RNA–Protein interactions for RNA: ENST00000308961.4

NDUFA11-201, Transcript of NADH:ubiquinone oxidoreductase subunit A11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFA11, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA11-201ENST00000308961 IGLL5B9A064 214 aa11.9□□□□□ -0.5
NDUFA11-201ENST00000308961 CKS2P33552 79 aa11.9□□□□□ -0.5
NDUFA11-201ENST00000308961 ZNRF2Q8NHG8 242 aa11.9□□□□□ -0.5
NDUFA11-201ENST00000308961 MUC7Q8TAX7 377 aa11.9□□□□□ -0.5
NDUFA11-201ENST00000308961 FRZBQ92765 325 aa11.9□□□□□ -0.5
NDUFA11-201ENST00000308961 PRADC1Q9BSG0 188 aa11.9□□□□□ -0.5
NDUFA11-201ENST00000308961 MT-ND6P03923 174 aa11.89□□□□□ -0.51
NDUFA11-201ENST00000308961 NIT2Q9NQR4 276 aa11.89□□□□□ -0.51
NDUFA11-201ENST00000308961 A0A096LPF7 62 aa11.88□□□□□ -0.51
NDUFA11-201ENST00000308961 TRBV10-1A0A0K0K1A3 114 aa11.88□□□□□ -0.51
NDUFA11-201ENST00000308961 H3BNG1 76 aa11.88□□□□□ -0.51
NDUFA11-201ENST00000308961 H7C1H1 209 aa11.88□□□□□ -0.51
NDUFA11-201ENST00000308961 NPYP01303 97 aa11.88□□□□□ -0.51
NDUFA11-201ENST00000308961 LINC00694P0DN24 101 aa11.88□□□□□ -0.51
NDUFA11-201ENST00000308961 PHOX2AO14813 284 aa11.87□□□□□ -0.51
NDUFA11-201ENST00000308961 TNFRSF6BO95407 300 aa11.87□□□□□ -0.51
NDUFA11-201ENST00000308961 TRGC2P03986 189 aa11.87□□□□□ -0.51
NDUFA11-201ENST00000308961 OR10J3Q5JRS4 329 aa11.87□□□□□ -0.51
NDUFA11-201ENST00000308961 ORMDL3Q8N138 153 aa11.87□□□□□ -0.51
NDUFA11-201ENST00000308961 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.87□□□□□ -0.51
NDUFA11-201ENST00000308961 PRELID3AQ96N28 172 aa11.87□□□□□ -0.51
NDUFA11-201ENST00000308961 TGP01266 2768 aa11.87□□□□□ -0.51
NDUFA11-201ENST00000308961 TRBV7-3A0A075B6L6 115 aa11.86□□□□□ -0.51
NDUFA11-201ENST00000308961 NUPR2A6NF83 97 aa11.86□□□□□ -0.51
NDUFA11-201ENST00000308961 NUDT3O95989 172 aa11.86□□□□□ -0.51
NDUFA11-201ENST00000308961 PPBPP02775 128 aa11.86□□□□□ -0.51
NDUFA11-201ENST00000308961 UBE2D3P61077 147 aa11.86□□□□□ -0.51
NDUFA11-201ENST00000308961 UBE2D2P62837 147 aa11.86□□□□□ -0.51
NDUFA11-201ENST00000308961 DNAJC30Q96LL9 226 aa11.86□□□□□ -0.51
NDUFA11-201ENST00000308961 ALKBH7Q9BT30 221 aaPredicted RBP11.86□□□□□ -0.51
NDUFA11-201ENST00000308961 APLNQ9ULZ1 77 aa11.86□□□□□ -0.51
NDUFA11-201ENST00000308961 TNFRSF18Q9Y5U5 241 aa11.86□□□□□ -0.51
NDUFA11-201ENST00000308961 TRBV6-5A0A0K0K1A5 114 aa11.85□□□□□ -0.51
NDUFA11-201ENST00000308961 RPL36AP83881 106 aaKnown RBP11.85□□□□□ -0.51
NDUFA11-201ENST00000308961 MRPL23Q16540 153 aaKnown RBP11.85□□□□□ -0.51
NDUFA11-201ENST00000308961 DEFB104AQ8WTQ1 72 aa11.85□□□□□ -0.51
NDUFA11-201ENST00000308961 RPL36ALQ969Q0 106 aaKnown RBP11.85□□□□□ -0.51
NDUFA11-201ENST00000308961 ICOSQ9Y6W8 199 aa11.85□□□□□ -0.51
NDUFA11-201ENST00000308961 IGHV3-38A0A0C4DH36 116 aa11.84□□□□□ -0.51
NDUFA11-201ENST00000308961 NEGR1Q7Z3B1 354 aa11.84□□□□□ -0.51
NDUFA11-201ENST00000308961 ST20Q9HBF5 79 aa11.84□□□□□ -0.51
NDUFA11-201ENST00000308961 SRIP30626 198 aa11.83□□□□□ -0.52
NDUFA11-201ENST00000308961 POLR2KP53803 58 aaKnown RBP11.83□□□□□ -0.52
NDUFA11-201ENST00000308961 KLK5Q9Y337 293 aaPredicted RBP11.83□□□□□ -0.52
NDUFA11-201ENST00000308961 SDHAF1A6NFY7 115 aa11.82□□□□□ -0.52
NDUFA11-201ENST00000308961 SUMO2P61956 95 aaKnown RBP11.82□□□□□ -0.52
NDUFA11-201ENST00000308961 C15orf53Q8NAA6 179 aa11.82□□□□□ -0.52
NDUFA11-201ENST00000308961 ATP6V0E2Q8NHE4 81 aa11.82□□□□□ -0.52
NDUFA11-201ENST00000308961 TMEM70Q9BUB7 260 aa11.82□□□□□ -0.52
NDUFA11-201ENST00000308961 LOC389332A0A1B0GUA5 103 aa11.81□□□□□ -0.52
NDUFA11-201ENST00000308961 PPP1R17O96001 155 aa11.81□□□□□ -0.52
NDUFA11-201ENST00000308961 IQCJQ1A5X6 159 aa11.81□□□□□ -0.52
NDUFA11-201ENST00000308961 C20orf78Q9BR46 151 aa11.81□□□□□ -0.52
NDUFA11-201ENST00000308961 LAMTOR2Q9Y2Q5 125 aa11.81□□□□□ -0.52
NDUFA11-201ENST00000308961 DNAH7Q8WXX0 4024 aa11.8□□□□□ -0.52
NDUFA11-201ENST00000308961 PRSS47A8MTI9 375 aa11.8□□□□□ -0.52
NDUFA11-201ENST00000308961 ESRGQ1W209 222 aa11.8□□□□□ -0.52
NDUFA11-201ENST00000308961 CASC10Q5T4H9 136 aa11.8□□□□□ -0.52
NDUFA11-201ENST00000308961 LYPD5Q6UWN5 251 aa11.8□□□□□ -0.52
NDUFA11-201ENST00000308961 DYNC2H1Q8NCM8 4307 aaKnown RBP11.79□□□□□ -0.52
NDUFA11-201ENST00000308961 IGLV2-18A0A075B6J9 118 aa11.79□□□□□ -0.52
NDUFA11-201ENST00000308961 NTM-AS1Q6ZSK4 140 aa11.79□□□□□ -0.52
NDUFA11-201ENST00000308961 TRBV27A0A0K0K1C4 114 aa11.78□□□□□ -0.52
NDUFA11-201ENST00000308961 C3orf84H3BNL1 204 aa11.78□□□□□ -0.52
NDUFA11-201ENST00000308961 VCYO14598 125 aa11.78□□□□□ -0.52
NDUFA11-201ENST00000308961 PMCHP20382 165 aa11.78□□□□□ -0.52
NDUFA11-201ENST00000308961 RPL32P62910 135 aaKnown RBP11.78□□□□□ -0.52
NDUFA11-201ENST00000308961 DAZ4Q86SG3 579 aaKnown RBP11.78□□□□□ -0.52
NDUFA11-201ENST00000308961 C18orf32Q8TCD1 76 aa11.78□□□□□ -0.52
NDUFA11-201ENST00000308961 SMIM2Q9BVW6 85 aa11.78□□□□□ -0.52
NDUFA11-201ENST00000308961 GTSF1LQ9H1H1 148 aa11.78□□□□□ -0.52
NDUFA11-201ENST00000308961 MAP1LC3AQ9H492 121 aa11.78□□□□□ -0.52
NDUFA11-201ENST00000308961 DAZ3Q9NR90 486 aaKnown RBP11.78□□□□□ -0.52
NDUFA11-201ENST00000308961 I3L3M4 83 aa11.77□□□□□ -0.53
NDUFA11-201ENST00000308961 TSHBP01222 138 aa11.77□□□□□ -0.53
NDUFA11-201ENST00000308961 IFI27P40305 119 aaPredicted RBP11.77□□□□□ -0.53
NDUFA11-201ENST00000308961 SH2D6Q7Z4S9 175 aa11.77□□□□□ -0.53
NDUFA11-201ENST00000308961 Q8N8P6 123 aa11.76□□□□□ -0.53
NDUFA11-201ENST00000308961 URB1-AS1Q96HZ7 61 aa11.76□□□□□ -0.53
NDUFA11-201ENST00000308961 TCAPO15273 167 aa11.75□□□□□ -0.53
NDUFA11-201ENST00000308961 TCTAP57738 103 aa11.75□□□□□ -0.53
NDUFA11-201ENST00000308961 LINC00588Q9Y4M8 146 aa11.75□□□□□ -0.53
NDUFA11-201ENST00000308961 TIRAPP58753 221 aa11.74□□□□□ -0.53
NDUFA11-201ENST00000308961 HIST1H2BKO60814 126 aa11.73□□□□□ -0.53
NDUFA11-201ENST00000308961 HIST1H2BJP06899 126 aa11.73□□□□□ -0.53
NDUFA11-201ENST00000308961 HIST1H2BOP23527 126 aa11.73□□□□□ -0.53
NDUFA11-201ENST00000308961 HIST1H2BBP33778 126 aa11.73□□□□□ -0.53
NDUFA11-201ENST00000308961 HIST1H2BDP58876 126 aa11.73□□□□□ -0.53
NDUFA11-201ENST00000308961 HIST1H2BCP62807 126 aa11.73□□□□□ -0.53
NDUFA11-201ENST00000308961 COTL1Q14019 142 aa11.73□□□□□ -0.53
NDUFA11-201ENST00000308961 HIST2H2BEQ16778 126 aa11.73□□□□□ -0.53
NDUFA11-201ENST00000308961 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.73□□□□□ -0.53
NDUFA11-201ENST00000308961 PRSS3P2Q8NHM4 247 aa11.73□□□□□ -0.53
NDUFA11-201ENST00000308961 HIST1H2BHQ93079 126 aa11.73□□□□□ -0.53
NDUFA11-201ENST00000308961 HIST1H2BNQ99877 126 aa11.73□□□□□ -0.53
NDUFA11-201ENST00000308961 HIST1H2BMQ99879 126 aa11.73□□□□□ -0.53
NDUFA11-201ENST00000308961 TRBV6-8A0A0A6YYG3 113 aa11.72□□□□□ -0.53
NDUFA11-201ENST00000308961 C1orf196B1AJZ1 125 aa11.72□□□□□ -0.53
NDUFA11-201ENST00000308961 Q0VG73 95 aa11.72□□□□□ -0.53
NDUFA11-201ENST00000308961 NIT1Q86X76 327 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms