RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 DNAH6Q9C0G6 4158 aa2.16□□□□□ -2.06
CDC42BPA-212ENST00000478573 HUWE1Q7Z6Z7 4374 aaKnown RBP2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 TMEM213A2RRL7 107 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 C2orf70A6NJV1 201 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 E7EUB6 86 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 C3orf84H3BNL1 204 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 H3BQ15 152 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 K7EIM0 57 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 M0R036 132 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 NDUFA4O00483 81 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 HIST1H2BKO60814 126 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 IFNA5P01569 189 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 PRH1P02810 166 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 REG1AP05451 166 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 HIST1H2BJP06899 126 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 PFN1P07737 140 aaKnown RBP2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 C8orf88P0DMB2 117 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 APELAP0DMC3 54 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 ESDP10768 282 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 DEFA4P12838 97 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 HIST1H2BOP23527 126 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 HIST1H2BBP33778 126 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 AKR1C2P52895 323 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 PIGPP57054 158 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 HIST1H2BDP58876 126 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 RPS20P60866 119 aaKnown RBP2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 HIST1H2BCP62807 126 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 HBG1P69891 147 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 HBG2P69892 147 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 WT1-ASQ06250 92 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 HIST2H2BEQ16778 126 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 IQCJQ1A5X6 159 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 NMSQ5H8A3 153 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 AKR1C8PQ5T2L2 129 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 PRR9Q5T870 116 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 SPINT4Q6UDR6 99 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 CYP2G1PQ6ZSU1 146 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 FAM24BQ8N5W8 94 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 OR1P1Q8NH06 330 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 HIST1H2BHQ93079 126 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 C14orf144Q96I85 54 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 METTL26Q96S19 204 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 HIST1H2BNQ99877 126 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 HIST1H2BMQ99879 126 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 MANBALQ9NQG1 85 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 MRPL27Q9P0M9 148 aaKnown RBP2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 NAT8Q9UHE5 227 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 UFC1Q9Y3C8 167 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 LY96Q9Y6Y9 160 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 CSMD3Q7Z407 3707 aa2.15□□□□□ -2.07
CDC42BPA-212ENST00000478573 DYNC2H1Q8NCM8 4307 aaKnown RBP2.14□□□□□ -2.07
CDC42BPA-212ENST00000478573 TRAV2A0A0B4J234 112 aa2.14□□□□□ -2.07
CDC42BPA-212ENST00000478573 TRAV3A0A0B4J244 114 aa2.14□□□□□ -2.07
CDC42BPA-212ENST00000478573 C3orf85A0A1B0GTC6 90 aa2.14□□□□□ -2.07
CDC42BPA-212ENST00000478573 TEX50A0A1B0GTY4 177 aa2.14□□□□□ -2.07
CDC42BPA-212ENST00000478573 C20orf202A1L168 122 aa2.14□□□□□ -2.07
CDC42BPA-212ENST00000478573 C9JQL5 133 aa2.14□□□□□ -2.07
CDC42BPA-212ENST00000478573 FNDC10F2Z333 226 aa2.14□□□□□ -2.07
CDC42BPA-212ENST00000478573 I3L2K1 104 aa2.14□□□□□ -2.07
CDC42BPA-212ENST00000478573 M0R143 59 aa2.14□□□□□ -2.07
CDC42BPA-212ENST00000478573 PDE6DO43924 150 aa2.14□□□□□ -2.07
CDC42BPA-212ENST00000478573 IGKV1-5P01602 117 aa2.14□□□□□ -2.07
CDC42BPA-212ENST00000478573 MT-ND6P03923 174 aa2.14□□□□□ -2.07
CDC42BPA-212ENST00000478573 OR13C7P0DN81 318 aa2.14□□□□□ -2.07
CDC42BPA-212ENST00000478573 RNASE2P10153 161 aaKnown RBP2.14□□□□□ -2.07
CDC42BPA-212ENST00000478573 BCL2P10415 239 aa2.14□□□□□ -2.07
CDC42BPA-212ENST00000478573 ATP6V0CP27449 155 aa2.14□□□□□ -2.07
CDC42BPA-212ENST00000478573 G6PCP35575 357 aa2.14□□□□□ -2.07
CDC42BPA-212ENST00000478573 PSMB3P49720 205 aa2.14□□□□□ -2.07
CDC42BPA-212ENST00000478573 S100A10P60903 97 aa2.14□□□□□ -2.07
CDC42BPA-212ENST00000478573 HSPE1P61604 102 aaKnown RBP2.14□□□□□ -2.07
CDC42BPA-212ENST00000478573 ERHP84090 104 aaKnown RBP2.14□□□□□ -2.07
CDC42BPA-212ENST00000478573 DEFB114Q30KQ6 69 aa2.14□□□□□ -2.07
CDC42BPA-212ENST00000478573 BSXQ3C1V8 233 aa2.14□□□□□ -2.07
CDC42BPA-212ENST00000478573 DEFB121Q5J5C9 76 aa2.14□□□□□ -2.07
CDC42BPA-212ENST00000478573 C1orf194Q5T5A4 169 aa2.14□□□□□ -2.07
CDC42BPA-212ENST00000478573 LINC00322Q6ZN03 302 aaPredicted RBP2.14□□□□□ -2.07
CDC42BPA-212ENST00000478573 FAM231DQ6ZW35 169 aa2.14□□□□□ -2.07
CDC42BPA-212ENST00000478573 OR2D3Q8NGH3 330 aa2.14□□□□□ -2.07
CDC42BPA-212ENST00000478573 Q8WTZ3 238 aa2.14□□□□□ -2.07
CDC42BPA-212ENST00000478573 CIB3Q96Q77 187 aaPredicted RBP2.14□□□□□ -2.07
CDC42BPA-212ENST00000478573 TP53RKQ96S44 253 aa2.14□□□□□ -2.07
CDC42BPA-212ENST00000478573 HIST1H2BLQ99880 126 aa2.14□□□□□ -2.07
CDC42BPA-212ENST00000478573 DAZ1Q9NQZ3 744 aaKnown RBP2.14□□□□□ -2.07
CDC42BPA-212ENST00000478573 KCNIP2Q9NS61 270 aa2.14□□□□□ -2.07
CDC42BPA-212ENST00000478573 GSKIPQ9P0R6 139 aa2.14□□□□□ -2.07
CDC42BPA-212ENST00000478573 TP53TG1Q9Y2A0 90 aa2.14□□□□□ -2.07
CDC42BPA-212ENST00000478573 NBEAL2Q6ZNJ1 2754 aa2.13□□□□□ -2.07
CDC42BPA-212ENST00000478573 STARD9Q9P2P6 4700 aa2.13□□□□□ -2.07
CDC42BPA-212ENST00000478573 TRAV30A0A087WSZ9 112 aa2.13□□□□□ -2.07
CDC42BPA-212ENST00000478573 CTXND1A0A1B0GTU2 59 aa2.13□□□□□ -2.07
CDC42BPA-212ENST00000478573 MAP1LC3B2A6NCE7 125 aa2.13□□□□□ -2.07
CDC42BPA-212ENST00000478573 IZUMO1RA6ND01 250 aa2.13□□□□□ -2.07
CDC42BPA-212ENST00000478573 OR4C46A6NHA9 309 aa2.13□□□□□ -2.07
CDC42BPA-212ENST00000478573 F6UZH7 168 aa2.13□□□□□ -2.07
CDC42BPA-212ENST00000478573 GNG7O60262 68 aa2.13□□□□□ -2.07
CDC42BPA-212ENST00000478573 MT-CO2P00403 227 aa2.13□□□□□ -2.07
CDC42BPA-212ENST00000478573 KRASP01116 189 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms