RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 NEXN-AS1Q8NBZ9 246 aa12.48□□□□□ -0.41
SDCBP2-201ENST00000339987 DNAJC30Q96LL9 226 aa12.48□□□□□ -0.41
SDCBP2-201ENST00000339987 MRPL18Q9H0U6 180 aaKnown RBP12.48□□□□□ -0.41
SDCBP2-201ENST00000339987 KLK5Q9Y337 293 aaPredicted RBP12.48□□□□□ -0.41
SDCBP2-201ENST00000339987 LOC100131303A0A0U1RQF7 123 aa12.47□□□□□ -0.41
SDCBP2-201ENST00000339987 CKS2P33552 79 aa12.47□□□□□ -0.41
SDCBP2-201ENST00000339987 C15orf53Q8NAA6 179 aa12.47□□□□□ -0.41
SDCBP2-201ENST00000339987 NIT2Q9NQR4 276 aa12.47□□□□□ -0.41
SDCBP2-201ENST00000339987 Q9UF83 564 aa12.47□□□□□ -0.41
SDCBP2-201ENST00000339987 IGLL5B9A064 214 aa12.46□□□□□ -0.41
SDCBP2-201ENST00000339987 D6R8Y8 96 aa12.46□□□□□ -0.41
SDCBP2-201ENST00000339987 SMKR1H3BMG3 65 aa12.46□□□□□ -0.41
SDCBP2-201ENST00000339987 GAS8-AS1O95177 125 aa12.46□□□□□ -0.41
SDCBP2-201ENST00000339987 NCR2O95944 276 aa12.46□□□□□ -0.41
SDCBP2-201ENST00000339987 PPP1R17O96001 155 aa12.46□□□□□ -0.41
SDCBP2-201ENST00000339987 LINC00694P0DN24 101 aa12.46□□□□□ -0.41
SDCBP2-201ENST00000339987 RPL36AP83881 106 aaKnown RBP12.46□□□□□ -0.41
SDCBP2-201ENST00000339987 ORMDL3Q8N138 153 aa12.46□□□□□ -0.41
SDCBP2-201ENST00000339987 RPL36ALQ969Q0 106 aaKnown RBP12.46□□□□□ -0.41
SDCBP2-201ENST00000339987 ICOSQ9Y6W8 199 aa12.46□□□□□ -0.41
SDCBP2-201ENST00000339987 TRBV6-5A0A0K0K1A5 114 aa12.45□□□□□ -0.42
SDCBP2-201ENST00000339987 MRPL23Q16540 153 aaKnown RBP12.45□□□□□ -0.42
SDCBP2-201ENST00000339987 NRACQ8N912 160 aa12.45□□□□□ -0.42
SDCBP2-201ENST00000339987 RPL39LQ96EH5 51 aaKnown RBP12.45□□□□□ -0.42
SDCBP2-201ENST00000339987 TRBV7-3A0A075B6L6 115 aa12.45□□□□□ -0.42
SDCBP2-201ENST00000339987 GAGE12JA6NER3 117 aa12.45□□□□□ -0.42
SDCBP2-201ENST00000339987 PHOX2AO14813 284 aa12.45□□□□□ -0.42
SDCBP2-201ENST00000339987 TCTAP57738 103 aa12.45□□□□□ -0.42
SDCBP2-201ENST00000339987 GAGE1Q13065 139 aa12.45□□□□□ -0.42
SDCBP2-201ENST00000339987 GAGE4Q13068 117 aa12.45□□□□□ -0.42
SDCBP2-201ENST00000339987 GAGE5Q13069 117 aa12.45□□□□□ -0.42
SDCBP2-201ENST00000339987 GAGE13Q4V321 117 aa12.45□□□□□ -0.42
SDCBP2-201ENST00000339987 OR10J3Q5JRS4 329 aa12.45□□□□□ -0.42
SDCBP2-201ENST00000339987 ZFAND6Q6FIF0 208 aa12.45□□□□□ -0.42
SDCBP2-201ENST00000339987 SH2D6Q7Z4S9 175 aa12.45□□□□□ -0.42
SDCBP2-201ENST00000339987 LAMTOR2Q9Y2Q5 125 aa12.45□□□□□ -0.42
SDCBP2-201ENST00000339987 TNFRSF18Q9Y5U5 241 aa12.45□□□□□ -0.42
SDCBP2-201ENST00000339987 A0A096LPF7 62 aa12.44□□□□□ -0.42
SDCBP2-201ENST00000339987 C3orf84H3BNL1 204 aa12.44□□□□□ -0.42
SDCBP2-201ENST00000339987 HIST1H2BKO60814 126 aa12.44□□□□□ -0.42
SDCBP2-201ENST00000339987 HIST1H2BJP06899 126 aa12.44□□□□□ -0.42
SDCBP2-201ENST00000339987 HIST1H2BOP23527 126 aa12.44□□□□□ -0.42
SDCBP2-201ENST00000339987 HIST1H2BBP33778 126 aa12.44□□□□□ -0.42
SDCBP2-201ENST00000339987 HIST1H2BDP58876 126 aa12.44□□□□□ -0.42
SDCBP2-201ENST00000339987 UBE2D3P61077 147 aa12.44□□□□□ -0.42
SDCBP2-201ENST00000339987 HIST1H2BCP62807 126 aa12.44□□□□□ -0.42
SDCBP2-201ENST00000339987 UBE2D2P62837 147 aa12.44□□□□□ -0.42
SDCBP2-201ENST00000339987 HIST2H2BEQ16778 126 aa12.44□□□□□ -0.42
SDCBP2-201ENST00000339987 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.44□□□□□ -0.42
SDCBP2-201ENST00000339987 ZNRF2Q8NHG8 242 aa12.44□□□□□ -0.42
SDCBP2-201ENST00000339987 HIST1H2BHQ93079 126 aa12.44□□□□□ -0.42
SDCBP2-201ENST00000339987 PRELID3AQ96N28 172 aa12.44□□□□□ -0.42
SDCBP2-201ENST00000339987 HIST1H2BNQ99877 126 aa12.44□□□□□ -0.42
SDCBP2-201ENST00000339987 HIST1H2BMQ99879 126 aa12.44□□□□□ -0.42
SDCBP2-201ENST00000339987 NUDT3O95989 172 aa12.43□□□□□ -0.42
SDCBP2-201ENST00000339987 SRIP30626 198 aa12.43□□□□□ -0.42
SDCBP2-201ENST00000339987 KIAA1644Q3SXP7 199 aa12.43□□□□□ -0.42
SDCBP2-201ENST00000339987 TNFRSF6BO95407 300 aa12.42□□□□□ -0.42
SDCBP2-201ENST00000339987 C20orf78Q9BR46 151 aa12.42□□□□□ -0.42
SDCBP2-201ENST00000339987 ST20Q9HBF5 79 aa12.42□□□□□ -0.42
SDCBP2-201ENST00000339987 APLNQ9ULZ1 77 aa12.42□□□□□ -0.42
SDCBP2-201ENST00000339987 NPYP01303 97 aa12.41□□□□□ -0.42
SDCBP2-201ENST00000339987 NDUFA6P56556 154 aa12.41□□□□□ -0.42
SDCBP2-201ENST00000339987 NEGR1Q7Z3B1 354 aa12.41□□□□□ -0.42
SDCBP2-201ENST00000339987 ALKBH7Q9BT30 221 aaPredicted RBP12.41□□□□□ -0.42
SDCBP2-201ENST00000339987 SUMO2P61956 95 aaKnown RBP12.4□□□□□ -0.42
SDCBP2-201ENST00000339987 RPL32P62910 135 aaKnown RBP12.4□□□□□ -0.42
SDCBP2-201ENST00000339987 ATP6V0E2Q8NHE4 81 aa12.4□□□□□ -0.42
SDCBP2-201ENST00000339987 DYNC2H1Q8NCM8 4307 aaKnown RBP12.4□□□□□ -0.42
SDCBP2-201ENST00000339987 SDHAF1A6NFY7 115 aa12.39□□□□□ -0.43
SDCBP2-201ENST00000339987 POLR2KP53803 58 aaKnown RBP12.39□□□□□ -0.43
SDCBP2-201ENST00000339987 DAZ4Q86SG3 579 aaKnown RBP12.39□□□□□ -0.43
SDCBP2-201ENST00000339987 TMEM70Q9BUB7 260 aa12.39□□□□□ -0.43
SDCBP2-201ENST00000339987 DAZ3Q9NR90 486 aaKnown RBP12.39□□□□□ -0.43
SDCBP2-201ENST00000339987 KMT2CQ8NEZ4 4911 aaKnown RBP12.39□□□□□ -0.43
SDCBP2-201ENST00000339987 PRSS47A8MTI9 375 aa12.38□□□□□ -0.43
SDCBP2-201ENST00000339987 TIRAPP58753 221 aa12.38□□□□□ -0.43
SDCBP2-201ENST00000339987 SNRPEP62304 92 aaKnown RBP12.38□□□□□ -0.43
SDCBP2-201ENST00000339987 CASC10Q5T4H9 136 aa12.38□□□□□ -0.43
SDCBP2-201ENST00000339987 TRBV27A0A0K0K1C4 114 aa12.37□□□□□ -0.43
SDCBP2-201ENST00000339987 GTSF1LQ9H1H1 148 aa12.37□□□□□ -0.43
SDCBP2-201ENST00000339987 MAP1LC3AQ9H492 121 aa12.37□□□□□ -0.43
SDCBP2-201ENST00000339987 LOC105371267A0A1B0GV96 52 aa12.37□□□□□ -0.43
SDCBP2-201ENST00000339987 C5orf52A6NGY3 159 aa12.37□□□□□ -0.43
SDCBP2-201ENST00000339987 SMIM2Q9BVW6 85 aa12.37□□□□□ -0.43
SDCBP2-201ENST00000339987 RYR3Q15413 4870 aa12.36□□□□□ -0.43
SDCBP2-201ENST00000339987 VCYO14598 125 aa12.36□□□□□ -0.43
SDCBP2-201ENST00000339987 TMEM97Q5BJF2 176 aa12.36□□□□□ -0.43
SDCBP2-201ENST00000339987 IGHV3-38A0A0C4DH36 116 aa12.35□□□□□ -0.43
SDCBP2-201ENST00000339987 I3L3M4 83 aa12.35□□□□□ -0.43
SDCBP2-201ENST00000339987 S100A2P29034 98 aa12.35□□□□□ -0.43
SDCBP2-201ENST00000339987 LYPD5Q6UWN5 251 aa12.35□□□□□ -0.43
SDCBP2-201ENST00000339987 BAGE3Q86Y29 109 aa12.35□□□□□ -0.43
SDCBP2-201ENST00000339987 PMCHP20382 165 aa12.34□□□□□ -0.43
SDCBP2-201ENST00000339987 ESRGQ1W209 222 aa12.34□□□□□ -0.43
SDCBP2-201ENST00000339987 CSMD3Q7Z407 3707 aa12.34□□□□□ -0.43
SDCBP2-201ENST00000339987 STARD9Q9P2P6 4700 aa12.33□□□□□ -0.44
SDCBP2-201ENST00000339987 IGLV2-18A0A075B6J9 118 aa12.33□□□□□ -0.44
SDCBP2-201ENST00000339987 Q0VG73 95 aa12.33□□□□□ -0.44
SDCBP2-201ENST00000339987 COTL1Q14019 142 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 180.4 ms