RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 LOC389332A0A1B0GUA5 103 aa6.46□□□□□ -1.38
VPS50-207ENST00000458530 IFITM10A6NMD0 228 aa6.46□□□□□ -1.38
VPS50-207ENST00000458530 SMKR1H3BMG3 65 aa6.46□□□□□ -1.38
VPS50-207ENST00000458530 G0S2P27469 103 aa6.46□□□□□ -1.38
VPS50-207ENST00000458530 LINC00310P59036 64 aa6.46□□□□□ -1.38
VPS50-207ENST00000458530 SUMO2P61956 95 aaKnown RBP6.46□□□□□ -1.38
VPS50-207ENST00000458530 RPL32P62910 135 aaKnown RBP6.46□□□□□ -1.38
VPS50-207ENST00000458530 ZFP2Q6ZN57 461 aa6.46□□□□□ -1.38
VPS50-207ENST00000458530 Q8N8P6 123 aa6.46□□□□□ -1.38
VPS50-207ENST00000458530 NRACQ8N912 160 aa6.46□□□□□ -1.38
VPS50-207ENST00000458530 CSNK1G2-AS1Q8NCQ2 148 aa6.46□□□□□ -1.38
VPS50-207ENST00000458530 IL17DQ8TAD2 202 aa6.46□□□□□ -1.38
VPS50-207ENST00000458530 RASL10AQ92737 203 aa6.46□□□□□ -1.38
VPS50-207ENST00000458530 EDA2RQ9HAV5 297 aa6.46□□□□□ -1.38
VPS50-207ENST00000458530 ST20Q9HBF5 79 aa6.46□□□□□ -1.38
VPS50-207ENST00000458530 HSPB8Q9UJY1 196 aa6.46□□□□□ -1.38
VPS50-207ENST00000458530 KIF25-AS1Q9Y6Z4 181 aa6.46□□□□□ -1.38
VPS50-207ENST00000458530 DNAH7Q8WXX0 4024 aa6.46□□□□□ -1.38
VPS50-207ENST00000458530 SACSQ9NZJ4 4579 aa6.46□□□□□ -1.38
VPS50-207ENST00000458530 A0A087WWL8 130 aa6.45□□□□□ -1.38
VPS50-207ENST00000458530 TRGV1A0A0A0MS02 117 aa6.45□□□□□ -1.38
VPS50-207ENST00000458530 TRAV26-2A0A0B4J265 109 aa6.45□□□□□ -1.38
VPS50-207ENST00000458530 LINC01549A6NIU2 74 aa6.45□□□□□ -1.38
VPS50-207ENST00000458530 A8MZ25 164 aa6.45□□□□□ -1.38
VPS50-207ENST00000458530 RS1O15537 224 aa6.45□□□□□ -1.38
VPS50-207ENST00000458530 SPRY2O43597 315 aa6.45□□□□□ -1.38
VPS50-207ENST00000458530 IGHV4-30-4P0DP06 118 aa6.45□□□□□ -1.38
VPS50-207ENST00000458530 AZU1P20160 251 aa6.45□□□□□ -1.38
VPS50-207ENST00000458530 IFI27P40305 119 aaPredicted RBP6.45□□□□□ -1.38
VPS50-207ENST00000458530 KRTAP10-11P60412 298 aa6.45□□□□□ -1.38
VPS50-207ENST00000458530 SUMO4Q6EEV6 95 aa6.45□□□□□ -1.38
VPS50-207ENST00000458530 LYSTQ99698 3801 aa6.45□□□□□ -1.38
VPS50-207ENST00000458530 SMIM2Q9BVW6 85 aa6.45□□□□□ -1.38
VPS50-207ENST00000458530 MRPL16Q9NX20 251 aaKnown RBP6.45□□□□□ -1.38
VPS50-207ENST00000458530 TRAV4A0A0B4J268 109 aa6.44□□□□□ -1.38
VPS50-207ENST00000458530 IGHV1-24A0A0C4DH33 117 aa6.44□□□□□ -1.38
VPS50-207ENST00000458530 TRBV6-5A0A0K0K1A5 114 aa6.44□□□□□ -1.38
VPS50-207ENST00000458530 LINC01546A6NGU7 62 aa6.44□□□□□ -1.38
VPS50-207ENST00000458530 C3orf84H3BNL1 204 aa6.44□□□□□ -1.38
VPS50-207ENST00000458530 NUPR1O60356 82 aa6.44□□□□□ -1.38
VPS50-207ENST00000458530 LEPROTL1O95214 131 aa6.44□□□□□ -1.38
VPS50-207ENST00000458530 HBDP02042 147 aa6.44□□□□□ -1.38
VPS50-207ENST00000458530 CRYGDP07320 174 aa6.44□□□□□ -1.38
VPS50-207ENST00000458530 LINC00315P59091 139 aa6.44□□□□□ -1.38
VPS50-207ENST00000458530 ORMDL2Q53FV1 153 aa6.44□□□□□ -1.38
VPS50-207ENST00000458530 Q6ZWC4 215 aa6.44□□□□□ -1.38
VPS50-207ENST00000458530 OR4C5Q8NGB2 326 aa6.44□□□□□ -1.38
VPS50-207ENST00000458530 OVOL2Q9BRP0 275 aa6.44□□□□□ -1.38
VPS50-207ENST00000458530 TEX48A0A1B0GUV7 120 aa6.43□□□□□ -1.38
VPS50-207ENST00000458530 C20orf202A1L168 122 aa6.43□□□□□ -1.38
VPS50-207ENST00000458530 MIFP14174 115 aa6.43□□□□□ -1.38
VPS50-207ENST00000458530 LAGE3Q14657 143 aa6.43□□□□□ -1.38
VPS50-207ENST00000458530 CFAP126Q5VTH2 177 aa6.43□□□□□ -1.38
VPS50-207ENST00000458530 FAM19A2Q8N3H0 131 aa6.43□□□□□ -1.38
VPS50-207ENST00000458530 URB1-AS1Q96HZ7 61 aa6.43□□□□□ -1.38
VPS50-207ENST00000458530 DNAJC30Q96LL9 226 aa6.43□□□□□ -1.38
VPS50-207ENST00000458530 KIR2DL4Q99706 377 aa6.43□□□□□ -1.38
VPS50-207ENST00000458530 JPT2Q9H910 190 aa6.43□□□□□ -1.38
VPS50-207ENST00000458530 NOP10Q9NPE3 64 aaKnown RBP6.43□□□□□ -1.38
VPS50-207ENST00000458530 NIT2Q9NQR4 276 aa6.43□□□□□ -1.38
VPS50-207ENST00000458530 TRGV2A0A075B6R0 118 aa6.42□□□□□ -1.38
VPS50-207ENST00000458530 LYRM9A8MSI8 78 aa6.42□□□□□ -1.38
VPS50-207ENST00000458530 M0QY20 66 aa6.42□□□□□ -1.38
VPS50-207ENST00000458530 VCYO14598 125 aa6.42□□□□□ -1.38
VPS50-207ENST00000458530 IGHV3-53P01767 116 aa6.42□□□□□ -1.38
VPS50-207ENST00000458530 GATA1P15976 413 aaPredicted RBP6.42□□□□□ -1.38
VPS50-207ENST00000458530 BTF3P20290 206 aaKnown RBP6.42□□□□□ -1.38
VPS50-207ENST00000458530 FCER1GP30273 86 aa6.42□□□□□ -1.38
VPS50-207ENST00000458530 KRTDAPP60985 99 aa6.42□□□□□ -1.38
VPS50-207ENST00000458530 JOSD1Q15040 202 aaPredicted RBP6.42□□□□□ -1.38
VPS50-207ENST00000458530 DEFB135Q30KP9 77 aa6.42□□□□□ -1.38
VPS50-207ENST00000458530 LINC00518Q8N0U6 118 aa6.42□□□□□ -1.38
VPS50-207ENST00000458530 RPL39LQ96EH5 51 aaKnown RBP6.42□□□□□ -1.38
VPS50-207ENST00000458530 C12orf57Q99622 126 aa6.42□□□□□ -1.38
VPS50-207ENST00000458530 MAP1LC3CQ9BXW4 147 aa6.42□□□□□ -1.38
VPS50-207ENST00000458530 TP53TG1Q9Y2A0 90 aa6.42□□□□□ -1.38
VPS50-207ENST00000458530 TNFRSF18Q9Y5U5 241 aa6.42□□□□□ -1.38
VPS50-207ENST00000458530 TRBV10-1A0A0K0K1A3 114 aa6.41□□□□□ -1.38
VPS50-207ENST00000458530 SCGB1D1O95968 90 aa6.41□□□□□ -1.38
VPS50-207ENST00000458530 NUDT3O95989 172 aa6.41□□□□□ -1.38
VPS50-207ENST00000458530 PRM2P04554 102 aa6.41□□□□□ -1.38
VPS50-207ENST00000458530 NHLRC4P0CG21 123 aaPredicted RBP6.41□□□□□ -1.38
VPS50-207ENST00000458530 S100A12P80511 92 aa6.41□□□□□ -1.38
VPS50-207ENST00000458530 UFSP1Q6NVU6 142 aa6.41□□□□□ -1.38
VPS50-207ENST00000458530 Q6ZTI0 123 aa6.41□□□□□ -1.38
VPS50-207ENST00000458530 OR11H2Q8NH07 326 aa6.41□□□□□ -1.38
VPS50-207ENST00000458530 RNF183Q96D59 192 aa6.41□□□□□ -1.38
VPS50-207ENST00000458530 TMEM70Q9BUB7 260 aa6.41□□□□□ -1.38
VPS50-207ENST00000458530 IGLV2-18A0A075B6J9 118 aa6.4□□□□□ -1.38
VPS50-207ENST00000458530 TRBV27A0A0K0K1C4 114 aa6.4□□□□□ -1.38
VPS50-207ENST00000458530 PLAC8L1A1L4L8 177 aa6.4□□□□□ -1.38
VPS50-207ENST00000458530 SDHAF1A6NFY7 115 aa6.4□□□□□ -1.38
VPS50-207ENST00000458530 ATP5LO75964 103 aa6.4□□□□□ -1.38
VPS50-207ENST00000458530 GAS8-AS1O95177 125 aa6.4□□□□□ -1.38
VPS50-207ENST00000458530 RHOHQ15669 191 aa6.4□□□□□ -1.38
VPS50-207ENST00000458530 PMCHL1Q16048 86 aa6.4□□□□□ -1.38
VPS50-207ENST00000458530 PYY3Q5JQD4 70 aa6.4□□□□□ -1.38
VPS50-207ENST00000458530 CASC10Q5T4H9 136 aa6.4□□□□□ -1.38
VPS50-207ENST00000458530 C18orf15Q96N68 181 aa6.4□□□□□ -1.38
VPS50-207ENST00000458530 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms