RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 CSTL1Q9H114 145 aa12.91□□□□□ -0.34
SSB-201ENST00000260956 TRGV11A0A075B6L2 103 aa12.9□□□□□ -0.34
SSB-201ENST00000260956 IGKV2D-26A0A0A0MRZ7 120 aa12.9□□□□□ -0.34
SSB-201ENST00000260956 LINC00467Q9BRT7 94 aa12.9□□□□□ -0.34
SSB-201ENST00000260956 MRPL35Q9NZE8 188 aaKnown RBP12.9□□□□□ -0.34
SSB-201ENST00000260956 TRAV25A0A0B4J276 109 aa12.89□□□□□ -0.35
SSB-201ENST00000260956 M0QY20 66 aa12.89□□□□□ -0.35
SSB-201ENST00000260956 DPM2O94777 84 aa12.89□□□□□ -0.35
SSB-201ENST00000260956 IGKCP01834 107 aa12.89□□□□□ -0.35
SSB-201ENST00000260956 PRSS1P07477 247 aa12.89□□□□□ -0.35
SSB-201ENST00000260956 ODF3L2Q3SX64 289 aa12.89□□□□□ -0.35
SSB-201ENST00000260956 SYT8Q8NBV8 401 aa12.89□□□□□ -0.35
SSB-201ENST00000260956 EDA2RQ9HAV5 297 aa12.89□□□□□ -0.35
SSB-201ENST00000260956 GAGE1Q13065 139 aa12.88□□□□□ -0.35
SSB-201ENST00000260956 NEGR1Q7Z3B1 354 aa12.88□□□□□ -0.35
SSB-201ENST00000260956 PCP2Q8IVA1 136 aa12.88□□□□□ -0.35
SSB-201ENST00000260956 NEXN-AS1Q8NBZ9 246 aa12.88□□□□□ -0.35
SSB-201ENST00000260956 DYNLRB2Q8TF09 96 aa12.88□□□□□ -0.35
SSB-201ENST00000260956 TRBV27A0A0K0K1C4 114 aa12.88□□□□□ -0.35
SSB-201ENST00000260956 ZNF25P17030 456 aaPredicted RBP12.88□□□□□ -0.35
SSB-201ENST00000260956 C2orf66Q6UXQ4 117 aa12.88□□□□□ -0.35
SSB-201ENST00000260956 NACAE9PAV3 2078 aa12.87□□□□□ -0.35
SSB-201ENST00000260956 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.87□□□□□ -0.35
SSB-201ENST00000260956 CCL24O00175 119 aa12.87□□□□□ -0.35
SSB-201ENST00000260956 SIVA1O15304 175 aa12.87□□□□□ -0.35
SSB-201ENST00000260956 UFSP1Q6NVU6 142 aa12.87□□□□□ -0.35
SSB-201ENST00000260956 PTH2Q96A98 100 aa12.87□□□□□ -0.35
SSB-201ENST00000260956 TSHBP01222 138 aa12.85□□□□□ -0.35
SSB-201ENST00000260956 PIK3CD-AS1Q5SR53 167 aa12.85□□□□□ -0.35
SSB-201ENST00000260956 BAALCQ8WXS3 180 aa12.85□□□□□ -0.35
SSB-201ENST00000260956 SCGB3A1Q96QR1 104 aa12.85□□□□□ -0.35
SSB-201ENST00000260956 F8VRH5 84 aa12.85□□□□□ -0.35
SSB-201ENST00000260956 G0S2P27469 103 aa12.85□□□□□ -0.35
SSB-201ENST00000260956 ZNF876PQ49A33 203 aa12.85□□□□□ -0.35
SSB-201ENST00000260956 ZFP2Q6ZN57 461 aa12.85□□□□□ -0.35
SSB-201ENST00000260956 C11orf72Q8NBR9 251 aa12.85□□□□□ -0.35
SSB-201ENST00000260956 SDHAF1A6NFY7 115 aa12.84□□□□□ -0.35
SSB-201ENST00000260956 CBY3A6NI87 242 aa12.84□□□□□ -0.35
SSB-201ENST00000260956 IGIPA6NJ69 53 aa12.84□□□□□ -0.35
SSB-201ENST00000260956 Q6ZVH6 145 aa12.84□□□□□ -0.35
SSB-201ENST00000260956 ERASQ7Z444 233 aa12.84□□□□□ -0.35
SSB-201ENST00000260956 ORAOV1Q8WV07 137 aa12.84□□□□□ -0.35
SSB-201ENST00000260956 COX11Q9Y6N1 276 aa12.84□□□□□ -0.35
SSB-201ENST00000260956 VCYO14598 125 aa12.83□□□□□ -0.36
SSB-201ENST00000260956 TAX1BP3O14907 124 aa12.83□□□□□ -0.36
SSB-201ENST00000260956 PLNP26678 52 aa12.83□□□□□ -0.36
SSB-201ENST00000260956 TCTAP57738 103 aa12.83□□□□□ -0.36
SSB-201ENST00000260956 ZC2HC1BQ5TFG8 222 aa12.83□□□□□ -0.36
SSB-201ENST00000260956 H7C1H1 209 aa12.82□□□□□ -0.36
SSB-201ENST00000260956 FAM74A4Q5TZK3 123 aa12.82□□□□□ -0.36
SSB-201ENST00000260956 PRM2P04554 102 aa12.82□□□□□ -0.36
SSB-201ENST00000260956 NMUP48645 174 aa12.82□□□□□ -0.36
SSB-201ENST00000260956 ZNF56Q15929 161 aa12.82□□□□□ -0.36
SSB-201ENST00000260956 HIGD1BQ9P298 99 aa12.82□□□□□ -0.36
SSB-201ENST00000260956 F5H697 171 aa12.81□□□□□ -0.36
SSB-201ENST00000260956 NPSP0C0P6 89 aa12.81□□□□□ -0.36
SSB-201ENST00000260956 TMEM97Q5BJF2 176 aa12.81□□□□□ -0.36
SSB-201ENST00000260956 TRPT1Q86TN4 253 aaKnown RBP12.81□□□□□ -0.36
SSB-201ENST00000260956 GTSCR1Q86UQ5 136 aa12.81□□□□□ -0.36
SSB-201ENST00000260956 LINC00482Q8N8I6 264 aa12.81□□□□□ -0.36
SSB-201ENST00000260956 TTTY13Q9BZ97 58 aa12.81□□□□□ -0.36
SSB-201ENST00000260956 CYSLTR1Q9Y271 337 aa12.81□□□□□ -0.36
SSB-201ENST00000260956 LINC01549A6NIU2 74 aa12.8□□□□□ -0.36
SSB-201ENST00000260956 WFDC9Q8NEX5 89 aa12.8□□□□□ -0.36
SSB-201ENST00000260956 IL17DQ8TAD2 202 aa12.8□□□□□ -0.36
SSB-201ENST00000260956 TP53TG1Q9Y2A0 90 aa12.8□□□□□ -0.36
SSB-201ENST00000260956 ZNF415Q09FC8 603 aa12.79□□□□□ -0.36
SSB-201ENST00000260956 HSD52Q0P140 79 aa12.79□□□□□ -0.36
SSB-201ENST00000260956 RHOHQ15669 191 aa12.79□□□□□ -0.36
SSB-201ENST00000260956 BEAN1Q3B7T3 259 aa12.79□□□□□ -0.36
SSB-201ENST00000260956 TIMM17AQ99595 171 aa12.79□□□□□ -0.36
SSB-201ENST00000260956 CHTOPQ9Y3Y2 248 aaKnown RBP12.79□□□□□ -0.36
SSB-201ENST00000260956 PRSS29PA6NIE9 313 aa12.79□□□□□ -0.36
SSB-201ENST00000260956 M0R2P5 195 aa12.79□□□□□ -0.36
SSB-201ENST00000260956 INSP01308 110 aa12.79□□□□□ -0.36
SSB-201ENST00000260956 PF4P02776 101 aa12.79□□□□□ -0.36
SSB-201ENST00000260956 P0DMU3 169 aa12.79□□□□□ -0.36
SSB-201ENST00000260956 FAM231AP0DMU4 169 aa12.79□□□□□ -0.36
SSB-201ENST00000260956 FAM231CP0DMU5 169 aa12.79□□□□□ -0.36
SSB-201ENST00000260956 IGLV4-69A0A075B6H9 119 aa12.78□□□□□ -0.36
SSB-201ENST00000260956 RPL39P62891 51 aaKnown RBP12.78□□□□□ -0.36
SSB-201ENST00000260956 SEC11AP67812 179 aa12.78□□□□□ -0.36
SSB-201ENST00000260956 OXLD1Q5BKU9 147 aa12.78□□□□□ -0.36
SSB-201ENST00000260956 KIR2DL4Q99706 377 aa12.78□□□□□ -0.36
SSB-201ENST00000260956 G3V4G9 280 aa12.77□□□□□ -0.36
SSB-201ENST00000260956 C1orf158Q8N1D5 194 aa12.77□□□□□ -0.36
SSB-201ENST00000260956 DNAH3Q8TD57 4116 aa12.77□□□□□ -0.37
SSB-201ENST00000260956 MAPKAPK5-AS1Q8N8E1 139 aa12.76□□□□□ -0.37
SSB-201ENST00000260956 TMEM141Q96I45 108 aa12.76□□□□□ -0.37
SSB-201ENST00000260956 C19orf73Q9NVV2 129 aa12.76□□□□□ -0.37
SSB-201ENST00000260956 A8MWV9 139 aa12.76□□□□□ -0.37
SSB-201ENST00000260956 IGLV1-51P01701 117 aa12.76□□□□□ -0.37
SSB-201ENST00000260956 TRBV25-1A0A075B6N4 114 aa12.75□□□□□ -0.37
SSB-201ENST00000260956 GIG44P09565 113 aaPredicted RBP12.75□□□□□ -0.37
SSB-201ENST00000260956 CFAP126Q5VTH2 177 aa12.75□□□□□ -0.37
SSB-201ENST00000260956 Q6ZSN1 163 aa12.75□□□□□ -0.37
SSB-201ENST00000260956 FAM110AQ9BQ89 295 aa12.75□□□□□ -0.37
SSB-201ENST00000260956 OR11H12B2RN74 326 aa12.74□□□□□ -0.37
SSB-201ENST00000260956 DEFB104AQ8WTQ1 72 aa12.74□□□□□ -0.37
SSB-201ENST00000260956 SPXQ9BT56 116 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms