RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 FAM231AP0DMU4 169 aa12.29□□□□□ -0.44
SREBF1-211ENST00000476994 FAM231CP0DMU5 169 aa12.29□□□□□ -0.44
SREBF1-211ENST00000476994 COX19Q49B96 90 aa12.29□□□□□ -0.44
SREBF1-211ENST00000476994 TRAV26-1A0A087WT03 109 aa12.28□□□□□ -0.44
SREBF1-211ENST00000476994 TRAV26-2A0A0B4J265 109 aa12.28□□□□□ -0.44
SREBF1-211ENST00000476994 HLA-DQA1P01909 254 aa12.28□□□□□ -0.44
SREBF1-211ENST00000476994 LINC00694P0DN24 101 aa12.28□□□□□ -0.44
SREBF1-211ENST00000476994 FRZBQ92765 325 aa12.28□□□□□ -0.44
SREBF1-211ENST00000476994 LOC100131303A0A0U1RQF7 123 aa12.27□□□□□ -0.45
SREBF1-211ENST00000476994 F5H697 171 aa12.27□□□□□ -0.45
SREBF1-211ENST00000476994 RHOHQ15669 191 aa12.27□□□□□ -0.45
SREBF1-211ENST00000476994 MRAP2Q96G30 205 aa12.27□□□□□ -0.45
SREBF1-211ENST00000476994 APLNQ9ULZ1 77 aa12.27□□□□□ -0.45
SREBF1-211ENST00000476994 A0A0J9YY99 117 aa12.26□□□□□ -0.45
SREBF1-211ENST00000476994 H3BNG1 76 aa12.26□□□□□ -0.45
SREBF1-211ENST00000476994 PAX4O43316 350 aa12.26□□□□□ -0.45
SREBF1-211ENST00000476994 MT-ND6P03923 174 aa12.26□□□□□ -0.45
SREBF1-211ENST00000476994 RPS10P46783 165 aaKnown RBP12.26□□□□□ -0.45
SREBF1-211ENST00000476994 NEXN-AS1Q8NBZ9 246 aa12.26□□□□□ -0.45
SREBF1-211ENST00000476994 VPS13DQ5THJ4 4388 aa12.25□□□□□ -0.45
SREBF1-211ENST00000476994 TRBV10-1A0A0K0K1A3 114 aa12.25□□□□□ -0.45
SREBF1-211ENST00000476994 SMKR1H3BMG3 65 aa12.25□□□□□ -0.45
SREBF1-211ENST00000476994 NCR2O95944 276 aa12.25□□□□□ -0.45
SREBF1-211ENST00000476994 NRACQ8N912 160 aa12.25□□□□□ -0.45
SREBF1-211ENST00000476994 RPL39LQ96EH5 51 aaKnown RBP12.25□□□□□ -0.45
SREBF1-211ENST00000476994 MRPL18Q9H0U6 180 aaKnown RBP12.24□□□□□ -0.45
SREBF1-211ENST00000476994 D6R8Y8 96 aa12.23□□□□□ -0.45
SREBF1-211ENST00000476994 H7C1H1 209 aa12.23□□□□□ -0.45
SREBF1-211ENST00000476994 PHOX2AO14813 284 aa12.23□□□□□ -0.45
SREBF1-211ENST00000476994 GYPEP15421 78 aa12.23□□□□□ -0.45
SREBF1-211ENST00000476994 RAB5AP20339 215 aa12.23□□□□□ -0.45
SREBF1-211ENST00000476994 PRADC1Q9BSG0 188 aa12.23□□□□□ -0.45
SREBF1-211ENST00000476994 A0A096LPF7 62 aa12.22□□□□□ -0.45
SREBF1-211ENST00000476994 TRBV6-5A0A0K0K1A5 114 aa12.22□□□□□ -0.45
SREBF1-211ENST00000476994 APCSP02743 223 aa12.22□□□□□ -0.45
SREBF1-211ENST00000476994 NIT2Q9NQR4 276 aa12.22□□□□□ -0.45
SREBF1-211ENST00000476994 DNAH10Q8IVF4 4471 aa12.21□□□□□ -0.45
SREBF1-211ENST00000476994 PPBPP02775 128 aa12.21□□□□□ -0.45
SREBF1-211ENST00000476994 CKS2P33552 79 aa12.21□□□□□ -0.45
SREBF1-211ENST00000476994 UBE2D3P61077 147 aa12.21□□□□□ -0.45
SREBF1-211ENST00000476994 UBE2D2P62837 147 aa12.21□□□□□ -0.45
SREBF1-211ENST00000476994 KIAA1644Q3SXP7 199 aa12.21□□□□□ -0.45
SREBF1-211ENST00000476994 DNAJC30Q96LL9 226 aa12.21□□□□□ -0.45
SREBF1-211ENST00000476994 TRAPPC1Q9Y5R8 145 aa12.21□□□□□ -0.45
SREBF1-211ENST00000476994 TRBV7-3A0A075B6L6 115 aa12.2□□□□□ -0.46
SREBF1-211ENST00000476994 GAGE12JA6NER3 117 aa12.2□□□□□ -0.46
SREBF1-211ENST00000476994 NPYP01303 97 aa12.2□□□□□ -0.46
SREBF1-211ENST00000476994 FABP9Q0Z7S8 132 aa12.2□□□□□ -0.46
SREBF1-211ENST00000476994 GAGE1Q13065 139 aa12.2□□□□□ -0.46
SREBF1-211ENST00000476994 GAGE4Q13068 117 aa12.2□□□□□ -0.46
SREBF1-211ENST00000476994 GAGE5Q13069 117 aa12.2□□□□□ -0.46
SREBF1-211ENST00000476994 GAGE13Q4V321 117 aa12.2□□□□□ -0.46
SREBF1-211ENST00000476994 LINC00336Q6ZUF6 198 aa12.2□□□□□ -0.46
SREBF1-211ENST00000476994 ORMDL3Q8N138 153 aa12.2□□□□□ -0.46
SREBF1-211ENST00000476994 OR10J3Q5JRS4 329 aa12.19□□□□□ -0.46
SREBF1-211ENST00000476994 C15orf53Q8NAA6 179 aa12.19□□□□□ -0.46
SREBF1-211ENST00000476994 ZNRF2Q8NHG8 242 aa12.19□□□□□ -0.46
SREBF1-211ENST00000476994 PRELID3AQ96N28 172 aa12.19□□□□□ -0.46
SREBF1-211ENST00000476994 ICOSQ9Y6W8 199 aa12.19□□□□□ -0.46
SREBF1-211ENST00000476994 DNAH6Q9C0G6 4158 aa12.18□□□□□ -0.46
SREBF1-211ENST00000476994 TNFRSF6BO95407 300 aa12.18□□□□□ -0.46
SREBF1-211ENST00000476994 POLR2KP53803 58 aaKnown RBP12.18□□□□□ -0.46
SREBF1-211ENST00000476994 RPL36AP83881 106 aaKnown RBP12.18□□□□□ -0.46
SREBF1-211ENST00000476994 MRPL23Q16540 153 aaKnown RBP12.18□□□□□ -0.46
SREBF1-211ENST00000476994 RPL36ALQ969Q0 106 aaKnown RBP12.18□□□□□ -0.46
SREBF1-211ENST00000476994 ALKBH7Q9BT30 221 aaPredicted RBP12.18□□□□□ -0.46
SREBF1-211ENST00000476994 LAMTOR2Q9Y2Q5 125 aa12.17□□□□□ -0.46
SREBF1-211ENST00000476994 SDHAF1A6NFY7 115 aa12.16□□□□□ -0.46
SREBF1-211ENST00000476994 PRSS47A8MTI9 375 aa12.16□□□□□ -0.46
SREBF1-211ENST00000476994 NUDT3O95989 172 aa12.16□□□□□ -0.46
SREBF1-211ENST00000476994 PPP1R17O96001 155 aa12.16□□□□□ -0.46
SREBF1-211ENST00000476994 TRGC2P03986 189 aa12.16□□□□□ -0.46
SREBF1-211ENST00000476994 SRIP30626 198 aa12.16□□□□□ -0.46
SREBF1-211ENST00000476994 SUMO2P61956 95 aaKnown RBP12.16□□□□□ -0.46
SREBF1-211ENST00000476994 RPL32P62910 135 aaKnown RBP12.16□□□□□ -0.46
SREBF1-211ENST00000476994 C20orf78Q9BR46 151 aa12.16□□□□□ -0.46
SREBF1-211ENST00000476994 TMEM70Q9BUB7 260 aa12.16□□□□□ -0.46
SREBF1-211ENST00000476994 ST20Q9HBF5 79 aa12.15□□□□□ -0.46
SREBF1-211ENST00000476994 TNFRSF18Q9Y5U5 241 aa12.15□□□□□ -0.46
SREBF1-211ENST00000476994 IGLV2-18A0A075B6J9 118 aa12.14□□□□□ -0.47
SREBF1-211ENST00000476994 NEGR1Q7Z3B1 354 aa12.14□□□□□ -0.47
SREBF1-211ENST00000476994 UBE2DNLQ8IWF7 75 aa12.14□□□□□ -0.47
SREBF1-211ENST00000476994 ATP6V0E2Q8NHE4 81 aa12.14□□□□□ -0.47
SREBF1-211ENST00000476994 IGHV3-38A0A0C4DH36 116 aa12.13□□□□□ -0.47
SREBF1-211ENST00000476994 TRBV27A0A0K0K1C4 114 aa12.13□□□□□ -0.47
SREBF1-211ENST00000476994 TIRAPP58753 221 aa12.13□□□□□ -0.47
SREBF1-211ENST00000476994 SH2D6Q7Z4S9 175 aa12.13□□□□□ -0.47
SREBF1-211ENST00000476994 DAZ4Q86SG3 579 aaKnown RBP12.13□□□□□ -0.47
SREBF1-211ENST00000476994 SMIM2Q9BVW6 85 aa12.13□□□□□ -0.47
SREBF1-211ENST00000476994 DAZ3Q9NR90 486 aaKnown RBP12.13□□□□□ -0.47
SREBF1-211ENST00000476994 HECTD4Q9Y4D8 3996 aa12.12□□□□□ -0.47
SREBF1-211ENST00000476994 ESRGQ1W209 222 aa12.12□□□□□ -0.47
SREBF1-211ENST00000476994 NTM-AS1Q6ZSK4 140 aa12.12□□□□□ -0.47
SREBF1-211ENST00000476994 LYPD5Q6UWN5 251 aa12.11□□□□□ -0.47
SREBF1-211ENST00000476994 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.11□□□□□ -0.47
SREBF1-211ENST00000476994 C18orf32Q8TCD1 76 aa12.11□□□□□ -0.47
SREBF1-211ENST00000476994 GTSF1LQ9H1H1 148 aa12.11□□□□□ -0.47
SREBF1-211ENST00000476994 TSHBP01222 138 aa12.1□□□□□ -0.47
SREBF1-211ENST00000476994 MAP1LC3AQ9H492 121 aa12.1□□□□□ -0.47
SREBF1-211ENST00000476994 PRSS29PA6NIE9 313 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms