RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 IGKCP01834 107 aa16.34■□□□□ 0.21
PDLIM2-202ENST00000308354 ZNF56Q15929 161 aa16.34■□□□□ 0.21
PDLIM2-202ENST00000308354 DEFB104AQ8WTQ1 72 aa16.34■□□□□ 0.21
PDLIM2-202ENST00000308354 HHLA3Q9XRX5 114 aa16.34■□□□□ 0.21
PDLIM2-202ENST00000308354 AZU1P20160 251 aa16.33■□□□□ 0.2
PDLIM2-202ENST00000308354 G0S2P27469 103 aa16.33■□□□□ 0.2
PDLIM2-202ENST00000308354 MRPL35Q9NZE8 188 aaKnown RBP16.33■□□□□ 0.2
PDLIM2-202ENST00000308354 C2orf66Q6UXQ4 117 aa16.33■□□□□ 0.2
PDLIM2-202ENST00000308354 SCGB3A1Q96QR1 104 aa16.33■□□□□ 0.2
PDLIM2-202ENST00000308354 CITED1Q99966 193 aa16.33■□□□□ 0.2
PDLIM2-202ENST00000308354 DPM2O94777 84 aa16.32■□□□□ 0.2
PDLIM2-202ENST00000308354 NMUP48645 174 aa16.32■□□□□ 0.2
PDLIM2-202ENST00000308354 CMC4P56277 68 aaPredicted RBP16.32■□□□□ 0.2
PDLIM2-202ENST00000308354 ZNF25P17030 456 aaPredicted RBP16.31■□□□□ 0.2
PDLIM2-202ENST00000308354 POLR2KP53803 58 aaKnown RBP16.31■□□□□ 0.2
PDLIM2-202ENST00000308354 C11orf72Q8NBR9 251 aa16.31■□□□□ 0.2
PDLIM2-202ENST00000308354 IGHV3-73A0A0B4J1V6 119 aa16.31■□□□□ 0.2
PDLIM2-202ENST00000308354 ZNF415Q09FC8 603 aa16.31■□□□□ 0.2
PDLIM2-202ENST00000308354 PCP2Q8IVA1 136 aa16.31■□□□□ 0.2
PDLIM2-202ENST00000308354 BOD1L2Q8IYS8 172 aa16.31■□□□□ 0.2
PDLIM2-202ENST00000308354 A0A087WX48 190 aa16.3■□□□□ 0.2
PDLIM2-202ENST00000308354 GIG44P09565 113 aaPredicted RBP16.3■□□□□ 0.2
PDLIM2-202ENST00000308354 RPL32P62910 135 aaKnown RBP16.3■□□□□ 0.2
PDLIM2-202ENST00000308354 SDHAF1A6NFY7 115 aa16.3■□□□□ 0.2
PDLIM2-202ENST00000308354 M0QY20 66 aa16.29■□□□□ 0.2
PDLIM2-202ENST00000308354 BVES-AS1Q5T3Y7 98 aa16.29■□□□□ 0.2
PDLIM2-202ENST00000308354 MORN3Q6PF18 240 aaPredicted RBP16.29■□□□□ 0.2
PDLIM2-202ENST00000308354 FAM110AQ9BQ89 295 aa16.29■□□□□ 0.2
PDLIM2-202ENST00000308354 TRRAPQ9Y4A5 3859 aa16.29■□□□□ 0.2
PDLIM2-202ENST00000308354 IGKV2D-26A0A0A0MRZ7 120 aa16.29■□□□□ 0.2
PDLIM2-202ENST00000308354 M0R2P5 195 aa16.29■□□□□ 0.2
PDLIM2-202ENST00000308354 ZC2HC1BQ5TFG8 222 aa16.28■□□□□ 0.2
PDLIM2-202ENST00000308354 MRPL16Q9NX20 251 aaKnown RBP16.28■□□□□ 0.2
PDLIM2-202ENST00000308354 NACAE9PAV3 2078 aa16.27■□□□□ 0.2
PDLIM2-202ENST00000308354 VCYO14598 125 aa16.27■□□□□ 0.2
PDLIM2-202ENST00000308354 Q6ZVH6 145 aa16.27■□□□□ 0.2
PDLIM2-202ENST00000308354 GTSCR1Q86UQ5 136 aa16.27■□□□□ 0.2
PDLIM2-202ENST00000308354 LINC00467Q9BRT7 94 aa16.27■□□□□ 0.2
PDLIM2-202ENST00000308354 TRBV6-5A0A0K0K1A5 114 aa16.27■□□□□ 0.19
PDLIM2-202ENST00000308354 C12orf54Q6X4T0 127 aa16.27■□□□□ 0.19
PDLIM2-202ENST00000308354 ZFP2Q6ZN57 461 aa16.27■□□□□ 0.19
PDLIM2-202ENST00000308354 TRAV12-1A0A0B4J245 112 aa16.26■□□□□ 0.19
PDLIM2-202ENST00000308354 KIR2DL4Q99706 377 aa16.26■□□□□ 0.19
PDLIM2-202ENST00000308354 NEXN-AS1Q8NBZ9 246 aa16.26■□□□□ 0.19
PDLIM2-202ENST00000308354 TRBV27A0A0K0K1C4 114 aa16.25■□□□□ 0.19
PDLIM2-202ENST00000308354 BAALCQ8WXS3 180 aa16.25■□□□□ 0.19
PDLIM2-202ENST00000308354 ERASQ7Z444 233 aa16.25■□□□□ 0.19
PDLIM2-202ENST00000308354 TTTY13Q9BZ97 58 aa16.25■□□□□ 0.19
PDLIM2-202ENST00000308354 CYSLTR1Q9Y271 337 aa16.25■□□□□ 0.19
PDLIM2-202ENST00000308354 TP53TG1Q9Y2A0 90 aa16.25■□□□□ 0.19
PDLIM2-202ENST00000308354 F8VRH5 84 aa16.24■□□□□ 0.19
PDLIM2-202ENST00000308354 H7C1H1 209 aa16.24■□□□□ 0.19
PDLIM2-202ENST00000308354 DLEU1O43261 78 aa16.23■□□□□ 0.19
PDLIM2-202ENST00000308354 PLNP26678 52 aa16.23■□□□□ 0.19
PDLIM2-202ENST00000308354 GAGE1Q13065 139 aa16.23■□□□□ 0.19
PDLIM2-202ENST00000308354 C9orf66Q5T8R8 295 aa16.23■□□□□ 0.19
PDLIM2-202ENST00000308354 CHTOPQ9Y3Y2 248 aaKnown RBP16.23■□□□□ 0.19
PDLIM2-202ENST00000308354 RPL39P62891 51 aaKnown RBP16.23■□□□□ 0.19
PDLIM2-202ENST00000308354 P0DMU3 169 aa16.22■□□□□ 0.19
PDLIM2-202ENST00000308354 FAM231AP0DMU4 169 aa16.22■□□□□ 0.19
PDLIM2-202ENST00000308354 FAM231CP0DMU5 169 aa16.22■□□□□ 0.19
PDLIM2-202ENST00000308354 INSL3P51460 131 aa16.21■□□□□ 0.19
PDLIM2-202ENST00000308354 CFAP126Q5VTH2 177 aa16.21■□□□□ 0.19
PDLIM2-202ENST00000308354 RNASE8Q8TDE3 154 aaKnown RBP16.21■□□□□ 0.19
PDLIM2-202ENST00000308354 SPXQ9BT56 116 aa16.21■□□□□ 0.19
PDLIM2-202ENST00000308354 FBN1P35555 2871 aaKnown RBP16.21■□□□□ 0.19
PDLIM2-202ENST00000308354 A8MWV9 139 aa16.21■□□□□ 0.18
PDLIM2-202ENST00000308354 KRTAP24-1Q3LI83 254 aa16.21■□□□□ 0.18
PDLIM2-202ENST00000308354 PRSS29PA6NIE9 313 aa16.2■□□□□ 0.18
PDLIM2-202ENST00000308354 TSHBP01222 138 aa16.2■□□□□ 0.18
PDLIM2-202ENST00000308354 TMEM97Q5BJF2 176 aa16.2■□□□□ 0.18
PDLIM2-202ENST00000308354 Q6ZSN1 163 aa16.2■□□□□ 0.18
PDLIM2-202ENST00000308354 Q9UF83 564 aa16.2■□□□□ 0.18
PDLIM2-202ENST00000308354 UFSP1Q6NVU6 142 aa16.19■□□□□ 0.18
PDLIM2-202ENST00000308354 CSNK1G2-AS1Q8NCQ2 148 aa16.19■□□□□ 0.18
PDLIM2-202ENST00000308354 COX11Q9Y6N1 276 aa16.19■□□□□ 0.18
PDLIM2-202ENST00000308354 IGIPA6NJ69 53 aa16.19■□□□□ 0.18
PDLIM2-202ENST00000308354 SIVA1O15304 175 aa16.19■□□□□ 0.18
PDLIM2-202ENST00000308354 RIPPLY3P57055 190 aa16.19■□□□□ 0.18
PDLIM2-202ENST00000308354 TRGV1A0A0A0MS02 117 aa16.18■□□□□ 0.18
PDLIM2-202ENST00000308354 TMEM263Q8WUH6 116 aaKnown RBP16.18■□□□□ 0.18
PDLIM2-202ENST00000308354 C1QTNF4Q9BXJ3 329 aa16.17■□□□□ 0.18
PDLIM2-202ENST00000308354 NPSP0C0P6 89 aa16.17■□□□□ 0.18
PDLIM2-202ENST00000308354 IL17DQ8TAD2 202 aa16.17■□□□□ 0.18
PDLIM2-202ENST00000308354 PTH2Q96A98 100 aa16.17■□□□□ 0.18
PDLIM2-202ENST00000308354 PIK3CD-AS1Q5SR53 167 aa16.16■□□□□ 0.18
PDLIM2-202ENST00000308354 Q6ZTI0 123 aa16.16■□□□□ 0.18
PDLIM2-202ENST00000308354 TAX1BP3O14907 124 aa16.15■□□□□ 0.18
PDLIM2-202ENST00000308354 NOP10Q9NPE3 64 aaKnown RBP16.15■□□□□ 0.18
PDLIM2-202ENST00000308354 TRAV8-6A0A0B4J262 113 aa16.15■□□□□ 0.18
PDLIM2-202ENST00000308354 LINC01549A6NIU2 74 aa16.15■□□□□ 0.18
PDLIM2-202ENST00000308354 I3L3M4 83 aa16.15■□□□□ 0.18
PDLIM2-202ENST00000308354 HSD52Q0P140 79 aa16.15■□□□□ 0.18
PDLIM2-202ENST00000308354 ORAOV1Q8WV07 137 aa16.15■□□□□ 0.18
PDLIM2-202ENST00000308354 RHOHQ15669 191 aa16.14■□□□□ 0.17
PDLIM2-202ENST00000308354 TIMM17AQ99595 171 aa16.14■□□□□ 0.17
PDLIM2-202ENST00000308354 EDA2RQ9HAV5 297 aa16.14■□□□□ 0.17
PDLIM2-202ENST00000308354 NBEAL2Q6ZNJ1 2754 aa16.13■□□□□ 0.17
PDLIM2-202ENST00000308354 RS1O15537 224 aa16.13■□□□□ 0.17
PDLIM2-202ENST00000308354 MAPKAPK5-AS1Q8N8E1 139 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms