BDP58876 126 aa3.28□□□□□ -1.88
CDH9-203ENST00000505045 UBE2G2P60604 165 aa3.28□□□□□ -1.88
CDH9-203ENST00000505045 HIST1H2BCP62807 126 aa3.28□□□□□ -1.88
CDH9-203ENST00000505045 ELOBQ15370 118 aa3.28□□□□□ -1.88
CDH9-203ENST00000505045 HIST2H2BEQ16778 126 aa3.28□□□□□ -1.88
CDH9-203ENST00000505045 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.28□□□□□ -1.88
CDH9-203ENST00000505045 C5orf17Q8NAS9 161 aa3.28□□□□□ -1.88
CDH9-203ENST00000505045 HIST1H2BHQ93079 126 aa3.28□□□□□ -1.88
CDH9-203ENST00000505045 HIST1H2BNQ99877 126 aa3.28□□□□□ -1.88
CDH9-203ENST00000505045 HIST1H2BMQ99879 126 aa3.28□□□□□ -1.88
CDH9-203ENST00000505045 Q9UF83 564 aa3.28□□□□□ -1.88
CDH9-203ENST00000505045 IGHV3-73A0A0B4J1V6 119 aa3.27□□□□□ -1.89
CDH9-203ENST00000505045 TRAV21A0A0B4J279 112 aa3.27□□□□□ -1.89
CDH9-203ENST00000505045 IGKV3D-20A0A0C4DH25 116 aa3.27□□□□□ -1.89
CDH9-203ENST00000505045 A0A1W2PPQ1 181 aa3.27□□□□□ -1.89
CDH9-203ENST00000505045 C9JCJ5 164 aa3.27□□□□□ -1.89
CDH9-203ENST00000505045 M0R2P5 195 aa3.27□□□□□ -1.89
CDH9-203ENST00000505045 TRGC1P0CF51 173 aa3.27□□□□□ -1.89
CDH9-203ENST00000505045 SRIP30626 198 aa3.27□□□□□ -1.89
CDH9-203ENST00000505045 JOSD1Q15040 202 aaPredicted RBP3.27□□□□□ -1.89
CDH9-203ENST00000505045 ZNF506Q5JVG8 444 aa3.27□□□□□ -1.89
CDH9-203ENST00000505045 NEGR1Q7Z3B1 354 aa3.27□□□□□ -1.89
CDH9-203ENST00000505045 PRNTQ86SH4 94 aa3.27□□□□□ -1.89
CDH9-203ENST00000505045 Q86TA4 180 aa3.27□□□□□ -1.89
CDH9-203ENST00000505045 MAPKAPK5-AS1Q8N8E1 139 aa3.27□□□□□ -1.89
CDH9-203ENST00000505045 CYB561D1Q8N8Q1 229 aa3.27□□□□□ -1.89
CDH9-203ENST00000505045 C9orf85Q96MD7 179 aa3.27□□□□□ -1.89
CDH9-203ENST00000505045 ACTR3CQ9C0K3 210 aaPredicted RBP3.27□□□□□ -1.89
CDH9-203ENST00000505045 SDF2L1Q9HCN8 221 aa3.27□□□□□ -1.89
CDH9-203ENST00000505045 PSG8Q9UQ74 426 aa3.27□□□□□ -1.89
CDH9-203ENST00000505045 CBY1Q9Y3M2 126 aa3.27□□□□□ -1.89
CDH9-203ENST00000505045 ARL2-SNX15V9GYD0 113 aa3.27□□□□□ -1.89
CDH9-203ENST00000505045 DNAH8Q96JB1 4490 aa3.27□□□□□ -1.89
CDH9-203ENST00000505045 FLG2Q5D862 2391 aaPredicted RBP3.26□□□□□ -1.89
CDH9-203ENST00000505045 TGIF2-C20orf24A0A0A6YYL0 155 aa3.26□□□□□ -1.89
CDH9-203ENST00000505045 PGPEP1LA6NFU8 196 aa3.26□□□□□ -1.89
CDH9-203ENST00000505045 CDK2AP2O75956 126 aa3.26□□□□□ -1.89
CDH9-203ENST00000505045 CXorf1O96002 111 aa3.26□□□□□ -1.89
CDH9-203ENST00000505045 TRGC2P03986 189 aa3.26□□□□□ -1.89
CDH9-203ENST00000505045 PFN1P07737 140 aaKnown RBP3.26□□□□□ -1.89
CDH9-203ENST00000505045 FABP4P15090 132 aa3.26□□□□□ -1.89
CDH9-203ENST00000505045 GATA1P15976 413 aaPredicted RBP3.26□□□□□ -1.89
CDH9-203ENST00000505045 SERF2P84101 59 aa3.26□□□□□ -1.89
CDH9-203ENST00000505045 MRPL23Q16540 153 aaKnown RBP3.26□□□□□ -1.89
CDH9-203ENST00000505045 ZNF876PQ49A33 203 aa3.26□□□□□ -1.89
CDH9-203ENST00000505045 AKR1C8PQ5T2L2 129 aa3.26□□□□□ -1.89
CDH9-203ENST00000505045 CFAP126Q5VTH2 177 aa3.26□□□□□ -1.89
CDH9-203ENST00000505045 SLC25A29Q8N8R3 303 aa3.26□□□□□ -1.89
CDH9-203ENST00000505045 OR4C5Q8NGB2 326 aa3.26□□□□□ -1.89
CDH9-203ENST00000505045 FAM213BQ8TBF2 198 aa3.26□□□□□ -1.89
CDH9-203ENST00000505045 FRZBQ92765 325 aa3.26□□□□□ -1.89
CDH9-203ENST00000505045 ZC2HC1AQ96GY0 325 aa3.26□□□□□ -1.89
CDH9-203ENST00000505045 SPXQ9BT56 116 aa3.26□□□□□ -1.89
CDH9-203ENST00000505045 KRTAP2-2Q9BYT5 123 aa3.26□□□□□ -1.89
CDH9-203ENST00000505045 JPT2Q9H910 190 aa3.26□□□□□ -1.89
CDH9-203ENST00000505045 EPDR1Q9UM22 224 aa3.26□□□□□ -1.89
CDH9-203ENST00000505045 VPS13BQ7Z7G8 4022 aa3.26□□□□□ -1.89
CDH9-203ENST00000505045 CTXND1A0A1B0GTU2 59 aa3.26□□□□□ -1.89
CDH9-203ENST00000505045 PEX7O00628 323 aa3.26□□□□□ -1.89
CDH9-203ENST00000505045 PHOX2AO14813 284 aa3.26□□□□□ -1.89
CDH9-203ENST00000505045 LINC00694P0DN24 101 aa3.26□□□□□ -1.89
CDH9-203ENST00000505045 CRIP1P50238 77 aa3.26□□□□□ -1.89
CDH9-203ENST00000505045 HAMPP81172 84 aa3.26□□□□□ -1.89
CDH9-203ENST00000505045 ARL6IP6Q8N6S5 226 aa3.26□□□□□ -1.89
CDH9-203ENST00000505045 NHLRC2Q8NBF2 726 aa3.26□□□□□ -1.89
CDH9-203ENST00000505045 PACRGQ96M98 296 aaPredicted RBP3.26□□□□□ -1.89
CDH9-203ENST00000505045 HIST1H2BLQ99880 126 aa3.26□□□□□ -1.89
CDH9-203ENST00000505045 SAMD10Q9BYL1 202 aa3.26□□□□□ -1.89
CDH9-203ENST00000505045 TMEM167BQ9NRX6 74 aa3.26□□□□□ -1.89
CDH9-203ENST00000505045 TMEM242Q9NWH2 141 aa3.26□□□□□ -1.89
CDH9-203ENST00000505045 LY96Q9Y6Y9 160 aa3.26□□□□□ -1.89
CDH9-203ENST00000505045 DMBT1Q9UGM3 2413 aaPredicted RBP3.25□□□□□ -1.89
CDH9-203ENST00000505045 A0A087WTM6 91 aa3.25□□□□□ -1.89
CDH9-203ENST00000505045 A0A1B0GV50 99 aa3.25□□□□□ -1.89
CDH9-203ENST00000505045 SERTM2A0A1B0GWG4 89 aa3.25□□□□□ -1.89
CDH9-203ENST00000505045 A0A1W2PRE2 83 aa3.25□□□□□ -1.89
CDH9-203ENST00000505045 MAP1LC3B2A6NCE7 125 aa3.25□□□□□ -1.89
CDH9-203ENST00000505045 FBLL1A6NHQ2 334 aaKnown RBP3.25□□□□□ -1.89
CDH9-203ENST00000505045 H3BVH4 76 aa3.25□□□□□ -1.89
CDH9-203ENST00000505045 M0R143 59 aa3.25□□□□□ -1.89
CDH9-203ENST00000505045 RS1O15537 224 aa3.25□□□□□ -1.89
CDH9-203ENST00000505045 MBP02144 154 aa3.25□□□□□ -1.89
CDH9-203ENST00000505045 KRTAP10-1P60331 282 aa3.25□□□□□ -1.89
CDH9-203ENST00000505045 CCL20P78556 96 aa3.25□□□□□ -1.89
CDH9-203ENST00000505045 PNRC1Q12796 327 aaPredicted RBP3.25□□□□□ -1.89
CDH9-203ENST00000505045 PDZD11Q5EBL8 140 aa3.25□□□□□ -1.89
CDH9-203ENST00000505045 MRPL52Q86TS9 123 aaKnown RBP3.25□□□□□ -1.89
CDH9-203ENST00000505045 ZNF664Q8N3J9 261 aa3.25□□□□□ -1.89
CDH9-203ENST00000505045 KCNS1Q96KK3 526 aa3.25□□□□□ -1.89
CDH9-203ENST00000505045 NDFIP1Q9BT67 221 aa3.25□□□□□ -1.89
CDH9-203ENST00000505045 MAP1LC3BQ9GZQ8 125 aa3.25□□□□□ -1.89
CDH9-203ENST00000505045 CTDSP1Q9GZU7 261 aa3.25□□□□□ -1.89
CDH9-203ENST00000505045 PARLQ9H300 379 aa3.25□□□□□ -1.89
CDH9-203ENST00000505045 OBSCNQ5VST9 7968 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms