RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 LEPROTL1O95214 131 aa11.23□□□□□ -0.61
PCCB-218ENST00000490504 PPP1R17O96001 155 aa11.23□□□□□ -0.61
PCCB-218ENST00000490504 PRM2P04554 102 aa11.23□□□□□ -0.61
PCCB-218ENST00000490504 Q8N8P6 123 aa11.23□□□□□ -0.61
PCCB-218ENST00000490504 RASL10AQ92737 203 aa11.23□□□□□ -0.61
PCCB-218ENST00000490504 GOLT1BQ9Y3E0 138 aa11.23□□□□□ -0.61
PCCB-218ENST00000490504 IGHV3OR16-12A0A075B7B8 117 aa11.22□□□□□ -0.61
PCCB-218ENST00000490504 C3orf79P0CE67 100 aa11.22□□□□□ -0.61
PCCB-218ENST00000490504 CRYGDP07320 174 aa11.21□□□□□ -0.61
PCCB-218ENST00000490504 OR11H2Q8NH07 326 aa11.21□□□□□ -0.61
PCCB-218ENST00000490504 C20orf78Q9BR46 151 aa11.21□□□□□ -0.61
PCCB-218ENST00000490504 IGLV2-18A0A075B6J9 118 aa11.2□□□□□ -0.62
PCCB-218ENST00000490504 FAM74A4Q5TZK3 123 aa11.2□□□□□ -0.62
PCCB-218ENST00000490504 SUMO4Q6EEV6 95 aa11.2□□□□□ -0.62
PCCB-218ENST00000490504 HSPB8Q9UJY1 196 aa11.2□□□□□ -0.62
PCCB-218ENST00000490504 F5H697 171 aa11.2□□□□□ -0.62
PCCB-218ENST00000490504 HBDP02042 147 aa11.2□□□□□ -0.62
PCCB-218ENST00000490504 AZU1P20160 251 aa11.2□□□□□ -0.62
PCCB-218ENST00000490504 SUMO2P61956 95 aaKnown RBP11.2□□□□□ -0.62
PCCB-218ENST00000490504 TMEM263Q8WUH6 116 aaKnown RBP11.2□□□□□ -0.62
PCCB-218ENST00000490504 RPL39LQ96EH5 51 aaKnown RBP11.2□□□□□ -0.62
PCCB-218ENST00000490504 SMIM2Q9BVW6 85 aa11.2□□□□□ -0.62
PCCB-218ENST00000490504 EPPK1P58107 5090 aaKnown RBP11.19□□□□□ -0.62
PCCB-218ENST00000490504 NACAE9PAV3 2078 aa11.19□□□□□ -0.62
PCCB-218ENST00000490504 A0A096LNJ9 63 aa11.19□□□□□ -0.62
PCCB-218ENST00000490504 A8MWV9 139 aa11.19□□□□□ -0.62
PCCB-218ENST00000490504 BTF3P20290 206 aaKnown RBP11.19□□□□□ -0.62
PCCB-218ENST00000490504 ZNF56Q15929 161 aa11.19□□□□□ -0.62
PCCB-218ENST00000490504 CSNK1G2-AS1Q8NCQ2 148 aa11.19□□□□□ -0.62
PCCB-218ENST00000490504 NDUFAF3Q9BU61 184 aa11.19□□□□□ -0.62
PCCB-218ENST00000490504 CEMP1Q6PRD7 247 aaPredicted RBP11.18□□□□□ -0.62
PCCB-218ENST00000490504 LINC00173Q6ZV60 143 aa11.18□□□□□ -0.62
PCCB-218ENST00000490504 Q8N976 141 aa11.18□□□□□ -0.62
PCCB-218ENST00000490504 RNASE8Q8TDE3 154 aaKnown RBP11.18□□□□□ -0.62
PCCB-218ENST00000490504 TMEM70Q9BUB7 260 aa11.18□□□□□ -0.62
PCCB-218ENST00000490504 DEFB4AO15263 64 aa11.17□□□□□ -0.62
PCCB-218ENST00000490504 NUPR2A6NF83 97 aa11.17□□□□□ -0.62
PCCB-218ENST00000490504 FCER1GP30273 86 aa11.17□□□□□ -0.62
PCCB-218ENST00000490504 RPL32P62910 135 aaKnown RBP11.17□□□□□ -0.62
PCCB-218ENST00000490504 LAGE3Q14657 143 aa11.17□□□□□ -0.62
PCCB-218ENST00000490504 ZNF705AQ6ZN79 300 aaPredicted RBP11.17□□□□□ -0.62
PCCB-218ENST00000490504 MAP1LC3CQ9BXW4 147 aa11.17□□□□□ -0.62
PCCB-218ENST00000490504 C11orf68Q9H3H3 251 aaKnown RBP11.17□□□□□ -0.62
PCCB-218ENST00000490504 ST20Q9HBF5 79 aa11.17□□□□□ -0.62
PCCB-218ENST00000490504 K7EMI3 77 aa11.16□□□□□ -0.62
PCCB-218ENST00000490504 NANOS2P60321 138 aaKnown RBP11.16□□□□□ -0.62
PCCB-218ENST00000490504 TEX43Q6ZNM6 134 aa11.16□□□□□ -0.62
PCCB-218ENST00000490504 C16orf74Q96GX8 76 aa11.16□□□□□ -0.62
PCCB-218ENST00000490504 MRPL16Q9NX20 251 aaKnown RBP11.16□□□□□ -0.62
PCCB-218ENST00000490504 TRBV6-5A0A0K0K1A5 114 aa11.15□□□□□ -0.62
PCCB-218ENST00000490504 PCP4L1A6NKN8 68 aa11.15□□□□□ -0.62
PCCB-218ENST00000490504 SYS1-DBNDD2H3BUS1 97 aa11.15□□□□□ -0.62
PCCB-218ENST00000490504 M0QY20 66 aa11.15□□□□□ -0.62
PCCB-218ENST00000490504 RHODO00212 210 aa11.15□□□□□ -0.62
PCCB-218ENST00000490504 CFAP126Q5VTH2 177 aa11.15□□□□□ -0.62
PCCB-218ENST00000490504 UFSP1Q6NVU6 142 aa11.15□□□□□ -0.62
PCCB-218ENST00000490504 PHLDA1Q8WV24 401 aaPredicted RBP11.15□□□□□ -0.62
PCCB-218ENST00000490504 H7C1H1 209 aa11.14□□□□□ -0.63
PCCB-218ENST00000490504 TCAPO15273 167 aa11.14□□□□□ -0.63
PCCB-218ENST00000490504 RS1O15537 224 aa11.14□□□□□ -0.63
PCCB-218ENST00000490504 ORMDL2Q53FV1 153 aa11.14□□□□□ -0.63
PCCB-218ENST00000490504 Q8NAQ8 132 aa11.14□□□□□ -0.63
PCCB-218ENST00000490504 C11orf45Q8TAV5 145 aa11.14□□□□□ -0.63
PCCB-218ENST00000490504 DAZ2Q13117 558 aaKnown RBP11.13□□□□□ -0.63
PCCB-218ENST00000490504 RRN3P1Q2M238 152 aa11.13□□□□□ -0.63
PCCB-218ENST00000490504 PET117Q6UWS5 81 aa11.13□□□□□ -0.63
PCCB-218ENST00000490504 LINC00476Q8WZB0 136 aa11.13□□□□□ -0.63
PCCB-218ENST00000490504 TRGV1A0A0A0MS02 117 aa11.13□□□□□ -0.63
PCCB-218ENST00000490504 IGHV4-28A0A0C4DH34 117 aa11.13□□□□□ -0.63
PCCB-218ENST00000490504 C20orf202A1L168 122 aa11.13□□□□□ -0.63
PCCB-218ENST00000490504 POLR2KP53803 58 aaKnown RBP11.13□□□□□ -0.63
PCCB-218ENST00000490504 LGALS9BQ3B8N2 356 aa11.13□□□□□ -0.63
PCCB-218ENST00000490504 KLK5Q9Y337 293 aaPredicted RBP11.13□□□□□ -0.63
PCCB-218ENST00000490504 X6R8D5 127 aa11.13□□□□□ -0.63
PCCB-218ENST00000490504 IGHV3-73A0A0B4J1V6 119 aa11.12□□□□□ -0.63
PCCB-218ENST00000490504 SPATA12Q7Z6I5 190 aa11.12□□□□□ -0.63
PCCB-218ENST00000490504 VPS13DQ5THJ4 4388 aa11.11□□□□□ -0.63
PCCB-218ENST00000490504 SDHAF1A6NFY7 115 aa11.11□□□□□ -0.63
PCCB-218ENST00000490504 VCYO14598 125 aa11.11□□□□□ -0.63
PCCB-218ENST00000490504 LY6G6CO95867 125 aa11.11□□□□□ -0.63
PCCB-218ENST00000490504 NUDT3O95989 172 aa11.11□□□□□ -0.63
PCCB-218ENST00000490504 PKIAP61925 76 aa11.11□□□□□ -0.63
PCCB-218ENST00000490504 ZFP2Q6ZN57 461 aa11.11□□□□□ -0.63
PCCB-218ENST00000490504 IFI27L1Q96BM0 104 aa11.11□□□□□ -0.63
PCCB-218ENST00000490504 BIRC6Q9NR09 4857 aa11.1□□□□□ -0.63
PCCB-218ENST00000490504 KMT2AQ03164 3969 aa11.1□□□□□ -0.63
PCCB-218ENST00000490504 PLAC8L1A1L4L8 177 aa11.1□□□□□ -0.63
PCCB-218ENST00000490504 MIFP14174 115 aa11.1□□□□□ -0.63
PCCB-218ENST00000490504 ZNF664Q8N3J9 261 aa11.1□□□□□ -0.63
PCCB-218ENST00000490504 VAMP8Q9BV40 100 aa11.1□□□□□ -0.63
PCCB-218ENST00000490504 NOP10Q9NPE3 64 aaKnown RBP11.1□□□□□ -0.63
PCCB-218ENST00000490504 TRBV27A0A0K0K1C4 114 aa11.09□□□□□ -0.63
PCCB-218ENST00000490504 TSTD3H0UI37 97 aa11.09□□□□□ -0.63
PCCB-218ENST00000490504 Q6ZTI0 123 aa11.09□□□□□ -0.63
PCCB-218ENST00000490504 OR4C5Q8NGB2 326 aa11.09□□□□□ -0.63
PCCB-218ENST00000490504 KIR2DL4Q99706 377 aa11.09□□□□□ -0.63
PCCB-218ENST00000490504 H0Y8G0 127 aa11.09□□□□□ -0.63
PCCB-218ENST00000490504 IGHV3-53P01767 116 aa11.09□□□□□ -0.63
PCCB-218ENST00000490504 CTAG1AP78358 180 aa11.09□□□□□ -0.63
PCCB-218ENST00000490504 NEGR1Q7Z3B1 354 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms