RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 RS1O15537 224 aa3.58□□□□□ -1.84
SNRNP40-206ENST00000489853 ENSAO43768 121 aaKnown RBP3.58□□□□□ -1.84
SNRNP40-206ENST00000489853 PFN2P35080 140 aa3.58□□□□□ -1.84
SNRNP40-206ENST00000489853 SPINK14Q6IE38 97 aa3.58□□□□□ -1.84
SNRNP40-206ENST00000489853 LINC01356Q8N9X3 169 aa3.58□□□□□ -1.84
SNRNP40-206ENST00000489853 CCL13Q99616 98 aa3.58□□□□□ -1.84
SNRNP40-206ENST00000489853 C11orf21Q9P2W6 132 aa3.58□□□□□ -1.84
SNRNP40-206ENST00000489853 GCN1Q92616 2671 aaKnown RBP3.57□□□□□ -1.84
SNRNP40-206ENST00000489853 DMXL2Q8TDJ6 3036 aa3.57□□□□□ -1.84
SNRNP40-206ENST00000489853 LAMA1P25391 3075 aa3.57□□□□□ -1.84
SNRNP40-206ENST00000489853 A0A0J9YXY3 114 aa3.57□□□□□ -1.84
SNRNP40-206ENST00000489853 KRTAP9-7A8MTY7 169 aa3.57□□□□□ -1.84
SNRNP40-206ENST00000489853 LYZL6O75951 148 aa3.57□□□□□ -1.84
SNRNP40-206ENST00000489853 INAFM2P0DMQ5 153 aa3.57□□□□□ -1.84
SNRNP40-206ENST00000489853 SLURP1P55000 103 aa3.57□□□□□ -1.84
SNRNP40-206ENST00000489853 ZNF415Q09FC8 603 aa3.57□□□□□ -1.84
SNRNP40-206ENST00000489853 Q6ZT83 130 aa3.57□□□□□ -1.84
SNRNP40-206ENST00000489853 LINC00336Q6ZUF6 198 aa3.57□□□□□ -1.84
SNRNP40-206ENST00000489853 PRIMA1Q86XR5 153 aa3.57□□□□□ -1.84
SNRNP40-206ENST00000489853 DYNAPQ8N1N2 210 aa3.57□□□□□ -1.84
SNRNP40-206ENST00000489853 TTTY12Q9BZ98 90 aa3.57□□□□□ -1.84
SNRNP40-206ENST00000489853 V9GYY9 64 aa3.57□□□□□ -1.84
SNRNP40-206ENST00000489853 FREM2Q5SZK8 3169 aa3.57□□□□□ -1.84
SNRNP40-206ENST00000489853 DSCAMO60469 2012 aa3.57□□□□□ -1.84
SNRNP40-206ENST00000489853 TRAV12-2A0A075B6T6 113 aa3.56□□□□□ -1.84
SNRNP40-206ENST00000489853 IGHV4OR15-8A0A075B7B6 117 aa3.56□□□□□ -1.84
SNRNP40-206ENST00000489853 A0A087WW49 117 aa3.56□□□□□ -1.84
SNRNP40-206ENST00000489853 LY6LH3BQJ8 138 aa3.56□□□□□ -1.84
SNRNP40-206ENST00000489853 VCYO14598 125 aa3.56□□□□□ -1.84
SNRNP40-206ENST00000489853 BUB3O43684 328 aa3.56□□□□□ -1.84
SNRNP40-206ENST00000489853 IGLV1-44P01699 117 aa3.56□□□□□ -1.84
SNRNP40-206ENST00000489853 PRSS2P07478 247 aa3.56□□□□□ -1.84
SNRNP40-206ENST00000489853 APELAP0DMC3 54 aa3.56□□□□□ -1.84
SNRNP40-206ENST00000489853 RPL35AP18077 110 aaKnown RBP3.56□□□□□ -1.84
SNRNP40-206ENST00000489853 SYNJ2BPP57105 145 aa3.56□□□□□ -1.84
SNRNP40-206ENST00000489853 LCE5AQ5TCM9 118 aa3.56□□□□□ -1.84
SNRNP40-206ENST00000489853 PMS2CLQ68D20 193 aa3.56□□□□□ -1.84
SNRNP40-206ENST00000489853 GPHB5Q86YW7 130 aa3.56□□□□□ -1.84
SNRNP40-206ENST00000489853 TMEM86BQ8N661 226 aa3.56□□□□□ -1.84
SNRNP40-206ENST00000489853 RPL39LQ96EH5 51 aaKnown RBP3.56□□□□□ -1.84
SNRNP40-206ENST00000489853 C9orf85Q96MD7 179 aa3.56□□□□□ -1.84
SNRNP40-206ENST00000489853 LITAFQ99732 161 aa3.56□□□□□ -1.84
SNRNP40-206ENST00000489853 TP53TG1Q9Y2A0 90 aa3.56□□□□□ -1.84
SNRNP40-206ENST00000489853 SMAD5-AS1Q9Y6J3 95 aa3.56□□□□□ -1.84
SNRNP40-206ENST00000489853 SERP1Q9Y6X1 66 aa3.56□□□□□ -1.84
SNRNP40-206ENST00000489853 PKD1L2Q7Z442 2459 aa3.56□□□□□ -1.84
SNRNP40-206ENST00000489853 IGHV1-69P01742 117 aa3.56□□□□□ -1.84
SNRNP40-206ENST00000489853 BAALC-AS2P0C853 105 aa3.56□□□□□ -1.84
SNRNP40-206ENST00000489853 NPC2P61916 151 aa3.56□□□□□ -1.84
SNRNP40-206ENST00000489853 FAM222AQ5U5X8 452 aa3.56□□□□□ -1.84
SNRNP40-206ENST00000489853 Q6JHZ5 121 aa3.56□□□□□ -1.84
SNRNP40-206ENST00000489853 Q6ZS52 159 aa3.56□□□□□ -1.84
SNRNP40-206ENST00000489853 TMEM61Q8N0U2 210 aa3.56□□□□□ -1.84
SNRNP40-206ENST00000489853 DEFB108BQ8NET1 73 aa3.56□□□□□ -1.84
SNRNP40-206ENST00000489853 C10orf105Q8TEF2 133 aa3.56□□□□□ -1.84
SNRNP40-206ENST00000489853 RNF5Q99942 180 aa3.56□□□□□ -1.84
SNRNP40-206ENST00000489853 PRR14LQ5THK1 2151 aa3.56□□□□□ -1.84
SNRNP40-206ENST00000489853 DNAJC13O75165 2243 aa3.55□□□□□ -1.84
SNRNP40-206ENST00000489853 PRAC2D3DTV9 90 aa3.55□□□□□ -1.84
SNRNP40-206ENST00000489853 SPRY3O43610 288 aa3.55□□□□□ -1.84
SNRNP40-206ENST00000489853 MED14OSP0DP75 135 aa3.55□□□□□ -1.84
SNRNP40-206ENST00000489853 POLR2KP53803 58 aaKnown RBP3.55□□□□□ -1.84
SNRNP40-206ENST00000489853 KLRB1Q12918 225 aa3.55□□□□□ -1.84
SNRNP40-206ENST00000489853 DAZ2Q13117 558 aaKnown RBP3.55□□□□□ -1.84
SNRNP40-206ENST00000489853 MIAQ16674 131 aa3.55□□□□□ -1.84
SNRNP40-206ENST00000489853 NSUN5P1Q3KNT7 163 aa3.55□□□□□ -1.84
SNRNP40-206ENST00000489853 IGFL4Q6B9Z1 124 aa3.55□□□□□ -1.84
SNRNP40-206ENST00000489853 HIST2H2BCQ6DN03 193 aa3.55□□□□□ -1.84
SNRNP40-206ENST00000489853 HIST2H2BDQ6DRA6 164 aa3.55□□□□□ -1.84
SNRNP40-206ENST00000489853 GFRALQ6UXV0 394 aa3.55□□□□□ -1.84
SNRNP40-206ENST00000489853 DAZ4Q86SG3 579 aaKnown RBP3.55□□□□□ -1.84
SNRNP40-206ENST00000489853 DAZ1Q9NQZ3 744 aaKnown RBP3.55□□□□□ -1.84
SNRNP40-206ENST00000489853 DAZ3Q9NR90 486 aaKnown RBP3.55□□□□□ -1.84
SNRNP40-206ENST00000489853 IGF2RP11717 2491 aa3.55□□□□□ -1.84
SNRNP40-206ENST00000489853 IGHV3OR16-10A0A075B7F0 116 aa3.54□□□□□ -1.84
SNRNP40-206ENST00000489853 IGHV1-18A0A0C4DH31 117 aa3.54□□□□□ -1.84
SNRNP40-206ENST00000489853 LY6G6EA0A0G2JKS1 128 aa3.54□□□□□ -1.84
SNRNP40-206ENST00000489853 CYSRT1A8MQ03 144 aa3.54□□□□□ -1.84
SNRNP40-206ENST00000489853 USP17L23D6RBM5 183 aa3.54□□□□□ -1.84
SNRNP40-206ENST00000489853 COX7A2LO14548 114 aa3.54□□□□□ -1.84
SNRNP40-206ENST00000489853 TIMM17BO60830 172 aa3.54□□□□□ -1.84
SNRNP40-206ENST00000489853 CCL3L1P16619 93 aa3.54□□□□□ -1.84
SNRNP40-206ENST00000489853 ZFP36P26651 326 aaKnown RBP3.54□□□□□ -1.84
SNRNP40-206ENST00000489853 MRPS36P82909 103 aaKnown RBP3.54□□□□□ -1.84
SNRNP40-206ENST00000489853 MRPL53Q96EL3 112 aaKnown RBP3.54□□□□□ -1.84
SNRNP40-206ENST00000489853 U3KQA8 63 aa3.54□□□□□ -1.84
SNRNP40-206ENST00000489853 FLNBO75369 2602 aaKnown RBP3.54□□□□□ -1.84
SNRNP40-206ENST00000489853 IGSF10Q6WRI0 2623 aa3.54□□□□□ -1.84
SNRNP40-206ENST00000489853 SMIM26A0A096LP01 95 aa3.54□□□□□ -1.84
SNRNP40-206ENST00000489853 IGHV3-72A0A0B4J1Y9 119 aa3.54□□□□□ -1.84
SNRNP40-206ENST00000489853 PRYO14603 147 aa3.54□□□□□ -1.84
SNRNP40-206ENST00000489853 MGPP08493 103 aa3.54□□□□□ -1.84
SNRNP40-206ENST00000489853 IGHV3-30-3P0DP02 117 aa3.54□□□□□ -1.84
SNRNP40-206ENST00000489853 RPL39P62891 51 aaKnown RBP3.54□□□□□ -1.84
SNRNP40-206ENST00000489853 ADAMTSL4-AS1Q5T5F5 129 aa3.54□□□□□ -1.84
SNRNP40-206ENST00000489853 C9orf47Q6ZRZ4 202 aa3.54□□□□□ -1.84
SNRNP40-206ENST00000489853 FAM110DQ8TAY7 271 aaPredicted RBP3.54□□□□□ -1.84
SNRNP40-206ENST00000489853 HES7Q9BYE0 225 aa3.54□□□□□ -1.84
SNRNP40-206ENST00000489853 PKIGQ9Y2B9 76 aa3.54□□□□□ -1.84
SNRNP40-206ENST00000489853 LENEPQ9Y5L5 61 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms