RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 C2CD3Q4AC94 2353 aa11.68□□□□□ -0.54
RFX1-201ENST00000254325 A0A096LNT2 108 aa11.68□□□□□ -0.54
RFX1-201ENST00000254325 TRAV12-1A0A0B4J245 112 aa11.68□□□□□ -0.54
RFX1-201ENST00000254325 CITED2Q99967 270 aaPredicted RBP11.68□□□□□ -0.54
RFX1-201ENST00000254325 GEMIN7Q9H840 131 aaKnown RBP11.68□□□□□ -0.54
RFX1-201ENST00000254325 H3BRM9 83 aa11.67□□□□□ -0.54
RFX1-201ENST00000254325 TSSC4Q9Y5U2 329 aaPredicted RBP11.67□□□□□ -0.54
RFX1-201ENST00000254325 CCL25O15444 150 aa11.67□□□□□ -0.54
RFX1-201ENST00000254325 SAMD5Q5TGI4 173 aa11.67□□□□□ -0.54
RFX1-201ENST00000254325 C2orf91Q6ZV80 131 aa11.67□□□□□ -0.54
RFX1-201ENST00000254325 IGLV2-18A0A075B6J9 118 aa11.67□□□□□ -0.54
RFX1-201ENST00000254325 TRGV2A0A075B6R0 118 aa11.67□□□□□ -0.54
RFX1-201ENST00000254325 CLUHP3Q96NS8 147 aa11.67□□□□□ -0.54
RFX1-201ENST00000254325 DEFB114Q30KQ6 69 aa11.67□□□□□ -0.54
RFX1-201ENST00000254325 MYMXA0A1B0GTQ4 84 aa11.66□□□□□ -0.54
RFX1-201ENST00000254325 APOMO95445 188 aa11.66□□□□□ -0.54
RFX1-201ENST00000254325 RHODO00212 210 aa11.66□□□□□ -0.54
RFX1-201ENST00000254325 C9orf118A6NHY6 69 aa11.65□□□□□ -0.54
RFX1-201ENST00000254325 FAM19A4Q96LR4 140 aa11.65□□□□□ -0.54
RFX1-201ENST00000254325 IGHV3-38A0A0C4DH36 116 aa11.65□□□□□ -0.54
RFX1-201ENST00000254325 GAGE12BA1L429 117 aa11.65□□□□□ -0.54
RFX1-201ENST00000254325 TMEM238C9JI98 176 aa11.64□□□□□ -0.55
RFX1-201ENST00000254325 RHOHQ15669 191 aa11.64□□□□□ -0.55
RFX1-201ENST00000254325 LYRM7Q5U5X0 104 aa11.64□□□□□ -0.55
RFX1-201ENST00000254325 PRSS2P07478 247 aa11.64□□□□□ -0.55
RFX1-201ENST00000254325 CMC4P56277 68 aaPredicted RBP11.64□□□□□ -0.55
RFX1-201ENST00000254325 K7ERJ3 54 aa11.64□□□□□ -0.55
RFX1-201ENST00000254325 PRM2P04554 102 aa11.64□□□□□ -0.55
RFX1-201ENST00000254325 RPL13AP40429 203 aaKnown RBP11.64□□□□□ -0.55
RFX1-201ENST00000254325 C9orf85Q96MD7 179 aa11.64□□□□□ -0.55
RFX1-201ENST00000254325 A0A1B0GWB2 263 aa11.64□□□□□ -0.55
RFX1-201ENST00000254325 H7C2G1 150 aa11.64□□□□□ -0.55
RFX1-201ENST00000254325 ADAMTSL5Q6ZMM2 481 aa11.64□□□□□ -0.55
RFX1-201ENST00000254325 SPXQ9BT56 116 aa11.64□□□□□ -0.55
RFX1-201ENST00000254325 ASH1LQ9NR48 2969 aaKnown RBP11.63□□□□□ -0.55
RFX1-201ENST00000254325 CEND1Q8N111 149 aa11.63□□□□□ -0.55
RFX1-201ENST00000254325 NEXN-AS1Q8NBZ9 246 aa11.63□□□□□ -0.55
RFX1-201ENST00000254325 ZNF479Q96JC4 524 aa11.63□□□□□ -0.55
RFX1-201ENST00000254325 FSHBP01225 129 aa11.63□□□□□ -0.55
RFX1-201ENST00000254325 SFTA2Q6UW10 78 aa11.63□□□□□ -0.55
RFX1-201ENST00000254325 AZU1P20160 251 aa11.62□□□□□ -0.55
RFX1-201ENST00000254325 FXYD2P54710 66 aa11.62□□□□□ -0.55
RFX1-201ENST00000254325 UBE2L6O14933 153 aa11.62□□□□□ -0.55
RFX1-201ENST00000254325 ZNF575Q86XF7 245 aa11.62□□□□□ -0.55
RFX1-201ENST00000254325 BSNQ9UPA5 3926 aa11.62□□□□□ -0.55
RFX1-201ENST00000254325 FGF6P10767 208 aa11.62□□□□□ -0.55
RFX1-201ENST00000254325 CST9LQ9H4G1 147 aa11.62□□□□□ -0.55
RFX1-201ENST00000254325 HHLA3Q9XRX5 114 aa11.62□□□□□ -0.55
RFX1-201ENST00000254325 M0QY20 66 aa11.62□□□□□ -0.55
RFX1-201ENST00000254325 P0DMU3 169 aa11.62□□□□□ -0.55
RFX1-201ENST00000254325 FAM231AP0DMU4 169 aa11.62□□□□□ -0.55
RFX1-201ENST00000254325 FAM231CP0DMU5 169 aa11.62□□□□□ -0.55
RFX1-201ENST00000254325 HIGD1BQ9P298 99 aa11.62□□□□□ -0.55
RFX1-201ENST00000254325 C11orf86A6NJI1 115 aa11.61□□□□□ -0.55
RFX1-201ENST00000254325 OCIAD2Q56VL3 154 aa11.61□□□□□ -0.55
RFX1-201ENST00000254325 GTSF1LQ9H1H1 148 aa11.61□□□□□ -0.55
RFX1-201ENST00000254325 RNASE13Q5GAN3 156 aaKnown RBP11.61□□□□□ -0.55
RFX1-201ENST00000254325 OPRPNQ99935 248 aaPredicted RBP11.61□□□□□ -0.55
RFX1-201ENST00000254325 CRYGDP07320 174 aa11.61□□□□□ -0.55
RFX1-201ENST00000254325 RPL36AP83881 106 aaKnown RBP11.61□□□□□ -0.55
RFX1-201ENST00000254325 RPL36ALQ969Q0 106 aaKnown RBP11.61□□□□□ -0.55
RFX1-201ENST00000254325 POLR2KP53803 58 aaKnown RBP11.6□□□□□ -0.55
RFX1-201ENST00000254325 RNF152Q8N8N0 203 aa11.6□□□□□ -0.55
RFX1-201ENST00000254325 TIMM17AQ99595 171 aa11.6□□□□□ -0.55
RFX1-201ENST00000254325 TRAV25A0A0B4J276 109 aa11.6□□□□□ -0.55
RFX1-201ENST00000254325 K7EP13 123 aa11.6□□□□□ -0.55
RFX1-201ENST00000254325 ZNRF2Q8NHG8 242 aa11.6□□□□□ -0.55
RFX1-201ENST00000254325 NXPH4O95158 308 aa11.59□□□□□ -0.55
RFX1-201ENST00000254325 MAPKAPK5-AS1Q8N8E1 139 aa11.59□□□□□ -0.55
RFX1-201ENST00000254325 TRAV2A0A0B4J234 112 aa11.59□□□□□ -0.55
RFX1-201ENST00000254325 TRGV4A0A0C4DH28 118 aa11.59□□□□□ -0.55
RFX1-201ENST00000254325 LINC01546A6NGU7 62 aa11.59□□□□□ -0.55
RFX1-201ENST00000254325 OR5A1Q8NGJ0 315 aa11.59□□□□□ -0.55
RFX1-201ENST00000254325 SIGMAR1Q99720 223 aa11.59□□□□□ -0.55
RFX1-201ENST00000254325 IGKV3OR2-268A0A0C4DH90 116 aa11.58□□□□□ -0.56
RFX1-201ENST00000254325 PROK1P58294 105 aa11.58□□□□□ -0.56
RFX1-201ENST00000254325 C1QTNF4Q9BXJ3 329 aa11.58□□□□□ -0.56
RFX1-201ENST00000254325 E9PLD3 99 aa11.58□□□□□ -0.56
RFX1-201ENST00000254325 TAL2Q16559 108 aa11.58□□□□□ -0.56
RFX1-201ENST00000254325 TRBV27A0A0K0K1C4 114 aa11.58□□□□□ -0.56
RFX1-201ENST00000254325 PLA2G2AP14555 144 aa11.58□□□□□ -0.56
RFX1-201ENST00000254325 C20orf203Q8NBC4 194 aa11.58□□□□□ -0.56
RFX1-201ENST00000254325 ZMAT4Q9H898 229 aa11.58□□□□□ -0.56
RFX1-201ENST00000254325 KIF25-AS1Q9Y6Z4 181 aa11.57□□□□□ -0.56
RFX1-201ENST00000254325 LINC01006Q8NI28 216 aa11.57□□□□□ -0.56
RFX1-201ENST00000254325 PLEKHB2Q96CS7 222 aa11.57□□□□□ -0.56
RFX1-201ENST00000254325 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.57□□□□□ -0.56
RFX1-201ENST00000254325 A0A0J9YXV3 536 aa11.57□□□□□ -0.56
RFX1-201ENST00000254325 TRBV6-5A0A0K0K1A5 114 aa11.57□□□□□ -0.56
RFX1-201ENST00000254325 A0A1W2PPM0 123 aa11.57□□□□□ -0.56
RFX1-201ENST00000254325 IGKV2-29A2NJV5 120 aaPredicted RBP11.57□□□□□ -0.56
RFX1-201ENST00000254325 J3QQQ9 107 aa11.57□□□□□ -0.56
RFX1-201ENST00000254325 RBX1P62877 108 aa11.57□□□□□ -0.56
RFX1-201ENST00000254325 AMTNQ6UX39 209 aa11.57□□□□□ -0.56
RFX1-201ENST00000254325 Q8N2B8 174 aa11.56□□□□□ -0.56
RFX1-201ENST00000254325 GAGE12JA6NER3 117 aa11.56□□□□□ -0.56
RFX1-201ENST00000254325 RPL32P62910 135 aaKnown RBP11.56□□□□□ -0.56
RFX1-201ENST00000254325 GAGE4Q13068 117 aa11.56□□□□□ -0.56
RFX1-201ENST00000254325 GAGE5Q13069 117 aa11.56□□□□□ -0.56
RFX1-201ENST00000254325 GAGE13Q4V321 117 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms