RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 FAM231AP0DMU4 169 aa9.25□□□□□ -0.93
CNN3-203ENST00000415017 FAM231CP0DMU5 169 aa9.25□□□□□ -0.93
CNN3-203ENST00000415017 RPS10P46783 165 aaKnown RBP9.25□□□□□ -0.93
CNN3-203ENST00000415017 CEMP1Q6PRD7 247 aaPredicted RBP9.25□□□□□ -0.93
CNN3-203ENST00000415017 NEXN-AS1Q8NBZ9 246 aa9.25□□□□□ -0.93
CNN3-203ENST00000415017 D6R8Y8 96 aa9.24□□□□□ -0.93
CNN3-203ENST00000415017 PAX4O43316 350 aa9.24□□□□□ -0.93
CNN3-203ENST00000415017 HTN3P15516 51 aa9.24□□□□□ -0.93
CNN3-203ENST00000415017 POLR2KP53803 58 aaKnown RBP9.24□□□□□ -0.93
CNN3-203ENST00000415017 RPL32P62910 135 aaKnown RBP9.24□□□□□ -0.93
CNN3-203ENST00000415017 ORMDL3Q8N138 153 aa9.24□□□□□ -0.93
CNN3-203ENST00000415017 PRADC1Q9BSG0 188 aa9.24□□□□□ -0.93
CNN3-203ENST00000415017 ALKBH7Q9BT30 221 aaPredicted RBP9.24□□□□□ -0.93
CNN3-203ENST00000415017 LAMTOR2Q9Y2Q5 125 aa9.24□□□□□ -0.93
CNN3-203ENST00000415017 TRAPPC1Q9Y5R8 145 aa9.24□□□□□ -0.93
CNN3-203ENST00000415017 TRBV7-3A0A075B6L6 115 aa9.23□□□□□ -0.93
CNN3-203ENST00000415017 A0A096LPF7 62 aa9.23□□□□□ -0.93
CNN3-203ENST00000415017 LOC100131303A0A0U1RQF7 123 aa9.23□□□□□ -0.93
CNN3-203ENST00000415017 SMKR1H3BMG3 65 aa9.23□□□□□ -0.93
CNN3-203ENST00000415017 PPP1R17O96001 155 aa9.23□□□□□ -0.93
CNN3-203ENST00000415017 CKS2P33552 79 aa9.23□□□□□ -0.93
CNN3-203ENST00000415017 UBE2D3P61077 147 aa9.23□□□□□ -0.93
CNN3-203ENST00000415017 UBE2D2P62837 147 aa9.23□□□□□ -0.93
CNN3-203ENST00000415017 FABP9Q0Z7S8 132 aa9.23□□□□□ -0.93
CNN3-203ENST00000415017 MUC7Q8TAX7 377 aa9.23□□□□□ -0.93
CNN3-203ENST00000415017 RPL39LQ96EH5 51 aaKnown RBP9.23□□□□□ -0.93
CNN3-203ENST00000415017 NUPR2A6NF83 97 aa9.22□□□□□ -0.93
CNN3-203ENST00000415017 TNFRSF6BO95407 300 aa9.22□□□□□ -0.93
CNN3-203ENST00000415017 NCR2O95944 276 aa9.22□□□□□ -0.93
CNN3-203ENST00000415017 NPYP01303 97 aa9.22□□□□□ -0.93
CNN3-203ENST00000415017 C15orf53Q8NAA6 179 aa9.22□□□□□ -0.93
CNN3-203ENST00000415017 PRELID3AQ96N28 172 aa9.22□□□□□ -0.93
CNN3-203ENST00000415017 C20orf78Q9BR46 151 aa9.22□□□□□ -0.93
CNN3-203ENST00000415017 VPS13DQ5THJ4 4388 aa9.22□□□□□ -0.93
CNN3-203ENST00000415017 A0A0J9YY99 117 aa9.21□□□□□ -0.94
CNN3-203ENST00000415017 TRBV27A0A0K0K1C4 114 aa9.21□□□□□ -0.94
CNN3-203ENST00000415017 TRGC2P03986 189 aa9.21□□□□□ -0.94
CNN3-203ENST00000415017 GYPEP15421 78 aa9.21□□□□□ -0.94
CNN3-203ENST00000415017 TCTAP57738 103 aa9.21□□□□□ -0.94
CNN3-203ENST00000415017 RPL36AP83881 106 aaKnown RBP9.21□□□□□ -0.94
CNN3-203ENST00000415017 MRPL23Q16540 153 aaKnown RBP9.21□□□□□ -0.94
CNN3-203ENST00000415017 KIAA1644Q3SXP7 199 aa9.21□□□□□ -0.94
CNN3-203ENST00000415017 RPL36ALQ969Q0 106 aaKnown RBP9.21□□□□□ -0.94
CNN3-203ENST00000415017 APLNQ9ULZ1 77 aa9.21□□□□□ -0.94
CNN3-203ENST00000415017 IGLV2-18A0A075B6J9 118 aa9.2□□□□□ -0.94
CNN3-203ENST00000415017 TIRAPP58753 221 aa9.2□□□□□ -0.94
CNN3-203ENST00000415017 SUMO2P61956 95 aaKnown RBP9.2□□□□□ -0.94
CNN3-203ENST00000415017 OR10J3Q5JRS4 329 aa9.2□□□□□ -0.94
CNN3-203ENST00000415017 SH2D6Q7Z4S9 175 aa9.2□□□□□ -0.94
CNN3-203ENST00000415017 ZNRF2Q8NHG8 242 aa9.2□□□□□ -0.94
CNN3-203ENST00000415017 TMEM70Q9BUB7 260 aa9.2□□□□□ -0.94
CNN3-203ENST00000415017 ICOSQ9Y6W8 199 aa9.2□□□□□ -0.94
CNN3-203ENST00000415017 SDHAF1A6NFY7 115 aa9.19□□□□□ -0.94
CNN3-203ENST00000415017 DAZ4Q86SG3 579 aaKnown RBP9.19□□□□□ -0.94
CNN3-203ENST00000415017 ST20Q9HBF5 79 aa9.19□□□□□ -0.94
CNN3-203ENST00000415017 DAZ3Q9NR90 486 aaKnown RBP9.19□□□□□ -0.94
CNN3-203ENST00000415017 DNAH1Q9P2D7 4330 aa9.18□□□□□ -0.94
CNN3-203ENST00000415017 GAGE12JA6NER3 117 aa9.18□□□□□ -0.94
CNN3-203ENST00000415017 LINC01546A6NGU7 62 aa9.18□□□□□ -0.94
CNN3-203ENST00000415017 SRIP30626 198 aa9.18□□□□□ -0.94
CNN3-203ENST00000415017 GAGE1Q13065 139 aa9.18□□□□□ -0.94
CNN3-203ENST00000415017 GAGE4Q13068 117 aa9.18□□□□□ -0.94
CNN3-203ENST00000415017 GAGE5Q13069 117 aa9.18□□□□□ -0.94
CNN3-203ENST00000415017 GAGE13Q4V321 117 aa9.18□□□□□ -0.94
CNN3-203ENST00000415017 KLK5Q9Y337 293 aaPredicted RBP9.18□□□□□ -0.94
CNN3-203ENST00000415017 TNFRSF18Q9Y5U5 241 aa9.18□□□□□ -0.94
CNN3-203ENST00000415017 IGLL5B9A064 214 aa9.17□□□□□ -0.94
CNN3-203ENST00000415017 C3orf84H3BNL1 204 aa9.17□□□□□ -0.94
CNN3-203ENST00000415017 NEGR1Q7Z3B1 354 aa9.17□□□□□ -0.94
CNN3-203ENST00000415017 ATP6V0E2Q8NHE4 81 aa9.17□□□□□ -0.94
CNN3-203ENST00000415017 C18orf32Q8TCD1 76 aa9.17□□□□□ -0.94
CNN3-203ENST00000415017 LYSTQ99698 3801 aa9.17□□□□□ -0.94
CNN3-203ENST00000415017 SMIM2Q9BVW6 85 aa9.17□□□□□ -0.94
CNN3-203ENST00000415017 GTSF1LQ9H1H1 148 aa9.17□□□□□ -0.94
CNN3-203ENST00000415017 VCYO14598 125 aa9.16□□□□□ -0.94
CNN3-203ENST00000415017 Q0VG73 95 aa9.16□□□□□ -0.94
CNN3-203ENST00000415017 LYPD5Q6UWN5 251 aa9.16□□□□□ -0.94
CNN3-203ENST00000415017 NTM-AS1Q6ZSK4 140 aa9.16□□□□□ -0.94
CNN3-203ENST00000415017 I3L3M4 83 aa9.15□□□□□ -0.94
CNN3-203ENST00000415017 TSHBP01222 138 aa9.15□□□□□ -0.94
CNN3-203ENST00000415017 CASC10Q5T4H9 136 aa9.15□□□□□ -0.94
CNN3-203ENST00000415017 Q8N8P6 123 aa9.15□□□□□ -0.94
CNN3-203ENST00000415017 URB1-AS1Q96HZ7 61 aa9.15□□□□□ -0.94
CNN3-203ENST00000415017 MAP1LC3AQ9H492 121 aa9.15□□□□□ -0.94
CNN3-203ENST00000415017 K7EMI3 77 aa9.14□□□□□ -0.95
CNN3-203ENST00000415017 HIST1H2BKO60814 126 aa9.14□□□□□ -0.95
CNN3-203ENST00000415017 NUDT3O95989 172 aa9.14□□□□□ -0.95
CNN3-203ENST00000415017 HIST1H2BJP06899 126 aa9.14□□□□□ -0.95
CNN3-203ENST00000415017 HIST1H2BOP23527 126 aa9.14□□□□□ -0.95
CNN3-203ENST00000415017 HIST1H2BBP33778 126 aa9.14□□□□□ -0.95
CNN3-203ENST00000415017 HIST1H2BDP58876 126 aa9.14□□□□□ -0.95
CNN3-203ENST00000415017 HIST1H2BCP62807 126 aa9.14□□□□□ -0.95
CNN3-203ENST00000415017 HIST2H2BEQ16778 126 aa9.14□□□□□ -0.95
CNN3-203ENST00000415017 ESRGQ1W209 222 aa9.14□□□□□ -0.95
CNN3-203ENST00000415017 TMEM97Q5BJF2 176 aa9.14□□□□□ -0.95
CNN3-203ENST00000415017 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.14□□□□□ -0.95
CNN3-203ENST00000415017 HIST1H2BHQ93079 126 aa9.14□□□□□ -0.95
CNN3-203ENST00000415017 HIST1H2BNQ99877 126 aa9.14□□□□□ -0.95
CNN3-203ENST00000415017 HIST1H2BMQ99879 126 aa9.14□□□□□ -0.95
CNN3-203ENST00000415017 ALMS1Q8TCU4 4167 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms