RNA–Protein interactions for RNA: ENST00000488250.5

RAPGEF3-211, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 1,947 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-211ENST00000488250 CYSLTR1Q9Y271 337 aa11.68□□□□□ -0.54
RAPGEF3-211ENST00000488250 F8VRH5 84 aa11.67□□□□□ -0.54
RAPGEF3-211ENST00000488250 NEGR1Q7Z3B1 354 aa11.67□□□□□ -0.54
RAPGEF3-211ENST00000488250 LINC01587Q99440 93 aa11.67□□□□□ -0.54
RAPGEF3-211ENST00000488250 SPXQ9BT56 116 aa11.67□□□□□ -0.54
RAPGEF3-211ENST00000488250 IGLV1-51P01701 117 aa11.66□□□□□ -0.54
RAPGEF3-211ENST00000488250 HTN1P15515 57 aa11.66□□□□□ -0.54
RAPGEF3-211ENST00000488250 BVES-AS1Q5T3Y7 98 aa11.66□□□□□ -0.54
RAPGEF3-211ENST00000488250 UFSP1Q6NVU6 142 aa11.66□□□□□ -0.54
RAPGEF3-211ENST00000488250 HIVEP2P31629 2446 aa11.66□□□□□ -0.54
RAPGEF3-211ENST00000488250 CYSRT1A8MQ03 144 aa11.66□□□□□ -0.54
RAPGEF3-211ENST00000488250 RHOHQ15669 191 aa11.66□□□□□ -0.54
RAPGEF3-211ENST00000488250 BAALCQ8WXS3 180 aa11.66□□□□□ -0.54
RAPGEF3-211ENST00000488250 MAST4O15021 2626 aa11.66□□□□□ -0.54
RAPGEF3-211ENST00000488250 IGIPA6NJ69 53 aa11.65□□□□□ -0.54
RAPGEF3-211ENST00000488250 BEAN1Q3B7T3 259 aa11.65□□□□□ -0.54
RAPGEF3-211ENST00000488250 ZC2HC1BQ5TFG8 222 aa11.65□□□□□ -0.54
RAPGEF3-211ENST00000488250 SAP30O75446 220 aa11.64□□□□□ -0.55
RAPGEF3-211ENST00000488250 NMUP48645 174 aa11.64□□□□□ -0.55
RAPGEF3-211ENST00000488250 NSUN5P1Q3KNT7 163 aa11.64□□□□□ -0.55
RAPGEF3-211ENST00000488250 TMEM141Q96I45 108 aa11.64□□□□□ -0.55
RAPGEF3-211ENST00000488250 TIMM17AQ99595 171 aa11.64□□□□□ -0.55
RAPGEF3-211ENST00000488250 CHTOPQ9Y3Y2 248 aaKnown RBP11.64□□□□□ -0.55
RAPGEF3-211ENST00000488250 NDUFA11Q86Y39 141 aa11.64□□□□□ -0.55
RAPGEF3-211ENST00000488250 PCP2Q8IVA1 136 aa11.64□□□□□ -0.55
RAPGEF3-211ENST00000488250 TP53TG1Q9Y2A0 90 aa11.64□□□□□ -0.55
RAPGEF3-211ENST00000488250 NSD1Q96L73 2696 aaPredicted RBP11.64□□□□□ -0.55
RAPGEF3-211ENST00000488250 CUBNO60494 3623 aa11.63□□□□□ -0.55
RAPGEF3-211ENST00000488250 IGKV2D-26A0A0A0MRZ7 120 aa11.63□□□□□ -0.55
RAPGEF3-211ENST00000488250 XCL2Q9UBD3 114 aa11.63□□□□□ -0.55
RAPGEF3-211ENST00000488250 I3L3M4 83 aa11.62□□□□□ -0.55
RAPGEF3-211ENST00000488250 PRM2P04554 102 aa11.62□□□□□ -0.55
RAPGEF3-211ENST00000488250 GTSCR1Q86UQ5 136 aa11.62□□□□□ -0.55
RAPGEF3-211ENST00000488250 C1orf158Q8N1D5 194 aa11.62□□□□□ -0.55
RAPGEF3-211ENST00000488250 PRSS29PA6NIE9 313 aa11.62□□□□□ -0.55
RAPGEF3-211ENST00000488250 RHODO00212 210 aa11.62□□□□□ -0.55
RAPGEF3-211ENST00000488250 TSHBP01222 138 aa11.62□□□□□ -0.55
RAPGEF3-211ENST00000488250 ZNF25P17030 456 aaPredicted RBP11.62□□□□□ -0.55
RAPGEF3-211ENST00000488250 GAGE1Q13065 139 aa11.62□□□□□ -0.55
RAPGEF3-211ENST00000488250 CFAP126Q5VTH2 177 aa11.62□□□□□ -0.55
RAPGEF3-211ENST00000488250 TMEM97Q5BJF2 176 aa11.61□□□□□ -0.55
RAPGEF3-211ENST00000488250 IL17DQ8TAD2 202 aa11.61□□□□□ -0.55
RAPGEF3-211ENST00000488250 TMEM208Q9BTX3 173 aa11.61□□□□□ -0.55
RAPGEF3-211ENST00000488250 HIGD1BQ9P298 99 aa11.61□□□□□ -0.55
RAPGEF3-211ENST00000488250 TCTAP57738 103 aa11.6□□□□□ -0.55
RAPGEF3-211ENST00000488250 KRTAP10-3P60369 221 aa11.6□□□□□ -0.55
RAPGEF3-211ENST00000488250 C19orf73Q9NVV2 129 aa11.6□□□□□ -0.55
RAPGEF3-211ENST00000488250 SETD2Q9BYW2 2564 aaPredicted RBP11.6□□□□□ -0.55
RAPGEF3-211ENST00000488250 F8P00451 2351 aa11.6□□□□□ -0.55
RAPGEF3-211ENST00000488250 RS1O15537 224 aa11.6□□□□□ -0.55
RAPGEF3-211ENST00000488250 HSD52Q0P140 79 aa11.6□□□□□ -0.55
RAPGEF3-211ENST00000488250 ORAOV1Q8WV07 137 aa11.6□□□□□ -0.55
RAPGEF3-211ENST00000488250 WNK1Q9H4A3 2382 aa11.6□□□□□ -0.55
RAPGEF3-211ENST00000488250 P0DMU3 169 aa11.59□□□□□ -0.55
RAPGEF3-211ENST00000488250 FAM231AP0DMU4 169 aa11.59□□□□□ -0.55
RAPGEF3-211ENST00000488250 FAM231CP0DMU5 169 aa11.59□□□□□ -0.55
RAPGEF3-211ENST00000488250 FOSL1P15407 271 aa11.59□□□□□ -0.55
RAPGEF3-211ENST00000488250 RPL39P62891 51 aaKnown RBP11.59□□□□□ -0.55
RAPGEF3-211ENST00000488250 SEC11AP67812 179 aa11.59□□□□□ -0.55
RAPGEF3-211ENST00000488250 PMVKQ15126 192 aa11.59□□□□□ -0.55
RAPGEF3-211ENST00000488250 COX11Q9Y6N1 276 aa11.59□□□□□ -0.55
RAPGEF3-211ENST00000488250 AZU1P20160 251 aa11.58□□□□□ -0.55
RAPGEF3-211ENST00000488250 PAPPA-AS1Q5QFB9 102 aa11.58□□□□□ -0.55
RAPGEF3-211ENST00000488250 C20orf203Q8NBC4 194 aa11.58□□□□□ -0.55
RAPGEF3-211ENST00000488250 IGHV3-53P01767 116 aa11.58□□□□□ -0.56
RAPGEF3-211ENST00000488250 RNASE8Q8TDE3 154 aaKnown RBP11.58□□□□□ -0.56
RAPGEF3-211ENST00000488250 CST9LQ9H4G1 147 aa11.58□□□□□ -0.56
RAPGEF3-211ENST00000488250 IGHV3-73A0A0B4J1V6 119 aa11.57□□□□□ -0.56
RAPGEF3-211ENST00000488250 GIG44P09565 113 aaPredicted RBP11.57□□□□□ -0.56
RAPGEF3-211ENST00000488250 DNAJC30Q96LL9 226 aa11.57□□□□□ -0.56
RAPGEF3-211ENST00000488250 MRPL16Q9NX20 251 aaKnown RBP11.57□□□□□ -0.56
RAPGEF3-211ENST00000488250 INAFM1C9JVW0 142 aa11.56□□□□□ -0.56
RAPGEF3-211ENST00000488250 TNFRSF18Q9Y5U5 241 aa11.56□□□□□ -0.56
RAPGEF3-211ENST00000488250 IGLV4-69A0A075B6H9 119 aa11.56□□□□□ -0.56
RAPGEF3-211ENST00000488250 TAX1BP3O14907 124 aa11.56□□□□□ -0.56
RAPGEF3-211ENST00000488250 Q6ZSN1 163 aa11.56□□□□□ -0.56
RAPGEF3-211ENST00000488250 LINC00482Q8N8I6 264 aa11.56□□□□□ -0.56
RAPGEF3-211ENST00000488250 TMEM263Q8WUH6 116 aaKnown RBP11.56□□□□□ -0.56
RAPGEF3-211ENST00000488250 NACAE9PAV3 2078 aa11.55□□□□□ -0.56
RAPGEF3-211ENST00000488250 TRBV25-1A0A075B6N4 114 aa11.55□□□□□ -0.56
RAPGEF3-211ENST00000488250 E9PLD3 99 aa11.55□□□□□ -0.56
RAPGEF3-211ENST00000488250 DEFB104AQ8WTQ1 72 aa11.55□□□□□ -0.56
RAPGEF3-211ENST00000488250 C1QTNF4Q9BXJ3 329 aa11.54□□□□□ -0.56
RAPGEF3-211ENST00000488250 TTTY13Q9BZ97 58 aa11.54□□□□□ -0.56
RAPGEF3-211ENST00000488250 MAPKAPK5-AS1Q8N8E1 139 aa11.54□□□□□ -0.56
RAPGEF3-211ENST00000488250 OR11H2Q8NH07 326 aa11.54□□□□□ -0.56
RAPGEF3-211ENST00000488250 PYGO1Q9Y3Y4 419 aa11.54□□□□□ -0.56
RAPGEF3-211ENST00000488250 IGHV3OR16-12A0A075B7B8 117 aa11.53□□□□□ -0.56
RAPGEF3-211ENST00000488250 PF4P02776 101 aa11.53□□□□□ -0.56
RAPGEF3-211ENST00000488250 NPSP0C0P6 89 aa11.53□□□□□ -0.56
RAPGEF3-211ENST00000488250 CHAC1Q9BUX1 264 aa11.53□□□□□ -0.56
RAPGEF3-211ENST00000488250 TRAV8-6A0A0B4J262 113 aa11.52□□□□□ -0.56
RAPGEF3-211ENST00000488250 C11orf86A6NJI1 115 aa11.52□□□□□ -0.56
RAPGEF3-211ENST00000488250 DAZ2Q13117 558 aaKnown RBP11.52□□□□□ -0.56
RAPGEF3-211ENST00000488250 WFDC10AQ9H1F0 79 aa11.52□□□□□ -0.56
RAPGEF3-211ENST00000488250 A6NDN8 102 aa11.52□□□□□ -0.57
RAPGEF3-211ENST00000488250 Q6ZVH6 145 aa11.52□□□□□ -0.57
RAPGEF3-211ENST00000488250 CSNK1G2-AS1Q8NCQ2 148 aa11.52□□□□□ -0.57
RAPGEF3-211ENST00000488250 NIPBLQ6KC79 2804 aaeCLIP11.52□□□□□ -0.57
RAPGEF3-211ENST00000488250 CRYBA4P53673 196 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms