RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 MRPL18Q9H0U6 180 aaKnown RBP6.83□□□□□ -1.32
SF3A1-207ENST00000471342 PRO0255Q9UI72 69 aa6.83□□□□□ -1.32
SF3A1-207ENST00000471342 TRAV26-1A0A087WT03 109 aa6.82□□□□□ -1.32
SF3A1-207ENST00000471342 TRAV10A0A0B4J240 114 aa6.82□□□□□ -1.32
SF3A1-207ENST00000471342 D6R8Y8 96 aa6.82□□□□□ -1.32
SF3A1-207ENST00000471342 K7EQD1 137 aa6.82□□□□□ -1.32
SF3A1-207ENST00000471342 RHODO00212 210 aa6.82□□□□□ -1.32
SF3A1-207ENST00000471342 TRGC2P03986 189 aa6.82□□□□□ -1.32
SF3A1-207ENST00000471342 S100PP25815 95 aa6.82□□□□□ -1.32
SF3A1-207ENST00000471342 UBE2D3P61077 147 aa6.82□□□□□ -1.32
SF3A1-207ENST00000471342 UBE2D2P62837 147 aa6.82□□□□□ -1.32
SF3A1-207ENST00000471342 CEMP1Q6PRD7 247 aaPredicted RBP6.82□□□□□ -1.32
SF3A1-207ENST00000471342 FRZBQ92765 325 aa6.82□□□□□ -1.32
SF3A1-207ENST00000471342 FAM104AQ969W3 186 aa6.82□□□□□ -1.32
SF3A1-207ENST00000471342 A0A0J9YY99 117 aa6.81□□□□□ -1.32
SF3A1-207ENST00000471342 TRBV10-1A0A0K0K1A3 114 aa6.81□□□□□ -1.32
SF3A1-207ENST00000471342 LINC01546A6NGU7 62 aa6.81□□□□□ -1.32
SF3A1-207ENST00000471342 F5H768 121 aa6.81□□□□□ -1.32
SF3A1-207ENST00000471342 HLA-DQA1P01909 254 aa6.81□□□□□ -1.32
SF3A1-207ENST00000471342 FABP9Q0Z7S8 132 aa6.81□□□□□ -1.32
SF3A1-207ENST00000471342 MRAP2Q96G30 205 aa6.81□□□□□ -1.32
SF3A1-207ENST00000471342 DNAH10Q8IVF4 4471 aa6.81□□□□□ -1.32
SF3A1-207ENST00000471342 NUPR1O60356 82 aa6.8□□□□□ -1.32
SF3A1-207ENST00000471342 TNFRSF6BO95407 300 aa6.8□□□□□ -1.32
SF3A1-207ENST00000471342 APCSP02743 223 aa6.8□□□□□ -1.32
SF3A1-207ENST00000471342 MGPP08493 103 aa6.8□□□□□ -1.32
SF3A1-207ENST00000471342 RPL32P62910 135 aaKnown RBP6.8□□□□□ -1.32
SF3A1-207ENST00000471342 NEGR1Q7Z3B1 354 aa6.8□□□□□ -1.32
SF3A1-207ENST00000471342 TMEM70Q9BUB7 260 aa6.8□□□□□ -1.32
SF3A1-207ENST00000471342 NIT2Q9NQR4 276 aa6.8□□□□□ -1.32
SF3A1-207ENST00000471342 DNAH17Q9UFH2 4485 aa6.79□□□□□ -1.32
SF3A1-207ENST00000471342 TENM2Q9NT68 2774 aa6.79□□□□□ -1.32
SF3A1-207ENST00000471342 A0A096LNJ9 63 aa6.79□□□□□ -1.32
SF3A1-207ENST00000471342 TRGV4A0A0C4DH28 118 aa6.79□□□□□ -1.32
SF3A1-207ENST00000471342 TRBV27A0A0K0K1C4 114 aa6.79□□□□□ -1.32
SF3A1-207ENST00000471342 GAGE12JA6NER3 117 aa6.79□□□□□ -1.32
SF3A1-207ENST00000471342 PAX4O43316 350 aa6.79□□□□□ -1.32
SF3A1-207ENST00000471342 MT-ND6P03923 174 aa6.79□□□□□ -1.32
SF3A1-207ENST00000471342 GYPEP15421 78 aa6.79□□□□□ -1.32
SF3A1-207ENST00000471342 HTN3P15516 51 aa6.79□□□□□ -1.32
SF3A1-207ENST00000471342 GAGE1Q13065 139 aa6.79□□□□□ -1.32
SF3A1-207ENST00000471342 GAGE4Q13068 117 aa6.79□□□□□ -1.32
SF3A1-207ENST00000471342 GAGE5Q13069 117 aa6.79□□□□□ -1.32
SF3A1-207ENST00000471342 ESRGQ1W209 222 aa6.79□□□□□ -1.32
SF3A1-207ENST00000471342 COX19Q49B96 90 aa6.79□□□□□ -1.32
SF3A1-207ENST00000471342 GAGE13Q4V321 117 aa6.79□□□□□ -1.32
SF3A1-207ENST00000471342 MUC7Q8TAX7 377 aa6.79□□□□□ -1.32
SF3A1-207ENST00000471342 WWC2-AS2Q96NR7 200 aa6.79□□□□□ -1.32
SF3A1-207ENST00000471342 TRAPPC1Q9Y5R8 145 aa6.79□□□□□ -1.32
SF3A1-207ENST00000471342 TRBV7-3A0A075B6L6 115 aa6.78□□□□□ -1.32
SF3A1-207ENST00000471342 TSHBP01222 138 aa6.78□□□□□ -1.32
SF3A1-207ENST00000471342 S100A8P05109 93 aa6.78□□□□□ -1.32
SF3A1-207ENST00000471342 ESDP10768 282 aa6.78□□□□□ -1.32
SF3A1-207ENST00000471342 RHOHQ15669 191 aa6.78□□□□□ -1.32
SF3A1-207ENST00000471342 ZNF56Q15929 161 aa6.78□□□□□ -1.32
SF3A1-207ENST00000471342 IQCJQ1A5X6 159 aa6.78□□□□□ -1.32
SF3A1-207ENST00000471342 LYPD5Q6UWN5 251 aa6.78□□□□□ -1.32
SF3A1-207ENST00000471342 ZNRF2Q8NHG8 242 aa6.78□□□□□ -1.32
SF3A1-207ENST00000471342 C18orf32Q8TCD1 76 aa6.78□□□□□ -1.32
SF3A1-207ENST00000471342 DEFB104AQ8WTQ1 72 aa6.78□□□□□ -1.32
SF3A1-207ENST00000471342 BORCS7Q96B45 105 aa6.78□□□□□ -1.32
SF3A1-207ENST00000471342 PRELID3AQ96N28 172 aa6.78□□□□□ -1.32
SF3A1-207ENST00000471342 CHCHD7Q9BUK0 85 aa6.78□□□□□ -1.32
SF3A1-207ENST00000471342 F5H697 171 aa6.77□□□□□ -1.33
SF3A1-207ENST00000471342 HIST1H2BKO60814 126 aa6.77□□□□□ -1.33
SF3A1-207ENST00000471342 PPBPP02775 128 aa6.77□□□□□ -1.33
SF3A1-207ENST00000471342 HIST1H2BJP06899 126 aa6.77□□□□□ -1.33
SF3A1-207ENST00000471342 HIST1H2BOP23527 126 aa6.77□□□□□ -1.33
SF3A1-207ENST00000471342 HIST1H2BBP33778 126 aa6.77□□□□□ -1.33
SF3A1-207ENST00000471342 TIRAPP58753 221 aa6.77□□□□□ -1.33
SF3A1-207ENST00000471342 HIST1H2BDP58876 126 aa6.77□□□□□ -1.33
SF3A1-207ENST00000471342 HIST1H2BCP62807 126 aa6.77□□□□□ -1.33
SF3A1-207ENST00000471342 HIST2H2BEQ16778 126 aa6.77□□□□□ -1.33
SF3A1-207ENST00000471342 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.77□□□□□ -1.33
SF3A1-207ENST00000471342 CASC10Q5T4H9 136 aa6.77□□□□□ -1.33
SF3A1-207ENST00000471342 ZFAND6Q6FIF0 208 aa6.77□□□□□ -1.33
SF3A1-207ENST00000471342 ORMDL3Q8N138 153 aa6.77□□□□□ -1.33
SF3A1-207ENST00000471342 HIST1H2BHQ93079 126 aa6.77□□□□□ -1.33
SF3A1-207ENST00000471342 DNAJC30Q96LL9 226 aa6.77□□□□□ -1.33
SF3A1-207ENST00000471342 HIST1H2BNQ99877 126 aa6.77□□□□□ -1.33
SF3A1-207ENST00000471342 HIST1H2BMQ99879 126 aa6.77□□□□□ -1.33
SF3A1-207ENST00000471342 C20orf78Q9BR46 151 aa6.77□□□□□ -1.33
SF3A1-207ENST00000471342 FAT2Q9NYQ8 4349 aa6.77□□□□□ -1.33
SF3A1-207ENST00000471342 DNAH11Q96DT5 4516 aa6.77□□□□□ -1.33
SF3A1-207ENST00000471342 IGHV3-38A0A0C4DH36 116 aa6.76□□□□□ -1.33
SF3A1-207ENST00000471342 SDHAF1A6NFY7 115 aa6.76□□□□□ -1.33
SF3A1-207ENST00000471342 SRIP30626 198 aa6.76□□□□□ -1.33
SF3A1-207ENST00000471342 CKS2P33552 79 aa6.76□□□□□ -1.33
SF3A1-207ENST00000471342 SUMO2P61956 95 aaKnown RBP6.76□□□□□ -1.33
SF3A1-207ENST00000471342 Q0VG73 95 aa6.76□□□□□ -1.33
SF3A1-207ENST00000471342 Q8N3U1 123 aa6.76□□□□□ -1.33
SF3A1-207ENST00000471342 LINC00588Q9Y4M8 146 aa6.76□□□□□ -1.33
SF3A1-207ENST00000471342 FRAS1Q86XX4 4008 aa6.75□□□□□ -1.33
SF3A1-207ENST00000471342 IGLL5B9A064 214 aa6.75□□□□□ -1.33
SF3A1-207ENST00000471342 SMIM17P0DL12 118 aa6.75□□□□□ -1.33
SF3A1-207ENST00000471342 IFI27P40305 119 aaPredicted RBP6.75□□□□□ -1.33
SF3A1-207ENST00000471342 COA6Q5JTJ3 125 aaKnown RBP6.75□□□□□ -1.33
SF3A1-207ENST00000471342 SMIM2Q9BVW6 85 aa6.75□□□□□ -1.33
SF3A1-207ENST00000471342 LAMTOR2Q9Y2Q5 125 aa6.75□□□□□ -1.33
SF3A1-207ENST00000471342 OR10J3Q5JRS4 329 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms