RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 LY6HO94772 140 aa8.07□□□□□ -1.12
NIF3L1-204ENST00000409357 IGKV2D-40P01614 121 aaPredicted RBP8.07□□□□□ -1.12
NIF3L1-204ENST00000409357 MED14OSP0DP75 135 aa8.07□□□□□ -1.12
NIF3L1-204ENST00000409357 TMEM155Q4W5P6 130 aa8.07□□□□□ -1.12
NIF3L1-204ENST00000409357 C9orf153Q5TBE3 101 aa8.07□□□□□ -1.12
NIF3L1-204ENST00000409357 C2orf66Q6UXQ4 117 aa8.07□□□□□ -1.12
NIF3L1-204ENST00000409357 CCL13Q99616 98 aa8.07□□□□□ -1.12
NIF3L1-204ENST00000409357 MDFIQ99750 246 aa8.07□□□□□ -1.12
NIF3L1-204ENST00000409357 ZNRD1Q9P1U0 126 aa8.07□□□□□ -1.12
NIF3L1-204ENST00000409357 COL6A5A8TX70 2615 aa8.07□□□□□ -1.12
NIF3L1-204ENST00000409357 IGKV3D-20A0A0C4DH25 116 aa8.06□□□□□ -1.12
NIF3L1-204ENST00000409357 TEX49A0A1B0GTD5 131 aa8.06□□□□□ -1.12
NIF3L1-204ENST00000409357 A4D1N5 150 aa8.06□□□□□ -1.12
NIF3L1-204ENST00000409357 LY6G6DO95868 133 aa8.06□□□□□ -1.12
NIF3L1-204ENST00000409357 CRYGDP07320 174 aa8.06□□□□□ -1.12
NIF3L1-204ENST00000409357 PMVKQ15126 192 aa8.06□□□□□ -1.12
NIF3L1-204ENST00000409357 TMEM200BQ69YZ2 307 aa8.06□□□□□ -1.12
NIF3L1-204ENST00000409357 C2orf82Q6UX34 121 aa8.06□□□□□ -1.12
NIF3L1-204ENST00000409357 TRPT1Q86TN4 253 aaKnown RBP8.06□□□□□ -1.12
NIF3L1-204ENST00000409357 LINC00643Q86TS7 51 aa8.06□□□□□ -1.12
NIF3L1-204ENST00000409357 TIMM17AQ99595 171 aa8.06□□□□□ -1.12
NIF3L1-204ENST00000409357 CHCHD5Q9BSY4 110 aa8.06□□□□□ -1.12
NIF3L1-204ENST00000409357 C17orf100A8MU93 164 aa8.05□□□□□ -1.12
NIF3L1-204ENST00000409357 DLX6P56179 175 aa8.05□□□□□ -1.12
NIF3L1-204ENST00000409357 HERVK_113P63121 156 aa8.05□□□□□ -1.12
NIF3L1-204ENST00000409357 KRTAP1-1Q07627 177 aa8.05□□□□□ -1.12
NIF3L1-204ENST00000409357 MSMPQ1L6U9 139 aa8.05□□□□□ -1.12
NIF3L1-204ENST00000409357 DUX4L9Q6RFH8 374 aaPredicted RBP8.05□□□□□ -1.12
NIF3L1-204ENST00000409357 SFTA2Q6UW10 78 aa8.05□□□□□ -1.12
NIF3L1-204ENST00000409357 FAM19A5Q7Z5A7 132 aaPredicted RBP8.05□□□□□ -1.12
NIF3L1-204ENST00000409357 FAM216BQ8N7L0 139 aa8.05□□□□□ -1.12
NIF3L1-204ENST00000409357 CTSZQ9UBR2 303 aa8.05□□□□□ -1.12
NIF3L1-204ENST00000409357 LENEPQ9Y5L5 61 aa8.05□□□□□ -1.12
NIF3L1-204ENST00000409357 FBN1P35555 2871 aaKnown RBP8.05□□□□□ -1.12
NIF3L1-204ENST00000409357 IGIPA6NJ69 53 aa8.05□□□□□ -1.12
NIF3L1-204ENST00000409357 LEPROTO15243 131 aa8.05□□□□□ -1.12
NIF3L1-204ENST00000409357 TRGV3P03979 118 aa8.05□□□□□ -1.12
NIF3L1-204ENST00000409357 COX7CP15954 63 aa8.05□□□□□ -1.12
NIF3L1-204ENST00000409357 KLHL30-AS1Q8NEE0 82 aa8.05□□□□□ -1.12
NIF3L1-204ENST00000409357 MALRD1Q5VYJ5 2156 aa8.05□□□□□ -1.12
NIF3L1-204ENST00000409357 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.04□□□□□ -1.126e-8■■□□□ 12.2
NIF3L1-204ENST00000409357 IGHV4-30-2A0A087WSY4 118 aa8.04□□□□□ -1.12
NIF3L1-204ENST00000409357 H7C423 109 aa8.04□□□□□ -1.12
NIF3L1-204ENST00000409357 J3QQQ9 107 aa8.04□□□□□ -1.12
NIF3L1-204ENST00000409357 EIF4EBP3O60516 100 aaPredicted RBP8.04□□□□□ -1.12
NIF3L1-204ENST00000409357 COX6CP09669 75 aa8.04□□□□□ -1.12
NIF3L1-204ENST00000409357 MFAP4P55083 255 aa8.04□□□□□ -1.12
NIF3L1-204ENST00000409357 ZNF56Q15929 161 aa8.04□□□□□ -1.12
NIF3L1-204ENST00000409357 Q6ZS46 218 aa8.04□□□□□ -1.12
NIF3L1-204ENST00000409357 C5orf38Q86SI9 138 aa8.04□□□□□ -1.12
NIF3L1-204ENST00000409357 CFHR4Q92496 578 aa8.04□□□□□ -1.12
NIF3L1-204ENST00000409357 METTL26Q96S19 204 aa8.04□□□□□ -1.12
NIF3L1-204ENST00000409357 STAB1Q9NY15 2570 aa8.03□□□□□ -1.12
NIF3L1-204ENST00000409357 A0A096LNT2 108 aa8.03□□□□□ -1.12
NIF3L1-204ENST00000409357 ZNF876PQ49A33 203 aa8.03□□□□□ -1.12
NIF3L1-204ENST00000409357 MRAPQ8TCY5 172 aa8.03□□□□□ -1.12
NIF3L1-204ENST00000409357 DPH3P1Q9H4G8 78 aa8.03□□□□□ -1.12
NIF3L1-204ENST00000409357 TRGV11A0A075B6L2 103 aa8.02□□□□□ -1.13
NIF3L1-204ENST00000409357 IGHV4OR15-8A0A075B7B6 117 aa8.02□□□□□ -1.13
NIF3L1-204ENST00000409357 A0A087WW49 117 aa8.02□□□□□ -1.13
NIF3L1-204ENST00000409357 IGHV3-21A0A0B4J1V1 117 aa8.02□□□□□ -1.13
NIF3L1-204ENST00000409357 TMEM223A0PJW6 202 aa8.02□□□□□ -1.13
NIF3L1-204ENST00000409357 SPRY3O43610 288 aa8.02□□□□□ -1.13
NIF3L1-204ENST00000409357 IGHV1-46P01743 117 aa8.02□□□□□ -1.13
NIF3L1-204ENST00000409357 LGALS3P17931 250 aaKnown RBP8.02□□□□□ -1.13
NIF3L1-204ENST00000409357 HIST1H4AP62805 103 aaKnown RBP8.02□□□□□ -1.13
NIF3L1-204ENST00000409357 DNHD1Q96M86 4753 aa8.02□□□□□ -1.13
NIF3L1-204ENST00000409357 FAM236AA0A1B0GUQ0 79 aa8.02□□□□□ -1.13
NIF3L1-204ENST00000409357 FAM236BA0A1B0GV22 79 aa8.02□□□□□ -1.13
NIF3L1-204ENST00000409357 B9A039 149 aa8.02□□□□□ -1.13
NIF3L1-204ENST00000409357 INAFM1C9JVW0 142 aa8.02□□□□□ -1.13
NIF3L1-204ENST00000409357 LST1O00453 97 aa8.02□□□□□ -1.13
NIF3L1-204ENST00000409357 CCL3L1P16619 93 aa8.02□□□□□ -1.13
NIF3L1-204ENST00000409357 NUP37Q8NFH4 326 aa8.02□□□□□ -1.13
NIF3L1-204ENST00000409357 Q8TAT8 98 aa8.02□□□□□ -1.13
NIF3L1-204ENST00000409357 AGPAT4-IT1Q9H0P7 198 aa8.02□□□□□ -1.13
NIF3L1-204ENST00000409357 KAAG1Q9UBP8 84 aa8.02□□□□□ -1.13
NIF3L1-204ENST00000409357 SMAD5-AS1Q9Y6J3 95 aa8.02□□□□□ -1.13
NIF3L1-204ENST00000409357 ADARB2-AS1A8MUL3 147 aa8.01□□□□□ -1.13
NIF3L1-204ENST00000409357 IGHV1-69P01742 117 aa8.01□□□□□ -1.13
NIF3L1-204ENST00000409357 TMEM258P61165 79 aa8.01□□□□□ -1.13
NIF3L1-204ENST00000409357 SPANXN1Q5VSR9 72 aa8.01□□□□□ -1.13
NIF3L1-204ENST00000409357 C9orf47Q6ZRZ4 202 aa8.01□□□□□ -1.13
NIF3L1-204ENST00000409357 DYNAPQ8N1N2 210 aa8.01□□□□□ -1.13
NIF3L1-204ENST00000409357 C11orf21Q9P2W6 132 aa8.01□□□□□ -1.13
NIF3L1-204ENST00000409357 IGLV11-55A0A075B6I3 123 aa8□□□□□ -1.13
NIF3L1-204ENST00000409357 ATOX1O00244 68 aa8□□□□□ -1.13
NIF3L1-204ENST00000409357 TRIAP1O43715 76 aa8□□□□□ -1.13
NIF3L1-204ENST00000409357 ENSAO43768 121 aaKnown RBP8□□□□□ -1.13
NIF3L1-204ENST00000409357 TSHBP01222 138 aa8□□□□□ -1.13
NIF3L1-204ENST00000409357 IGLV1-47P01700 117 aa8□□□□□ -1.13
NIF3L1-204ENST00000409357 TSPEAR-AS2P59090 65 aa8□□□□□ -1.13
NIF3L1-204ENST00000409357 KLK9Q2XQG4 91 aa8□□□□□ -1.13
NIF3L1-204ENST00000409357 C2orf48Q96LS8 159 aa8□□□□□ -1.13
NIF3L1-204ENST00000409357 KLK9Q9UKQ9 250 aa8□□□□□ -1.13
NIF3L1-204ENST00000409357 IGHV1-8P0DP01 117 aa7.99□□□□□ -1.13
NIF3L1-204ENST00000409357 GAGE2AQ6NT46 116 aa7.99□□□□□ -1.13
NIF3L1-204ENST00000409357 MUSTN1Q8IVN3 82 aa7.99□□□□□ -1.13
NIF3L1-204ENST00000409357 DEFB108BQ8NET1 73 aa7.99□□□□□ -1.13
NIF3L1-204ENST00000409357 C10orf105Q8TEF2 133 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms