RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 RPL39LQ96EH5 51 aaKnown RBP12.95□□□□□ -0.34
HMGN1-206ENST00000431390 C11orf68Q9H3H3 251 aaKnown RBP12.95□□□□□ -0.34
HMGN1-206ENST00000431390 DEFB130BP0DP73 79 aa12.94□□□□□ -0.34
HMGN1-206ENST00000431390 DEFB130AP0DP74 79 aa12.94□□□□□ -0.34
HMGN1-206ENST00000431390 NIT1Q86X76 327 aa12.94□□□□□ -0.34
HMGN1-206ENST00000431390 PRSS3P2Q8NHM4 247 aa12.94□□□□□ -0.34
HMGN1-206ENST00000431390 CHCHD1Q96BP2 118 aaKnown RBP12.94□□□□□ -0.34
HMGN1-206ENST00000431390 TRBV6-5A0A0K0K1A5 114 aa12.94□□□□□ -0.34
HMGN1-206ENST00000431390 LINC00614P0C842 121 aa12.94□□□□□ -0.34
HMGN1-206ENST00000431390 SPART-AS1P0CW21 52 aa12.94□□□□□ -0.34
HMGN1-206ENST00000431390 SUMO2P61956 95 aaKnown RBP12.94□□□□□ -0.34
HMGN1-206ENST00000431390 URB1-AS1Q96HZ7 61 aa12.94□□□□□ -0.34
HMGN1-206ENST00000431390 NXT2Q9NPJ8 142 aaKnown RBP12.94□□□□□ -0.34
HMGN1-206ENST00000431390 NIT2Q9NQR4 276 aa12.94□□□□□ -0.34
HMGN1-206ENST00000431390 LOC389332A0A1B0GUA5 103 aa12.93□□□□□ -0.34
HMGN1-206ENST00000431390 IFI27P40305 119 aaPredicted RBP12.93□□□□□ -0.34
HMGN1-206ENST00000431390 RPL32P62910 135 aaKnown RBP12.93□□□□□ -0.34
HMGN1-206ENST00000431390 HIST3H2BBQ8N257 126 aa12.93□□□□□ -0.34
HMGN1-206ENST00000431390 ST20Q9HBF5 79 aa12.93□□□□□ -0.34
HMGN1-206ENST00000431390 NUPR1O60356 82 aa12.92□□□□□ -0.34
HMGN1-206ENST00000431390 RNASEKQ6P5S7 137 aaKnown RBP12.92□□□□□ -0.34
HMGN1-206ENST00000431390 Q6ZSN1 163 aa12.92□□□□□ -0.34
HMGN1-206ENST00000431390 FA2HQ7L5A8 372 aa12.92□□□□□ -0.34
HMGN1-206ENST00000431390 Q8N8P6 123 aa12.92□□□□□ -0.34
HMGN1-206ENST00000431390 PMCHP20382 165 aa12.91□□□□□ -0.34
HMGN1-206ENST00000431390 DAD1P61803 113 aa12.91□□□□□ -0.34
HMGN1-206ENST00000431390 SMIM2Q9BVW6 85 aa12.91□□□□□ -0.34
HMGN1-206ENST00000431390 CELA1Q9UNI1 258 aa12.91□□□□□ -0.34
HMGN1-206ENST00000431390 IGLV2-18A0A075B6J9 118 aa12.9□□□□□ -0.34
HMGN1-206ENST00000431390 NHLRC4P0CG21 123 aaPredicted RBP12.9□□□□□ -0.34
HMGN1-206ENST00000431390 DNAJC30Q96LL9 226 aa12.9□□□□□ -0.34
HMGN1-206ENST00000431390 AP5S1Q9NUS5 200 aa12.9□□□□□ -0.34
HMGN1-206ENST00000431390 TRGV4A0A0C4DH28 118 aa12.9□□□□□ -0.35
HMGN1-206ENST00000431390 TRBV10-1A0A0K0K1A3 114 aa12.9□□□□□ -0.35
HMGN1-206ENST00000431390 LINC01546A6NGU7 62 aa12.9□□□□□ -0.35
HMGN1-206ENST00000431390 K7EQD1 137 aa12.9□□□□□ -0.35
HMGN1-206ENST00000431390 HSBP1O75506 76 aa12.9□□□□□ -0.35
HMGN1-206ENST00000431390 FHL2Q14192 279 aa12.9□□□□□ -0.35
HMGN1-206ENST00000431390 RYR2Q92736 4967 aa12.89□□□□□ -0.35
HMGN1-206ENST00000431390 TRBV6-4A0A1B0GX49 114 aa12.89□□□□□ -0.35
HMGN1-206ENST00000431390 S100A2P29034 98 aa12.89□□□□□ -0.35
HMGN1-206ENST00000431390 POLR2KP53803 58 aaKnown RBP12.89□□□□□ -0.35
HMGN1-206ENST00000431390 PDZD11Q5EBL8 140 aa12.89□□□□□ -0.35
HMGN1-206ENST00000431390 TMEM70Q9BUB7 260 aa12.89□□□□□ -0.35
HMGN1-206ENST00000431390 ZMAT4Q9H898 229 aa12.89□□□□□ -0.35
HMGN1-206ENST00000431390 SDHAF1A6NFY7 115 aa12.88□□□□□ -0.35
HMGN1-206ENST00000431390 K7EMI3 77 aa12.88□□□□□ -0.35
HMGN1-206ENST00000431390 SLC25A29Q8N8R3 303 aa12.88□□□□□ -0.35
HMGN1-206ENST00000431390 TRBV27A0A0K0K1C4 114 aa12.87□□□□□ -0.35
HMGN1-206ENST00000431390 LOC105371267A0A1B0GV96 52 aa12.87□□□□□ -0.35
HMGN1-206ENST00000431390 C3orf84H3BNL1 204 aa12.87□□□□□ -0.35
HMGN1-206ENST00000431390 P0DMU3 169 aa12.87□□□□□ -0.35
HMGN1-206ENST00000431390 FAM231AP0DMU4 169 aa12.87□□□□□ -0.35
HMGN1-206ENST00000431390 FAM231CP0DMU5 169 aa12.87□□□□□ -0.35
HMGN1-206ENST00000431390 NEXN-AS1Q8NBZ9 246 aa12.87□□□□□ -0.35
HMGN1-206ENST00000431390 TMEM18Q96B42 140 aa12.87□□□□□ -0.35
HMGN1-206ENST00000431390 PACRGQ96M98 296 aaPredicted RBP12.87□□□□□ -0.35
HMGN1-206ENST00000431390 TNFRSF18Q9Y5U5 241 aa12.87□□□□□ -0.35
HMGN1-206ENST00000431390 IFITM10A6NMD0 228 aa12.86□□□□□ -0.35
HMGN1-206ENST00000431390 VCYO14598 125 aa12.86□□□□□ -0.35
HMGN1-206ENST00000431390 DYNC2H1Q8NCM8 4307 aaKnown RBP12.86□□□□□ -0.35
HMGN1-206ENST00000431390 A0A0J9YWU9 116 aa12.86□□□□□ -0.35
HMGN1-206ENST00000431390 ATP5G1P05496 136 aa12.86□□□□□ -0.35
HMGN1-206ENST00000431390 RHOHQ15669 191 aa12.86□□□□□ -0.35
HMGN1-206ENST00000431390 HIST1H2BLQ99880 126 aa12.86□□□□□ -0.35
HMGN1-206ENST00000431390 AMTP48728 403 aa12.85□□□□□ -0.35
HMGN1-206ENST00000431390 RPL36AP83881 106 aaKnown RBP12.85□□□□□ -0.35
HMGN1-206ENST00000431390 RPL36ALQ969Q0 106 aaKnown RBP12.85□□□□□ -0.35
HMGN1-206ENST00000431390 PRADC1Q9BSG0 188 aa12.85□□□□□ -0.35
HMGN1-206ENST00000431390 TRBV7-3A0A075B6L6 115 aa12.84□□□□□ -0.35
HMGN1-206ENST00000431390 IGHV1-24A0A0C4DH33 117 aa12.84□□□□□ -0.35
HMGN1-206ENST00000431390 C12orf74Q32Q52 190 aa12.84□□□□□ -0.35
HMGN1-206ENST00000431390 FAM19A2Q8N3H0 131 aa12.84□□□□□ -0.35
HMGN1-206ENST00000431390 KIR2DL4Q99706 377 aa12.84□□□□□ -0.35
HMGN1-206ENST00000431390 Q9UF83 564 aa12.84□□□□□ -0.35
HMGN1-206ENST00000431390 PRO0255Q9UI72 69 aa12.84□□□□□ -0.35
HMGN1-206ENST00000431390 HHLA3Q9XRX5 114 aa12.84□□□□□ -0.35
HMGN1-206ENST00000431390 I3L3M4 83 aa12.83□□□□□ -0.36
HMGN1-206ENST00000431390 FABP4P15090 132 aa12.83□□□□□ -0.36
HMGN1-206ENST00000431390 LAGE3Q14657 143 aa12.83□□□□□ -0.36
HMGN1-206ENST00000431390 EPPK1P58107 5090 aaKnown RBP12.83□□□□□ -0.36
HMGN1-206ENST00000431390 TCAPO15273 167 aa12.82□□□□□ -0.36
HMGN1-206ENST00000431390 CRYBA4P53673 196 aa12.82□□□□□ -0.36
HMGN1-206ENST00000431390 ORMDL2Q53FV1 153 aa12.82□□□□□ -0.36
HMGN1-206ENST00000431390 HUWE1Q7Z6Z7 4374 aaKnown RBP12.82□□□□□ -0.36
HMGN1-206ENST00000431390 CASC10Q5T4H9 136 aa12.81□□□□□ -0.36
HMGN1-206ENST00000431390 NEGR1Q7Z3B1 354 aa12.81□□□□□ -0.36
HMGN1-206ENST00000431390 ZNRF2Q8NHG8 242 aa12.81□□□□□ -0.36
HMGN1-206ENST00000431390 TENM2Q9NT68 2774 aa12.81□□□□□ -0.36
HMGN1-206ENST00000431390 HBDP02042 147 aa12.81□□□□□ -0.36
HMGN1-206ENST00000431390 FCER1GP30273 86 aa12.81□□□□□ -0.36
HMGN1-206ENST00000431390 PMCHL1Q16048 86 aa12.81□□□□□ -0.36
HMGN1-206ENST00000431390 MUC7Q8TAX7 377 aa12.81□□□□□ -0.36
HMGN1-206ENST00000431390 SACSQ9NZJ4 4579 aa12.8□□□□□ -0.36
HMGN1-206ENST00000431390 A0A096LNJ9 63 aa12.8□□□□□ -0.36
HMGN1-206ENST00000431390 UBE2D3P61077 147 aa12.8□□□□□ -0.36
HMGN1-206ENST00000431390 UBE2D2P62837 147 aa12.8□□□□□ -0.36
HMGN1-206ENST00000431390 STAB2Q8WWQ8 2551 aa12.8□□□□□ -0.36
HMGN1-206ENST00000431390 BIRC6Q9NR09 4857 aa12.79□□□□□ -0.36
HMGN1-206ENST00000431390 GAGE12JA6NER3 117 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms