RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 TRAV10A0A0B4J240 114 aa9.13□□□□□ -0.95
CHD3-210ENST00000479080 PHLDA1Q8WV24 401 aaPredicted RBP9.13□□□□□ -0.95
CHD3-210ENST00000479080 FRZBQ92765 325 aa9.13□□□□□ -0.95
CHD3-210ENST00000479080 HHLA3Q9XRX5 114 aa9.13□□□□□ -0.95
CHD3-210ENST00000479080 RHOHQ15669 191 aa9.12□□□□□ -0.95
CHD3-210ENST00000479080 PRELID3AQ96N28 172 aa9.12□□□□□ -0.95
CHD3-210ENST00000479080 VPS13DQ5THJ4 4388 aa9.12□□□□□ -0.95
CHD3-210ENST00000479080 TRBV6-5A0A0K0K1A5 114 aa9.11□□□□□ -0.95
CHD3-210ENST00000479080 GAGE12JA6NER3 117 aa9.11□□□□□ -0.95
CHD3-210ENST00000479080 PAX4O43316 350 aa9.11□□□□□ -0.95
CHD3-210ENST00000479080 TNFRSF6BO95407 300 aa9.11□□□□□ -0.95
CHD3-210ENST00000479080 SRIP30626 198 aa9.11□□□□□ -0.95
CHD3-210ENST00000479080 CKS2P33552 79 aa9.11□□□□□ -0.95
CHD3-210ENST00000479080 GAGE1Q13065 139 aa9.11□□□□□ -0.95
CHD3-210ENST00000479080 GAGE4Q13068 117 aa9.11□□□□□ -0.95
CHD3-210ENST00000479080 GAGE5Q13069 117 aa9.11□□□□□ -0.95
CHD3-210ENST00000479080 GAGE13Q4V321 117 aa9.11□□□□□ -0.95
CHD3-210ENST00000479080 NEGR1Q7Z3B1 354 aa9.11□□□□□ -0.95
CHD3-210ENST00000479080 ORMDL3Q8N138 153 aa9.11□□□□□ -0.95
CHD3-210ENST00000479080 IGLV2-18A0A075B6J9 118 aa9.1□□□□□ -0.95
CHD3-210ENST00000479080 A0A096LPF7 62 aa9.1□□□□□ -0.95
CHD3-210ENST00000479080 TRBV10-1A0A0K0K1A3 114 aa9.1□□□□□ -0.95
CHD3-210ENST00000479080 GYPEP15421 78 aa9.1□□□□□ -0.95
CHD3-210ENST00000479080 UBE2D3P61077 147 aa9.1□□□□□ -0.95
CHD3-210ENST00000479080 UBE2D2P62837 147 aa9.1□□□□□ -0.95
CHD3-210ENST00000479080 IQCJQ1A5X6 159 aa9.1□□□□□ -0.95
CHD3-210ENST00000479080 OR10J3Q5JRS4 329 aa9.1□□□□□ -0.95
CHD3-210ENST00000479080 URB1-AS1Q96HZ7 61 aa9.1□□□□□ -0.95
CHD3-210ENST00000479080 NIT2Q9NQR4 276 aa9.1□□□□□ -0.95
CHD3-210ENST00000479080 DNAH1Q9P2D7 4330 aa9.09□□□□□ -0.95
CHD3-210ENST00000479080 PPBPP02775 128 aa9.09□□□□□ -0.95
CHD3-210ENST00000479080 POLR2KP53803 58 aaKnown RBP9.09□□□□□ -0.95
CHD3-210ENST00000479080 ZNRF2Q8NHG8 242 aa9.09□□□□□ -0.95
CHD3-210ENST00000479080 DEFB104AQ8WTQ1 72 aa9.09□□□□□ -0.95
CHD3-210ENST00000479080 PRSS47A8MTI9 375 aa9.08□□□□□ -0.96
CHD3-210ENST00000479080 H3BNG1 76 aa9.08□□□□□ -0.96
CHD3-210ENST00000479080 LINC00310P59036 64 aa9.08□□□□□ -0.96
CHD3-210ENST00000479080 CEMP1Q6PRD7 247 aaPredicted RBP9.08□□□□□ -0.96
CHD3-210ENST00000479080 C18orf32Q8TCD1 76 aa9.08□□□□□ -0.96
CHD3-210ENST00000479080 PRADC1Q9BSG0 188 aa9.08□□□□□ -0.96
CHD3-210ENST00000479080 TMEM70Q9BUB7 260 aa9.08□□□□□ -0.96
CHD3-210ENST00000479080 IGHV3-38A0A0C4DH36 116 aa9.07□□□□□ -0.96
CHD3-210ENST00000479080 SDHAF1A6NFY7 115 aa9.07□□□□□ -0.96
CHD3-210ENST00000479080 H7C1H1 209 aa9.07□□□□□ -0.96
CHD3-210ENST00000479080 SUMO2P61956 95 aaKnown RBP9.07□□□□□ -0.96
CHD3-210ENST00000479080 DNAJC30Q96LL9 226 aa9.07□□□□□ -0.96
CHD3-210ENST00000479080 ALMS1Q8TCU4 4167 aa9.06□□□□□ -0.96
CHD3-210ENST00000479080 TRBV7-3A0A075B6L6 115 aa9.06□□□□□ -0.96
CHD3-210ENST00000479080 HIST1H2BKO60814 126 aa9.06□□□□□ -0.96
CHD3-210ENST00000479080 HIST1H2BJP06899 126 aa9.06□□□□□ -0.96
CHD3-210ENST00000479080 HIST1H2BOP23527 126 aa9.06□□□□□ -0.96
CHD3-210ENST00000479080 HIST1H2BBP33778 126 aa9.06□□□□□ -0.96
CHD3-210ENST00000479080 HIST1H2BDP58876 126 aa9.06□□□□□ -0.96
CHD3-210ENST00000479080 HIST1H2BCP62807 126 aa9.06□□□□□ -0.96
CHD3-210ENST00000479080 RPL32P62910 135 aaKnown RBP9.06□□□□□ -0.96
CHD3-210ENST00000479080 RPL36AP83881 106 aaKnown RBP9.06□□□□□ -0.96
CHD3-210ENST00000479080 HIST2H2BEQ16778 126 aa9.06□□□□□ -0.96
CHD3-210ENST00000479080 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.06□□□□□ -0.96
CHD3-210ENST00000479080 ZFAND6Q6FIF0 208 aa9.06□□□□□ -0.96
CHD3-210ENST00000479080 NTM-AS1Q6ZSK4 140 aa9.06□□□□□ -0.96
CHD3-210ENST00000479080 HIST1H2BHQ93079 126 aa9.06□□□□□ -0.96
CHD3-210ENST00000479080 RPL36ALQ969Q0 106 aaKnown RBP9.06□□□□□ -0.96
CHD3-210ENST00000479080 WWC2-AS2Q96NR7 200 aa9.06□□□□□ -0.96
CHD3-210ENST00000479080 HIST1H2BNQ99877 126 aa9.06□□□□□ -0.96
CHD3-210ENST00000479080 HIST1H2BMQ99879 126 aa9.06□□□□□ -0.96
CHD3-210ENST00000479080 C20orf78Q9BR46 151 aa9.06□□□□□ -0.96
CHD3-210ENST00000479080 SMIM2Q9BVW6 85 aa9.06□□□□□ -0.96
CHD3-210ENST00000479080 ST20Q9HBF5 79 aa9.06□□□□□ -0.96
CHD3-210ENST00000479080 APLNQ9ULZ1 77 aa9.06□□□□□ -0.96
CHD3-210ENST00000479080 LAMTOR2Q9Y2Q5 125 aa9.06□□□□□ -0.96
CHD3-210ENST00000479080 TRBV27A0A0K0K1C4 114 aa9.05□□□□□ -0.96
CHD3-210ENST00000479080 LOC389332A0A1B0GUA5 103 aa9.05□□□□□ -0.96
CHD3-210ENST00000479080 IGLL5B9A064 214 aa9.05□□□□□ -0.96
CHD3-210ENST00000479080 TSHBP01222 138 aa9.05□□□□□ -0.96
CHD3-210ENST00000479080 MUC7Q8TAX7 377 aa9.05□□□□□ -0.96
CHD3-210ENST00000479080 TNFRSF18Q9Y5U5 241 aa9.05□□□□□ -0.96
CHD3-210ENST00000479080 ICOSQ9Y6W8 199 aa9.05□□□□□ -0.96
CHD3-210ENST00000479080 NUDT3O95989 172 aa9.04□□□□□ -0.96
CHD3-210ENST00000479080 IFI27P40305 119 aaPredicted RBP9.04□□□□□ -0.96
CHD3-210ENST00000479080 LYSTQ99698 3801 aa9.03□□□□□ -0.96
CHD3-210ENST00000479080 NUPR1O60356 82 aa9.03□□□□□ -0.96
CHD3-210ENST00000479080 Q0VG73 95 aa9.03□□□□□ -0.96
CHD3-210ENST00000479080 MRPL23Q16540 153 aaKnown RBP9.03□□□□□ -0.96
CHD3-210ENST00000479080 Q8N8P6 123 aa9.03□□□□□ -0.96
CHD3-210ENST00000479080 ATP6V0E2Q8NHE4 81 aa9.03□□□□□ -0.96
CHD3-210ENST00000479080 MAP1LC3AQ9H492 121 aa9.03□□□□□ -0.96
CHD3-210ENST00000479080 SACSQ9NZJ4 4579 aa9.03□□□□□ -0.96
CHD3-210ENST00000479080 NUPR2A6NF83 97 aa9.02□□□□□ -0.97
CHD3-210ENST00000479080 LINC01546A6NGU7 62 aa9.02□□□□□ -0.97
CHD3-210ENST00000479080 C1orf196B1AJZ1 125 aa9.02□□□□□ -0.97
CHD3-210ENST00000479080 TCAPO15273 167 aa9.02□□□□□ -0.97
CHD3-210ENST00000479080 PPP1R17O96001 155 aa9.02□□□□□ -0.97
CHD3-210ENST00000479080 C15orf53Q8NAA6 179 aa9.02□□□□□ -0.97
CHD3-210ENST00000479080 CHCHD7Q9BUK0 85 aa9.02□□□□□ -0.97
CHD3-210ENST00000479080 A0A096LNJ9 63 aa9.01□□□□□ -0.97
CHD3-210ENST00000479080 ESRGQ1W209 222 aa9.01□□□□□ -0.97
CHD3-210ENST00000479080 LYPD5Q6UWN5 251 aa9.01□□□□□ -0.97
CHD3-210ENST00000479080 I3L3M4 83 aa9□□□□□ -0.97
CHD3-210ENST00000479080 VCYO14598 125 aa9□□□□□ -0.97
CHD3-210ENST00000479080 ESDP10768 282 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms