RNA–Protein interactions for RNA: ENST00000411525.1

LINC00539-201, long intergenic non-protein coding RNA 539, humanhuman

TSL 3

Gene LINC00539, Length 664 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-201ENST00000411525 HIST3H2BBQ8N257 126 aa8.03□□□□□ -1.12
LINC00539-201ENST00000411525 LINC00612Q8N6U2 182 aa8.03□□□□□ -1.12
LINC00539-201ENST00000411525 OR4C5Q8NGB2 326 aa8.03□□□□□ -1.12
LINC00539-201ENST00000411525 RETNQ9HD89 108 aa8.03□□□□□ -1.12
LINC00539-201ENST00000411525 NACAE9PAV3 2078 aa8.02□□□□□ -1.12
LINC00539-201ENST00000411525 TRGV2A0A075B6R0 118 aa8.02□□□□□ -1.13
LINC00539-201ENST00000411525 IGHV3-73A0A0B4J1V6 119 aa8.02□□□□□ -1.13
LINC00539-201ENST00000411525 LYRM9A8MSI8 78 aa8.02□□□□□ -1.13
LINC00539-201ENST00000411525 H7C1H1 209 aa8.02□□□□□ -1.13
LINC00539-201ENST00000411525 ESDP10768 282 aa8.02□□□□□ -1.13
LINC00539-201ENST00000411525 PDZD11Q5EBL8 140 aa8.02□□□□□ -1.13
LINC00539-201ENST00000411525 RNASEKQ6P5S7 137 aaKnown RBP8.02□□□□□ -1.13
LINC00539-201ENST00000411525 RPL39LQ96EH5 51 aaKnown RBP8.02□□□□□ -1.13
LINC00539-201ENST00000411525 LOC389332A0A1B0GUA5 103 aa8.01□□□□□ -1.13
LINC00539-201ENST00000411525 LOC105371267A0A1B0GV96 52 aa8.01□□□□□ -1.13
LINC00539-201ENST00000411525 M0QY20 66 aa8.01□□□□□ -1.13
LINC00539-201ENST00000411525 CIDEAO60543 219 aa8.01□□□□□ -1.13
LINC00539-201ENST00000411525 IGHV3-53P01767 116 aa8.01□□□□□ -1.13
LINC00539-201ENST00000411525 S100A2P29034 98 aa8.01□□□□□ -1.13
LINC00539-201ENST00000411525 FAM222AQ5U5X8 452 aa8.01□□□□□ -1.13
LINC00539-201ENST00000411525 FA2HQ7L5A8 372 aa8.01□□□□□ -1.13
LINC00539-201ENST00000411525 NIT1Q86X76 327 aa8.01□□□□□ -1.13
LINC00539-201ENST00000411525 PRSS3P2Q8NHM4 247 aa8.01□□□□□ -1.13
LINC00539-201ENST00000411525 CHCHD1Q96BP2 118 aaKnown RBP8.01□□□□□ -1.13
LINC00539-201ENST00000411525 URB1-AS1Q96HZ7 61 aa8.01□□□□□ -1.13
LINC00539-201ENST00000411525 ZNF479Q96JC4 524 aa8.01□□□□□ -1.13
LINC00539-201ENST00000411525 C18orf15Q96N68 181 aa8.01□□□□□ -1.13
LINC00539-201ENST00000411525 C20orf78Q9BR46 151 aa8.01□□□□□ -1.13
LINC00539-201ENST00000411525 DEFB4AO15263 64 aa8□□□□□ -1.13
LINC00539-201ENST00000411525 NUPR1O60356 82 aa8□□□□□ -1.13
LINC00539-201ENST00000411525 HSBP1O75506 76 aa8□□□□□ -1.13
LINC00539-201ENST00000411525 LINC00614P0C842 121 aa8□□□□□ -1.13
LINC00539-201ENST00000411525 PMCHP20382 165 aa8□□□□□ -1.13
LINC00539-201ENST00000411525 IFI27P40305 119 aaPredicted RBP8□□□□□ -1.13
LINC00539-201ENST00000411525 SUMO2P61956 95 aaKnown RBP8□□□□□ -1.13
LINC00539-201ENST00000411525 NXT2Q9NPJ8 142 aaKnown RBP8□□□□□ -1.13
LINC00539-201ENST00000411525 DKK2Q9UBU2 259 aa8□□□□□ -1.13
LINC00539-201ENST00000411525 STARD9Q9P2P6 4700 aa8□□□□□ -1.13
LINC00539-201ENST00000411525 TRBV6-5A0A0K0K1A5 114 aa7.99□□□□□ -1.13
LINC00539-201ENST00000411525 IFITM10A6NMD0 228 aa7.99□□□□□ -1.13
LINC00539-201ENST00000411525 DEFB130BP0DP73 79 aa7.99□□□□□ -1.13
LINC00539-201ENST00000411525 DEFB130AP0DP74 79 aa7.99□□□□□ -1.13
LINC00539-201ENST00000411525 Q8N8P6 123 aa7.99□□□□□ -1.13
LINC00539-201ENST00000411525 SMIM2Q9BVW6 85 aa7.99□□□□□ -1.13
LINC00539-201ENST00000411525 C11orf68Q9H3H3 251 aaKnown RBP7.99□□□□□ -1.13
LINC00539-201ENST00000411525 ST20Q9HBF5 79 aa7.99□□□□□ -1.13
LINC00539-201ENST00000411525 NIT2Q9NQR4 276 aa7.99□□□□□ -1.13
LINC00539-201ENST00000411525 AP5S1Q9NUS5 200 aa7.99□□□□□ -1.13
LINC00539-201ENST00000411525 IGLV2-18A0A075B6J9 118 aa7.98□□□□□ -1.13
LINC00539-201ENST00000411525 TEX48A0A1B0GUV7 120 aa7.98□□□□□ -1.13
LINC00539-201ENST00000411525 K7EQD1 137 aa7.98□□□□□ -1.13
LINC00539-201ENST00000411525 SPART-AS1P0CW21 52 aa7.98□□□□□ -1.13
LINC00539-201ENST00000411525 AMTP48728 403 aa7.98□□□□□ -1.13
LINC00539-201ENST00000411525 RPL32P62910 135 aaKnown RBP7.98□□□□□ -1.13
LINC00539-201ENST00000411525 Q6ZSN1 163 aa7.98□□□□□ -1.13
LINC00539-201ENST00000411525 TMEM18Q96B42 140 aa7.98□□□□□ -1.13
LINC00539-201ENST00000411525 HIST1H2BLQ99880 126 aa7.98□□□□□ -1.13
LINC00539-201ENST00000411525 CELA1Q9UNI1 258 aa7.98□□□□□ -1.13
LINC00539-201ENST00000411525 SACSQ9NZJ4 4579 aa7.98□□□□□ -1.13
LINC00539-201ENST00000411525 TRGV4A0A0C4DH28 118 aa7.97□□□□□ -1.13
LINC00539-201ENST00000411525 SDHAF1A6NFY7 115 aa7.97□□□□□ -1.13
LINC00539-201ENST00000411525 LINC01546A6NGU7 62 aa7.97□□□□□ -1.13
LINC00539-201ENST00000411525 P0DMU3 169 aa7.97□□□□□ -1.13
LINC00539-201ENST00000411525 FAM231AP0DMU4 169 aa7.97□□□□□ -1.13
LINC00539-201ENST00000411525 FAM231CP0DMU5 169 aa7.97□□□□□ -1.13
LINC00539-201ENST00000411525 FABP4P15090 132 aa7.97□□□□□ -1.13
LINC00539-201ENST00000411525 DAD1P61803 113 aa7.97□□□□□ -1.13
LINC00539-201ENST00000411525 DNAJC30Q96LL9 226 aa7.97□□□□□ -1.13
LINC00539-201ENST00000411525 TMEM70Q9BUB7 260 aa7.97□□□□□ -1.13
LINC00539-201ENST00000411525 IGHV1-24A0A0C4DH33 117 aa7.96□□□□□ -1.14
LINC00539-201ENST00000411525 TRBV10-1A0A0K0K1A3 114 aa7.96□□□□□ -1.14
LINC00539-201ENST00000411525 POLR2KP53803 58 aaKnown RBP7.96□□□□□ -1.14
LINC00539-201ENST00000411525 FAM19A2Q8N3H0 131 aa7.96□□□□□ -1.14
LINC00539-201ENST00000411525 NEXN-AS1Q8NBZ9 246 aa7.96□□□□□ -1.14
LINC00539-201ENST00000411525 PACRGQ96M98 296 aaPredicted RBP7.96□□□□□ -1.14
LINC00539-201ENST00000411525 BIRC6Q9NR09 4857 aa7.96□□□□□ -1.14
LINC00539-201ENST00000411525 EPPK1P58107 5090 aaKnown RBP7.95□□□□□ -1.14
LINC00539-201ENST00000411525 TRBV6-4A0A1B0GX49 114 aa7.95□□□□□ -1.14
LINC00539-201ENST00000411525 K7EMI3 77 aa7.95□□□□□ -1.14
LINC00539-201ENST00000411525 VCYO14598 125 aa7.95□□□□□ -1.14
LINC00539-201ENST00000411525 FHL2Q14192 279 aa7.95□□□□□ -1.14
LINC00539-201ENST00000411525 RHOHQ15669 191 aa7.95□□□□□ -1.14
LINC00539-201ENST00000411525 PMCHL1Q16048 86 aa7.95□□□□□ -1.14
LINC00539-201ENST00000411525 NEGR1Q7Z3B1 354 aa7.95□□□□□ -1.14
LINC00539-201ENST00000411525 SLC25A29Q8N8R3 303 aa7.95□□□□□ -1.14
LINC00539-201ENST00000411525 TNFRSF18Q9Y5U5 241 aa7.95□□□□□ -1.14
LINC00539-201ENST00000411525 DNAH1Q9P2D7 4330 aa7.94□□□□□ -1.14
LINC00539-201ENST00000411525 A0A0J9YWU9 116 aa7.94□□□□□ -1.14
LINC00539-201ENST00000411525 TRBV27A0A0K0K1C4 114 aa7.94□□□□□ -1.14
LINC00539-201ENST00000411525 TCAPO15273 167 aa7.94□□□□□ -1.14
LINC00539-201ENST00000411525 HBDP02042 147 aa7.94□□□□□ -1.14
LINC00539-201ENST00000411525 AKR1D1P51857 326 aa7.94□□□□□ -1.14
LINC00539-201ENST00000411525 LAGE3Q14657 143 aa7.94□□□□□ -1.14
LINC00539-201ENST00000411525 ORMDL2Q53FV1 153 aa7.94□□□□□ -1.14
LINC00539-201ENST00000411525 KIR2DL4Q99706 377 aa7.94□□□□□ -1.14
LINC00539-201ENST00000411525 A0A096LNJ9 63 aa7.93□□□□□ -1.14
LINC00539-201ENST00000411525 I3L3M4 83 aa7.93□□□□□ -1.14
LINC00539-201ENST00000411525 ATP5G1P05496 136 aa7.93□□□□□ -1.14
LINC00539-201ENST00000411525 RPL36AP83881 106 aaKnown RBP7.93□□□□□ -1.14
LINC00539-201ENST00000411525 OR10D4PQ8NGN7 298 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms