RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 SDHCQ99643 169 aaPredicted RBP9.2□□□□□ -0.94
SF3B4-202ENST00000457312 TMEM243Q9BU79 118 aa9.2□□□□□ -0.94
SF3B4-202ENST00000457312 GSKIPQ9P0R6 139 aa9.2□□□□□ -0.94
SF3B4-202ENST00000457312 RAB26Q9ULW5 256 aa9.2□□□□□ -0.94
SF3B4-202ENST00000457312 C9orf170A2RU37 121 aa9.19□□□□□ -0.94
SF3B4-202ENST00000457312 S100A11P31949 105 aa9.19□□□□□ -0.94
SF3B4-202ENST00000457312 KHDC3LQ587J8 217 aa9.19□□□□□ -0.94
SF3B4-202ENST00000457312 ZFP82Q8N141 532 aa9.19□□□□□ -0.94
SF3B4-202ENST00000457312 LINC00337Q8N6G1 96 aa9.19□□□□□ -0.94
SF3B4-202ENST00000457312 C11orf1Q9H5F2 150 aa9.19□□□□□ -0.94
SF3B4-202ENST00000457312 MBD2Q9UBB5 411 aa9.19□□□□□ -0.94
SF3B4-202ENST00000457312 IGHV1-58A0A0C4DH39 117 aa9.18□□□□□ -0.94
SF3B4-202ENST00000457312 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.18□□□□□ -0.94
SF3B4-202ENST00000457312 SULT1A1P50225 295 aa9.18□□□□□ -0.94
SF3B4-202ENST00000457312 MEF2BQ02080 365 aaPredicted RBP9.18□□□□□ -0.94
SF3B4-202ENST00000457312 IL18Q14116 193 aa9.18□□□□□ -0.94
SF3B4-202ENST00000457312 EIF5AL1Q6IS14 154 aaKnown RBP9.18□□□□□ -0.94
SF3B4-202ENST00000457312 LINC00304Q8N9R0 145 aa9.18□□□□□ -0.94
SF3B4-202ENST00000457312 THAP6Q8TBB0 222 aa9.18□□□□□ -0.94
SF3B4-202ENST00000457312 TSKUQ8WUA8 353 aa9.18□□□□□ -0.94
SF3B4-202ENST00000457312 SERTM2A0A1B0GWG4 89 aa9.17□□□□□ -0.94
SF3B4-202ENST00000457312 IGSF23A1L1A6 192 aa9.17□□□□□ -0.94
SF3B4-202ENST00000457312 GRIFINA4D1Z8 144 aa9.17□□□□□ -0.94
SF3B4-202ENST00000457312 TPT1P13693 172 aaKnown RBP9.17□□□□□ -0.94
SF3B4-202ENST00000457312 CAMPP49913 170 aa9.17□□□□□ -0.94
SF3B4-202ENST00000457312 RPL18AQ02543 176 aaKnown RBP9.17□□□□□ -0.94
SF3B4-202ENST00000457312 APOMO95445 188 aa9.16□□□□□ -0.94
SF3B4-202ENST00000457312 TSHBP01222 138 aa9.16□□□□□ -0.94
SF3B4-202ENST00000457312 FLI1Q01543 452 aaPredicted RBP9.16□□□□□ -0.94
SF3B4-202ENST00000457312 PRNTQ86SH4 94 aa9.16□□□□□ -0.94
SF3B4-202ENST00000457312 LSM5Q9Y4Y9 91 aaKnown RBP9.16□□□□□ -0.94
SF3B4-202ENST00000457312 FAM168BA1KXE4 195 aa9.15□□□□□ -0.94
SF3B4-202ENST00000457312 KRBOX1C9JBD0 128 aa9.15□□□□□ -0.94
SF3B4-202ENST00000457312 TCRAP04437 139 aa9.15□□□□□ -0.94
SF3B4-202ENST00000457312 HBG1P69891 147 aa9.15□□□□□ -0.94
SF3B4-202ENST00000457312 HBG2P69892 147 aa9.15□□□□□ -0.94
SF3B4-202ENST00000457312 KRTAP13-2Q52LG2 175 aa9.15□□□□□ -0.94
SF3B4-202ENST00000457312 SLC25A21Q9BQT8 299 aaPredicted RBP9.15□□□□□ -0.94
SF3B4-202ENST00000457312 ZNF561-AS1K7EIQ3 104 aa9.14□□□□□ -0.95
SF3B4-202ENST00000457312 M0R036 132 aa9.14□□□□□ -0.95
SF3B4-202ENST00000457312 M0R2T5 61 aa9.14□□□□□ -0.95
SF3B4-202ENST00000457312 RGS5O15539 181 aa9.14□□□□□ -0.95
SF3B4-202ENST00000457312 ZNF861PO60384 105 aa9.14□□□□□ -0.95
SF3B4-202ENST00000457312 NUP35Q8NFH5 326 aa9.14□□□□□ -0.95
SF3B4-202ENST00000457312 VCX3BQ9H321 246 aa9.14□□□□□ -0.95
SF3B4-202ENST00000457312 FABP5P3A8MUU1 101 aa9.13□□□□□ -0.95
SF3B4-202ENST00000457312 FAUP35544 74 aaKnown RBP9.13□□□□□ -0.95
SF3B4-202ENST00000457312 KRTAP19-1Q8IUB9 90 aa9.13□□□□□ -0.95
SF3B4-202ENST00000457312 ISOC2Q96AB3 205 aa9.13□□□□□ -0.95
SF3B4-202ENST00000457312 CTDSP2O14595 271 aa9.12□□□□□ -0.95
SF3B4-202ENST00000457312 TMBIM6P55061 237 aa9.12□□□□□ -0.95
SF3B4-202ENST00000457312 TAS2R45P59539 299 aa9.12□□□□□ -0.95
SF3B4-202ENST00000457312 ATP6V1FQ16864 119 aa9.12□□□□□ -0.95
SF3B4-202ENST00000457312 STX12Q86Y82 276 aa9.12□□□□□ -0.95
SF3B4-202ENST00000457312 TMEM252Q8N6L7 170 aa9.12□□□□□ -0.95
SF3B4-202ENST00000457312 FUNDC2Q9BWH2 189 aa9.12□□□□□ -0.95
SF3B4-202ENST00000457312 MED28Q9H204 178 aa9.12□□□□□ -0.95
SF3B4-202ENST00000457312 KCNIP2Q9NS61 270 aa9.12□□□□□ -0.95
SF3B4-202ENST00000457312 NEBP20929 6669 aa9.11□□□□□ -0.95
SF3B4-202ENST00000457312 UBE2L6O14933 153 aa9.11□□□□□ -0.95
SF3B4-202ENST00000457312 XCL1P47992 114 aa9.11□□□□□ -0.95
SF3B4-202ENST00000457312 FAM19A5Q7Z5A7 132 aaPredicted RBP9.11□□□□□ -0.95
SF3B4-202ENST00000457312 C5orf17Q8NAS9 161 aa9.11□□□□□ -0.95
SF3B4-202ENST00000457312 RSL24D1Q9UHA3 163 aaKnown RBP9.11□□□□□ -0.95
SF3B4-202ENST00000457312 IGLV4-69A0A075B6H9 119 aa9.1□□□□□ -0.95
SF3B4-202ENST00000457312 F5H697 171 aa9.1□□□□□ -0.95
SF3B4-202ENST00000457312 K7EQM0 130 aa9.1□□□□□ -0.95
SF3B4-202ENST00000457312 SAPCD1Q5SSQ6 148 aa9.1□□□□□ -0.95
SF3B4-202ENST00000457312 FLVCR2Q9UPI3 526 aa9.1□□□□□ -0.95
SF3B4-202ENST00000457312 UBE2BP63146 152 aa9.09□□□□□ -0.95
SF3B4-202ENST00000457312 RNF151Q2KHN1 245 aa9.09□□□□□ -0.95
SF3B4-202ENST00000457312 FP248Q71RG6 208 aaPredicted RBP9.09□□□□□ -0.95
SF3B4-202ENST00000457312 MRPS26Q9BYN8 205 aaKnown RBP9.09□□□□□ -0.95
SF3B4-202ENST00000457312 KRTAP4-16G5E9R7 235 aaPredicted RBP9.08□□□□□ -0.96
SF3B4-202ENST00000457312 KRTAP7-1Q8IUC3 87 aa9.08□□□□□ -0.96
SF3B4-202ENST00000457312 ANAPC11Q9NYG5 84 aa9.08□□□□□ -0.96
SF3B4-202ENST00000457312 CRIP1P50238 77 aa9.07□□□□□ -0.96
SF3B4-202ENST00000457312 CTAG1AP78358 180 aa9.07□□□□□ -0.96
SF3B4-202ENST00000457312 OR10AG1Q8NH19 301 aa9.07□□□□□ -0.96
SF3B4-202ENST00000457312 ARL2-SNX15V9GYD0 113 aa9.07□□□□□ -0.96
SF3B4-202ENST00000457312 TMSB15BA0A087X1C1 80 aa9.06□□□□□ -0.96
SF3B4-202ENST00000457312 CCL25O15444 150 aa9.06□□□□□ -0.96
SF3B4-202ENST00000457312 RPL12P30050 165 aaKnown RBP9.06□□□□□ -0.96
SF3B4-202ENST00000457312 PQLC2Q6ZP29 291 aa9.06□□□□□ -0.96
SF3B4-202ENST00000457312 OR5A1Q8NGJ0 315 aa9.06□□□□□ -0.96
SF3B4-202ENST00000457312 PGLYRP4Q96LB8 373 aa9.06□□□□□ -0.96
SF3B4-202ENST00000457312 CAMK2N2Q96S95 79 aa9.06□□□□□ -0.96
SF3B4-202ENST00000457312 OPRPNQ99935 248 aaPredicted RBP9.06□□□□□ -0.96
SF3B4-202ENST00000457312 ZNF471Q9BX82 626 aaPredicted RBP9.06□□□□□ -0.96
SF3B4-202ENST00000457312 WDR61Q9GZS3 305 aaKnown RBP9.06□□□□□ -0.96
SF3B4-202ENST00000457312 M0QXV9 152 aa9.05□□□□□ -0.96
SF3B4-202ENST00000457312 SH2D1AO60880 128 aa9.05□□□□□ -0.96
SF3B4-202ENST00000457312 PVALBP20472 110 aaPredicted RBP9.04□□□□□ -0.96
SF3B4-202ENST00000457312 LINC01559Q495D7 138 aa9.04□□□□□ -0.96
SF3B4-202ENST00000457312 TRAV34A0A0B4J273 112 aa9.03□□□□□ -0.96
SF3B4-202ENST00000457312 M0QY20 66 aa9.03□□□□□ -0.96
SF3B4-202ENST00000457312 TOMM5Q8N4H5 51 aa9.03□□□□□ -0.96
SF3B4-202ENST00000457312 C19orf71A6NCJ1 209 aa9.02□□□□□ -0.97
SF3B4-202ENST00000457312 C17orf112F2Z3M2 114 aa9.02□□□□□ -0.97
SF3B4-202ENST00000457312 NKX2-5P52952 324 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms